RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
NEO1-201ENST00000261908 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
NEO1-201ENST00000261908 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
NEO1-201ENST00000261908 PELP1Q8IZL8 1130 aaKnown RBP26.24■■□□□ 1.79
NEO1-201ENST00000261908 SHROOM4Q9ULL8 1493 aa25.96■■□□□ 1.75
NEO1-201ENST00000261908 TTBK1Q5TCY1 1321 aaPredicted RBP25.73■■□□□ 1.71
NEO1-201ENST00000261908 ERICH6Q7L0X2 663 aa25.62■■□□□ 1.69
NEO1-201ENST00000261908 PCGF6Q9BYE7 350 aa25.44■■□□□ 1.66
NEO1-201ENST00000261908 APLP2Q06481 763 aa25.41■■□□□ 1.66
NEO1-201ENST00000261908 FAM9AQ8IZU1 332 aaPredicted RBP25.36■■□□□ 1.65
NEO1-201ENST00000261908 CENPBP07199 599 aaPredicted RBP25.14■■□□□ 1.62
NEO1-201ENST00000261908 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
NEO1-201ENST00000261908 CCER1Q8TC90 406 aaPredicted RBP25.09■■□□□ 1.61
NEO1-201ENST00000261908 YTHDC1Q96MU7 727 aaKnown RBP25.05■■□□□ 1.6
NEO1-201ENST00000261908 MYT1Q01538 1121 aa24.99■■□□□ 1.59
NEO1-201ENST00000261908 ATP1B4Q9UN42 357 aaPredicted RBP24.79■■□□□ 1.56
NEO1-201ENST00000261908 NEFLP07196 543 aa24.71■■□□□ 1.55
NEO1-201ENST00000261908 ZEB1P37275 1124 aaPredicted RBP24.6■■□□□ 1.53
NEO1-201ENST00000261908 PPARGC1BQ86YN6 1023 aaKnown RBP24.55■■□□□ 1.52
NEO1-201ENST00000261908 NISCHQ9Y2I1 1504 aa24.5■■□□□ 1.51
NEO1-201ENST00000261908 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
NEO1-201ENST00000261908 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
NEO1-201ENST00000261908 DAXXQ9UER7 740 aaPredicted RBP24.25■■□□□ 1.47
NEO1-201ENST00000261908 CNGB1Q14028 1251 aaPredicted RBP24.22■■□□□ 1.47
NEO1-201ENST00000261908 POLR3GLQ9BT43 218 aa24.18■■□□□ 1.46
NEO1-201ENST00000261908 CHIC1Q5VXU3 224 aa24.05■■□□□ 1.44
NEO1-201ENST00000261908 ITGAEP38570 1179 aa23.99■■□□□ 1.43
NEO1-201ENST00000261908 HRCP23327 699 aa23.92■■□□□ 1.42
NEO1-201ENST00000261908 TRIM26Q12899 539 aaPredicted RBP23.81■■□□□ 1.4
NEO1-201ENST00000261908 MYT1LQ9UL68 1186 aa23.74■■□□□ 1.39
NEO1-201ENST00000261908 ZNF316A6NFI3 1004 aaPredicted RBP23.7■■□□□ 1.38
NEO1-201ENST00000261908 RTL5Q5HYW3 569 aaPredicted RBP23.7■■□□□ 1.38
NEO1-201ENST00000261908 HNRNPUL2Q1KMD3 747 aaKnown RBP23.68■■□□□ 1.38
NEO1-201ENST00000261908 SLC4A1APQ9BWU0 796 aaKnown RBP23.65■■□□□ 1.38
NEO1-201ENST00000261908 CLSPNQ9HAW4 1339 aa23.64■■□□□ 1.37
NEO1-201ENST00000261908 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
NEO1-201ENST00000261908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.36
NEO1-201ENST00000261908 BCANQ96GW7 911 aa23.57■■□□□ 1.36
NEO1-201ENST00000261908 DIEXFQ68CQ4 756 aaKnown RBP23.46■■□□□ 1.35
NEO1-201ENST00000261908 BCL11AQ9H165 835 aa23.33■■□□□ 1.32
NEO1-201ENST00000261908 GTF3C3Q9Y5Q9 886 aa23.31■■□□□ 1.32
NEO1-201ENST00000261908 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
NEO1-201ENST00000261908 CDK11AQ9UQ88 783 aaPredicted RBP23.08■■□□□ 1.29
NEO1-201ENST00000261908 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
NEO1-201ENST00000261908 EIF5BO60841 1220 aaKnown RBP23■■□□□ 1.27
NEO1-201ENST00000261908 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
NEO1-201ENST00000261908 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
NEO1-201ENST00000261908 ZNF326Q5BKZ1 582 aaKnown RBP22.95■■□□□ 1.26
NEO1-201ENST00000261908 NPM2Q86SE8 214 aaKnown RBP22.93■■□□□ 1.26
NEO1-201ENST00000261908 PLPPR3Q6T4P5 718 aa22.91■■□□□ 1.26
NEO1-201ENST00000261908 ZBTB47Q9UFB7 747 aaPredicted RBP22.89■■□□□ 1.25
NEO1-201ENST00000261908 ANP32CO43423 234 aa22.87■■□□□ 1.25
NEO1-201ENST00000261908 CANXP27824 592 aaKnown RBP22.83■■□□□ 1.24
NEO1-201ENST00000261908 ANP32AP39687 249 aaKnown RBP22.72■■□□□ 1.23
NEO1-201ENST00000261908 ACIN1Q9UKV3 1341 aaKnown RBP22.63■■□□□ 1.21
NEO1-201ENST00000261908 ARXQ96QS3 562 aa22.63■■□□□ 1.21
NEO1-201ENST00000261908 NBR1Q14596 966 aa22.59■■□□□ 1.21
NEO1-201ENST00000261908 FBLN2P98095 1184 aa22.56■■□□□ 1.2
NEO1-201ENST00000261908 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
NEO1-201ENST00000261908 FKBP8Q14318 412 aa22.55■■□□□ 1.2
NEO1-201ENST00000261908 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
NEO1-201ENST00000261908 HSP90AA1P07900 732 aaKnown RBP22.47■■□□□ 1.19
NEO1-201ENST00000261908 ANP32BQ92688 251 aaKnown RBP22.46■■□□□ 1.19
NEO1-201ENST00000261908 SALL2Q9Y467 1007 aaPredicted RBP22.43■■□□□ 1.18
NEO1-201ENST00000261908 NEFMP07197 916 aa22.38■■□□□ 1.17
NEO1-201ENST00000261908 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
NEO1-201ENST00000261908 GLIPR1L2Q4G1C9 344 aa22.32■■□□□ 1.16
NEO1-201ENST00000261908 P3H3Q8IVL6 736 aa22.3■■□□□ 1.16
NEO1-201ENST00000261908 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
NEO1-201ENST00000261908 HNRNPUQ00839 825 aaKnown RBP eCLIP22.26■■□□□ 1.15
NEO1-201ENST00000261908 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
NEO1-201ENST00000261908 IRX6P78412 446 aaPredicted RBP22.22■■□□□ 1.15
NEO1-201ENST00000261908 UPF2Q9HAU5 1272 aaKnown RBP22.19■■□□□ 1.14
NEO1-201ENST00000261908 DDX10Q13206 875 aaKnown RBP22.16■■□□□ 1.14
NEO1-201ENST00000261908 ZNF777Q9ULD5 760 aaPredicted RBP22.15■■□□□ 1.14
NEO1-201ENST00000261908 CCDC136Q96JN2 1154 aa22.1■■□□□ 1.13
NEO1-201ENST00000261908 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
NEO1-201ENST00000261908 CHGAP10645 457 aaKnown RBP22.03■■□□□ 1.12
NEO1-201ENST00000261908 ABCC9O60706 1549 aa22.01■■□□□ 1.11
NEO1-201ENST00000261908 SENP3-EIF4A1A0A087X0R7 540 aa21.97■■□□□ 1.11
NEO1-201ENST00000261908 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
NEO1-201ENST00000261908 A0A0G2JS52 829 aa21.94■■□□□ 1.1
NEO1-201ENST00000261908 TPRNQ4KMQ1 711 aa21.94■■□□□ 1.1
NEO1-201ENST00000261908 RTN4Q9NQC3 1192 aaKnown RBP21.93■■□□□ 1.1
NEO1-201ENST00000261908 TMC1Q8TDI8 760 aa21.92■■□□□ 1.1
NEO1-201ENST00000261908 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
NEO1-201ENST00000261908 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.87■■□□□ 1.09
NEO1-201ENST00000261908 STAG3Q9UJ98 1225 aa21.83■■□□□ 1.09
NEO1-201ENST00000261908 MIER1Q8N108 512 aa21.82■■□□□ 1.08
NEO1-201ENST00000261908 TRIM44Q96DX7 344 aaPredicted RBP21.82■■□□□ 1.08
NEO1-201ENST00000261908 WDR43Q15061 677 aaKnown RBP eCLIP21.79■■□□□ 1.08
NEO1-201ENST00000261908 KDM2AQ9Y2K7 1162 aa21.79■■□□□ 1.08
NEO1-201ENST00000261908 MRS2Q9HD23 443 aa21.79■■□□□ 1.08
NEO1-201ENST00000261908 NCLP19338 710 aaKnown RBP21.78■■□□□ 1.08
NEO1-201ENST00000261908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.77■■□□□ 1.08
NEO1-201ENST00000261908 CHIC2Q9UKJ5 165 aa21.76■■□□□ 1.07
NEO1-201ENST00000261908 CDK11BP21127 795 aaKnown RBP21.74■■□□□ 1.07
NEO1-201ENST00000261908 TULP1O00294 542 aaPredicted RBP21.71■■□□□ 1.07
NEO1-201ENST00000261908 ESF1Q9H501 851 aaKnown RBP21.69■■□□□ 1.06
NEO1-201ENST00000261908 ZBTB7CA1YPR0 619 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms