RNA–Protein interactions for RNA: ENST00000282701.2

BMP3-201, Transcript of bone morphogenetic protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BMP3, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3-201ENST00000282701 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.04
BMP3-201ENST00000282701 SUPT5HO00267 1087 aaKnown RBP26.71■■□□□ 1.87
BMP3-201ENST00000282701 PELP1Q8IZL8 1130 aaKnown RBP26.47■■□□□ 1.83
BMP3-201ENST00000282701 EHMT2Q96KQ7 1210 aa26.03■■□□□ 1.76
BMP3-201ENST00000282701 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
BMP3-201ENST00000282701 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
BMP3-201ENST00000282701 APLP2Q06481 763 aa25.7■■□□□ 1.71
BMP3-201ENST00000282701 ERICH6Q7L0X2 663 aa25.4■■□□□ 1.66
BMP3-201ENST00000282701 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
BMP3-201ENST00000282701 CENPBP07199 599 aaPredicted RBP25.35■■□□□ 1.65
BMP3-201ENST00000282701 FAM9AQ8IZU1 332 aaPredicted RBP25.26■■□□□ 1.63
BMP3-201ENST00000282701 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
BMP3-201ENST00000282701 TTBK1Q5TCY1 1321 aaPredicted RBP25.25■■□□□ 1.63
BMP3-201ENST00000282701 ZEB1P37275 1124 aaPredicted RBP25.15■■□□□ 1.62
BMP3-201ENST00000282701 MYT1Q01538 1121 aa24.93■■□□□ 1.58
BMP3-201ENST00000282701 NEFLP07196 543 aa24.8■■□□□ 1.56
BMP3-201ENST00000282701 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
BMP3-201ENST00000282701 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
BMP3-201ENST00000282701 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
BMP3-201ENST00000282701 ATP1B4Q9UN42 357 aaPredicted RBP24.62■■□□□ 1.53
BMP3-201ENST00000282701 UBTFP17480 764 aaKnown RBP24.49■■□□□ 1.51
BMP3-201ENST00000282701 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
BMP3-201ENST00000282701 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
BMP3-201ENST00000282701 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
BMP3-201ENST00000282701 HRCP23327 699 aa24.08■■□□□ 1.45
BMP3-201ENST00000282701 POLR3GLQ9BT43 218 aa23.89■■□□□ 1.41
BMP3-201ENST00000282701 ITGAEP38570 1179 aa23.84■■□□□ 1.41
BMP3-201ENST00000282701 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
BMP3-201ENST00000282701 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
BMP3-201ENST00000282701 MYT1LQ9UL68 1186 aa23.64■■□□□ 1.37
BMP3-201ENST00000282701 CNGB1Q14028 1251 aaPredicted RBP23.64■■□□□ 1.37
BMP3-201ENST00000282701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
BMP3-201ENST00000282701 ZNF316A6NFI3 1004 aaPredicted RBP23.62■■□□□ 1.37
BMP3-201ENST00000282701 LOC105371045A0A1W2PR82 267 aa23.61■■□□□ 1.37
BMP3-201ENST00000282701 DIEXFQ68CQ4 756 aaKnown RBP23.55■■□□□ 1.36
BMP3-201ENST00000282701 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
BMP3-201ENST00000282701 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
BMP3-201ENST00000282701 SLC4A1APQ9BWU0 796 aaKnown RBP23.39■■□□□ 1.33
BMP3-201ENST00000282701 BCANQ96GW7 911 aa23.23■■□□□ 1.31
BMP3-201ENST00000282701 GTF3C3Q9Y5Q9 886 aa23.23■■□□□ 1.31
BMP3-201ENST00000282701 FAM50AQ14320 339 aaKnown RBP23.18■■□□□ 1.3
BMP3-201ENST00000282701 CDK11AQ9UQ88 783 aaPredicted RBP23.16■■□□□ 1.3
BMP3-201ENST00000282701 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
BMP3-201ENST00000282701 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
BMP3-201ENST00000282701 ANP32CO43423 234 aa23.09■■□□□ 1.29
BMP3-201ENST00000282701 ZBTB47Q9UFB7 747 aaPredicted RBP22.98■■□□□ 1.27
BMP3-201ENST00000282701 ZNF326Q5BKZ1 582 aaKnown RBP22.89■■□□□ 1.25
BMP3-201ENST00000282701 CANXP27824 592 aaKnown RBP22.84■■□□□ 1.25
BMP3-201ENST00000282701 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.24
BMP3-201ENST00000282701 ANP32AP39687 249 aaKnown RBP22.82■■□□□ 1.24
BMP3-201ENST00000282701 BCL11AQ9H165 835 aa22.69■■□□□ 1.22
BMP3-201ENST00000282701 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
BMP3-201ENST00000282701 NEFMP07197 916 aa22.62■■□□□ 1.21
BMP3-201ENST00000282701 SLC24A1O60721 1099 aa22.61■■□□□ 1.21
BMP3-201ENST00000282701 EIF5BO60841 1220 aaKnown RBP22.56■■□□□ 1.2
BMP3-201ENST00000282701 ANP32BQ92688 251 aaKnown RBP22.54■■□□□ 1.2
BMP3-201ENST00000282701 FKBP8Q14318 412 aa22.51■■□□□ 1.19
BMP3-201ENST00000282701 HSP90AA1P07900 732 aaKnown RBP22.41■■□□□ 1.18
BMP3-201ENST00000282701 ABCC9O60706 1549 aa22.38■■□□□ 1.17
BMP3-201ENST00000282701 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
BMP3-201ENST00000282701 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
BMP3-201ENST00000282701 GLIPR1L2Q4G1C9 344 aa22.36■■□□□ 1.17
BMP3-201ENST00000282701 FBLN2P98095 1184 aa22.35■■□□□ 1.17
BMP3-201ENST00000282701 HNRNPUQ00839 825 aaKnown RBP eCLIP22.34■■□□□ 1.17
BMP3-201ENST00000282701 P3H3Q8IVL6 736 aa22.34■■□□□ 1.17
BMP3-201ENST00000282701 CSRNP3Q8WYN3 585 aa22.3■■□□□ 1.16
BMP3-201ENST00000282701 TONSLQ96HA7 1378 aa22.29■■□□□ 1.16
BMP3-201ENST00000282701 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
BMP3-201ENST00000282701 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
BMP3-201ENST00000282701 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
BMP3-201ENST00000282701 NBR1Q14596 966 aa22.23■■□□□ 1.15
BMP3-201ENST00000282701 DDX10Q13206 875 aaKnown RBP22.21■■□□□ 1.15
BMP3-201ENST00000282701 CCDC136Q96JN2 1154 aa22.2■■□□□ 1.14
BMP3-201ENST00000282701 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.13■■□□□ 1.13
BMP3-201ENST00000282701 SALL2Q9Y467 1007 aaPredicted RBP22.12■■□□□ 1.13
BMP3-201ENST00000282701 TMC1Q8TDI8 760 aa22.08■■□□□ 1.13
BMP3-201ENST00000282701 ARXQ96QS3 562 aa22.08■■□□□ 1.13
BMP3-201ENST00000282701 DCAF1Q9Y4B6 1507 aa22.08■■□□□ 1.12
BMP3-201ENST00000282701 CHGAP10645 457 aaKnown RBP22.03■■□□□ 1.12
BMP3-201ENST00000282701 WDR43Q15061 677 aaKnown RBP eCLIP22■■□□□ 1.11
BMP3-201ENST00000282701 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
BMP3-201ENST00000282701 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
BMP3-201ENST00000282701 STAG3Q9UJ98 1225 aa21.96■■□□□ 1.11
BMP3-201ENST00000282701 ESF1Q9H501 851 aaKnown RBP21.96■■□□□ 1.11
BMP3-201ENST00000282701 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
BMP3-201ENST00000282701 MIER1Q8N108 512 aa21.91■■□□□ 1.1
BMP3-201ENST00000282701 DDRGK1Q96HY6 314 aa21.88■■□□□ 1.09
BMP3-201ENST00000282701 CHIC2Q9UKJ5 165 aa21.86■■□□□ 1.09
BMP3-201ENST00000282701 MYH16Q9H6N6 1097 aa21.86■■□□□ 1.09
BMP3-201ENST00000282701 BECN1Q14457 450 aa21.84■■□□□ 1.09
BMP3-201ENST00000282701 TRIM44Q96DX7 344 aaPredicted RBP21.81■■□□□ 1.08
BMP3-201ENST00000282701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.08
BMP3-201ENST00000282701 ANP32EQ9BTT0 268 aa21.79■■□□□ 1.08
BMP3-201ENST00000282701 KDM2AQ9Y2K7 1162 aa21.78■■□□□ 1.08
BMP3-201ENST00000282701 NCLP19338 710 aaKnown RBP21.75■■□□□ 1.07
BMP3-201ENST00000282701 GOLGA6L22H0YM25 854 aa21.73■■□□□ 1.07
BMP3-201ENST00000282701 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
BMP3-201ENST00000282701 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
BMP3-201ENST00000282701 CDK11BP21127 795 aaKnown RBP21.73■■□□□ 1.07
BMP3-201ENST00000282701 TSPY4P0CV99 314 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms