RNA–Protein interactions for RNA: ENST00000268138.11

TICRR-201, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TICRR, Length 6,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-201ENST00000268138 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
TICRR-201ENST00000268138 EHMT2Q96KQ7 1210 aa23.06■■□□□ 1.28
TICRR-201ENST00000268138 SUPT5HO00267 1087 aaKnown RBP22.92■■□□□ 1.26
TICRR-201ENST00000268138 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
TICRR-201ENST00000268138 FAM9AQ8IZU1 332 aaPredicted RBP22.18■■□□□ 1.14
TICRR-201ENST00000268138 RANGAP1P46060 587 aaPredicted RBP22.17■■□□□ 1.14
TICRR-201ENST00000268138 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
TICRR-201ENST00000268138 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
TICRR-201ENST00000268138 ATP1B4Q9UN42 357 aaPredicted RBP22■■□□□ 1.11
TICRR-201ENST00000268138 APLP2Q06481 763 aa21.96■■□□□ 1.11
TICRR-201ENST00000268138 PELP1Q8IZL8 1130 aaKnown RBP21.68■■□□□ 1.06
TICRR-201ENST00000268138 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
TICRR-201ENST00000268138 CHIC1Q5VXU3 224 aa21.46■■□□□ 1.03
TICRR-201ENST00000268138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
TICRR-201ENST00000268138 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
TICRR-201ENST00000268138 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
TICRR-201ENST00000268138 PCGF6Q9BYE7 350 aa21.13■□□□□ 0.97
TICRR-201ENST00000268138 ERICH6Q7L0X2 663 aa21.03■□□□□ 0.96
TICRR-201ENST00000268138 TRIM41Q8WV44 630 aa21.02■□□□□ 0.95
TICRR-201ENST00000268138 CENPBP07199 599 aaPredicted RBP20.91■□□□□ 0.94
TICRR-201ENST00000268138 PABPN1Q86U42 306 aaKnown RBP eCLIP20.83■□□□□ 0.93
TICRR-201ENST00000268138 PPARGC1BQ86YN6 1023 aaKnown RBP20.78■□□□□ 0.92
TICRR-201ENST00000268138 POLR3GLQ9BT43 218 aa20.77■□□□□ 0.92
TICRR-201ENST00000268138 SLC4A1APQ9BWU0 796 aaKnown RBP20.75■□□□□ 0.91
TICRR-201ENST00000268138 ITGAEP38570 1179 aa20.74■□□□□ 0.91
TICRR-201ENST00000268138 FBLN2P98095 1184 aa20.72■□□□□ 0.91
TICRR-201ENST00000268138 MYT1Q01538 1121 aa20.69■□□□□ 0.9
TICRR-201ENST00000268138 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
TICRR-201ENST00000268138 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
TICRR-201ENST00000268138 ABCC9O60706 1549 aa20.66■□□□□ 0.9
TICRR-201ENST00000268138 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
TICRR-201ENST00000268138 YTHDC1Q96MU7 727 aaKnown RBP20.62■□□□□ 0.89
TICRR-201ENST00000268138 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
TICRR-201ENST00000268138 BCANQ96GW7 911 aa20.4■□□□□ 0.86
TICRR-201ENST00000268138 NEFLP07196 543 aa20.38■□□□□ 0.85
TICRR-201ENST00000268138 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
TICRR-201ENST00000268138 SLC24A1O60721 1099 aa20.2■□□□□ 0.82
TICRR-201ENST00000268138 HRCP23327 699 aa20.05■□□□□ 0.8
TICRR-201ENST00000268138 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
TICRR-201ENST00000268138 TRIM52Q96A61 297 aa20.03■□□□□ 0.8
TICRR-201ENST00000268138 ESF1Q9H501 851 aaKnown RBP20.02■□□□□ 0.8
TICRR-201ENST00000268138 ZNF326Q5BKZ1 582 aaKnown RBP19.94■□□□□ 0.78
TICRR-201ENST00000268138 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
TICRR-201ENST00000268138 BCL11AQ9H165 835 aa19.91■□□□□ 0.78
TICRR-201ENST00000268138 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
TICRR-201ENST00000268138 DAXXQ9UER7 740 aaPredicted RBP19.87■□□□□ 0.77
TICRR-201ENST00000268138 ZNF777Q9ULD5 760 aaPredicted RBP19.84■□□□□ 0.77
TICRR-201ENST00000268138 NPM1P06748 294 aaKnown RBP eCLIP19.81■□□□□ 0.76
TICRR-201ENST00000268138 SCAF1Q9H7N4 1312 aaKnown RBP19.8■□□□□ 0.76
TICRR-201ENST00000268138 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
TICRR-201ENST00000268138 PLEKHG5O94827 1062 aa19.78■□□□□ 0.76
TICRR-201ENST00000268138 A0A0G2JS52 829 aa19.76■□□□□ 0.75
TICRR-201ENST00000268138 LOC105371045A0A1W2PR82 267 aa19.76■□□□□ 0.75
TICRR-201ENST00000268138 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
TICRR-201ENST00000268138 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
TICRR-201ENST00000268138 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
TICRR-201ENST00000268138 CLSPNQ9HAW4 1339 aa19.59■□□□□ 0.73
TICRR-201ENST00000268138 TRHP20396 242 aaPredicted RBP19.58■□□□□ 0.72
TICRR-201ENST00000268138 RTL5Q5HYW3 569 aaPredicted RBP19.58■□□□□ 0.72
TICRR-201ENST00000268138 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
TICRR-201ENST00000268138 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
TICRR-201ENST00000268138 GTF3C3Q9Y5Q9 886 aa19.47■□□□□ 0.71
TICRR-201ENST00000268138 ARID4BQ4LE39 1312 aaPredicted RBP19.47■□□□□ 0.71
TICRR-201ENST00000268138 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
TICRR-201ENST00000268138 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
TICRR-201ENST00000268138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.4■□□□□ 0.74e-9■■■■□ 21.5
TICRR-201ENST00000268138 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
TICRR-201ENST00000268138 NEFMP07197 916 aa19.39■□□□□ 0.69
TICRR-201ENST00000268138 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
TICRR-201ENST00000268138 KCNH8Q96L42 1107 aa19.31■□□□□ 0.68
TICRR-201ENST00000268138 HAP1P54257 671 aaPredicted RBP19.29■□□□□ 0.68
TICRR-201ENST00000268138 CANXP27824 592 aaKnown RBP19.28■□□□□ 0.68
TICRR-201ENST00000268138 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
TICRR-201ENST00000268138 SCRIBQ14160 1630 aa19.24■□□□□ 0.67
TICRR-201ENST00000268138 PPP1R15AO75807 674 aaPredicted RBP19.14■□□□□ 0.66
TICRR-201ENST00000268138 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
TICRR-201ENST00000268138 CHIC2Q9UKJ5 165 aa19.1■□□□□ 0.65
TICRR-201ENST00000268138 ARXQ96QS3 562 aa19.07■□□□□ 0.64
TICRR-201ENST00000268138 LMOD2Q6P5Q4 547 aa19.04■□□□□ 0.64
TICRR-201ENST00000268138 ACIN1Q9UKV3 1341 aaKnown RBP19.04■□□□□ 0.64
TICRR-201ENST00000268138 NPM2Q86SE8 214 aaKnown RBP19.01■□□□□ 0.63
TICRR-201ENST00000268138 MLECQ14165 292 aa19.01■□□□□ 0.63
TICRR-201ENST00000268138 AEBP2Q6ZN18 517 aaPredicted RBP18.99■□□□□ 0.63
TICRR-201ENST00000268138 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
TICRR-201ENST00000268138 ANP32CO43423 234 aa18.94■□□□□ 0.62
TICRR-201ENST00000268138 EIF5BO60841 1220 aaKnown RBP18.94■□□□□ 0.62
TICRR-201ENST00000268138 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
TICRR-201ENST00000268138 NPHP1O15259 732 aa18.87■□□□□ 0.61
TICRR-201ENST00000268138 TSPY4P0CV99 314 aa18.86■□□□□ 0.61
TICRR-201ENST00000268138 TSPY10P0CW01 314 aa18.86■□□□□ 0.61
TICRR-201ENST00000268138 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
TICRR-201ENST00000268138 ANP32AP39687 249 aaKnown RBP18.82■□□□□ 0.6
TICRR-201ENST00000268138 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
TICRR-201ENST00000268138 TULP1O00294 542 aaPredicted RBP18.73■□□□□ 0.59
TICRR-201ENST00000268138 FKBP8Q14318 412 aa18.73■□□□□ 0.59
TICRR-201ENST00000268138 PPM1GO15355 546 aaPredicted RBP18.72■□□□□ 0.59
TICRR-201ENST00000268138 PLEKHD1A6NEE1 506 aa18.7■□□□□ 0.58
TICRR-201ENST00000268138 RGL3Q3MIN7 710 aa18.69■□□□□ 0.58
TICRR-201ENST00000268138 NBR1Q14596 966 aa18.65■□□□□ 0.58
TICRR-201ENST00000268138 RRP7BPQ9NSQ0 103 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms