RNA–Protein interactions for RNA: ENST00000258457.6

C2orf49-201, Transcript of chromosome 2 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf49, Length 4,768 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf49-201ENST00000258457 DCAF8L2P0C7V8 631 aa16.98■□□□□ 0.31
C2orf49-201ENST00000258457 SUPT5HO00267 1087 aaKnown RBP16.13■□□□□ 0.17
C2orf49-201ENST00000258457 EHMT2Q96KQ7 1210 aa15.88■□□□□ 0.13
C2orf49-201ENST00000258457 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
C2orf49-201ENST00000258457 FAM9AQ8IZU1 332 aaPredicted RBP15.31■□□□□ 0.04
C2orf49-201ENST00000258457 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
C2orf49-201ENST00000258457 NISCHQ9Y2I1 1504 aa15.23■□□□□ 0.03
C2orf49-201ENST00000258457 PCGF6Q9BYE7 350 aa15.14■□□□□ 0.01
C2orf49-201ENST00000258457 APLP2Q06481 763 aa15.11■□□□□ 0.01
C2orf49-201ENST00000258457 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
C2orf49-201ENST00000258457 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
C2orf49-201ENST00000258457 ATP1B4Q9UN42 357 aaPredicted RBP14.8□□□□□ -0.04
C2orf49-201ENST00000258457 CCER1Q8TC90 406 aaPredicted RBP14.76□□□□□ -0.05
C2orf49-201ENST00000258457 TRIM41Q8WV44 630 aa14.74□□□□□ -0.05
C2orf49-201ENST00000258457 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
C2orf49-201ENST00000258457 UBTFP17480 764 aaKnown RBP14.65□□□□□ -0.06
C2orf49-201ENST00000258457 YTHDC1Q96MU7 727 aaKnown RBP14.63□□□□□ -0.07
C2orf49-201ENST00000258457 CENPBP07199 599 aaPredicted RBP14.61□□□□□ -0.07
C2orf49-201ENST00000258457 ERICH6Q7L0X2 663 aa14.54□□□□□ -0.08
C2orf49-201ENST00000258457 ZEB1P37275 1124 aaPredicted RBP14.47□□□□□ -0.09
C2orf49-201ENST00000258457 MYT1Q01538 1121 aa14.41□□□□□ -0.1
C2orf49-201ENST00000258457 ITGAEP38570 1179 aa14.37□□□□□ -0.11
C2orf49-201ENST00000258457 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
C2orf49-201ENST00000258457 NEFLP07196 543 aa14.34□□□□□ -0.11
C2orf49-201ENST00000258457 CNGB1Q14028 1251 aaPredicted RBP14.32□□□□□ -0.12
C2orf49-201ENST00000258457 POLR3GLQ9BT43 218 aa14.26□□□□□ -0.13
C2orf49-201ENST00000258457 HNRNPUL2Q1KMD3 747 aaKnown RBP14.21□□□□□ -0.13
C2orf49-201ENST00000258457 HRCP23327 699 aa14.21□□□□□ -0.13
C2orf49-201ENST00000258457 TRIM26Q12899 539 aaPredicted RBP14.21□□□□□ -0.14
C2orf49-201ENST00000258457 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
C2orf49-201ENST00000258457 MYT1LQ9UL68 1186 aa14.14□□□□□ -0.15
C2orf49-201ENST00000258457 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
C2orf49-201ENST00000258457 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
C2orf49-201ENST00000258457 SLC4A1APQ9BWU0 796 aaKnown RBP13.92□□□□□ -0.18
C2orf49-201ENST00000258457 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
C2orf49-201ENST00000258457 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
C2orf49-201ENST00000258457 NEUROD1Q13562 356 aa13.8□□□□□ -0.2
C2orf49-201ENST00000258457 BCANQ96GW7 911 aa13.79□□□□□ -0.2
C2orf49-201ENST00000258457 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
C2orf49-201ENST00000258457 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
C2orf49-201ENST00000258457 TRIM52Q96A61 297 aa13.74□□□□□ -0.21
C2orf49-201ENST00000258457 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
C2orf49-201ENST00000258457 GTF3C3Q9Y5Q9 886 aa13.67□□□□□ -0.22
C2orf49-201ENST00000258457 BCL11AQ9H165 835 aa13.66□□□□□ -0.22
C2orf49-201ENST00000258457 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
C2orf49-201ENST00000258457 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
C2orf49-201ENST00000258457 RTL5Q5HYW3 569 aaPredicted RBP13.61□□□□□ -0.23
C2orf49-201ENST00000258457 FBLN2P98095 1184 aa13.6□□□□□ -0.23
C2orf49-201ENST00000258457 P3H3Q8IVL6 736 aa13.58□□□□□ -0.24
C2orf49-201ENST00000258457 ANP32CO43423 234 aa13.5□□□□□ -0.25
C2orf49-201ENST00000258457 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
C2orf49-201ENST00000258457 ABCC9O60706 1549 aa13.45□□□□□ -0.26
C2orf49-201ENST00000258457 CDK11AQ9UQ88 783 aaPredicted RBP13.41□□□□□ -0.26
C2orf49-201ENST00000258457 ZNF777Q9ULD5 760 aaPredicted RBP13.4□□□□□ -0.26
C2orf49-201ENST00000258457 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
C2orf49-201ENST00000258457 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
C2orf49-201ENST00000258457 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
C2orf49-201ENST00000258457 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
C2orf49-201ENST00000258457 NPM2Q86SE8 214 aaKnown RBP13.32□□□□□ -0.28
C2orf49-201ENST00000258457 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
C2orf49-201ENST00000258457 DDX10Q13206 875 aaKnown RBP13.27□□□□□ -0.29
C2orf49-201ENST00000258457 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
C2orf49-201ENST00000258457 FKBP8Q14318 412 aa13.25□□□□□ -0.29
C2orf49-201ENST00000258457 FAM9BQ8IZU0 186 aa13.23□□□□□ -0.29
C2orf49-201ENST00000258457 CHGAP10645 457 aaKnown RBP13.23□□□□□ -0.29
C2orf49-201ENST00000258457 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
C2orf49-201ENST00000258457 HIRIP3Q9BW71 556 aaPredicted RBP13.21□□□□□ -0.3
C2orf49-201ENST00000258457 NEFMP07197 916 aa13.2□□□□□ -0.3
C2orf49-201ENST00000258457 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
C2orf49-201ENST00000258457 ANP32AP39687 249 aaKnown RBP13.17□□□□□ -0.3
C2orf49-201ENST00000258457 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
C2orf49-201ENST00000258457 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
C2orf49-201ENST00000258457 EIF5BO60841 1220 aaKnown RBP13.12□□□□□ -0.31
C2orf49-201ENST00000258457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■■□□□ 12.2
C2orf49-201ENST00000258457 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
C2orf49-201ENST00000258457 TONSLQ96HA7 1378 aa13.1□□□□□ -0.31
C2orf49-201ENST00000258457 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
C2orf49-201ENST00000258457 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
C2orf49-201ENST00000258457 ARXQ96QS3 562 aa13.07□□□□□ -0.32
C2orf49-201ENST00000258457 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
C2orf49-201ENST00000258457 ESF1Q9H501 851 aaKnown RBP13.06□□□□□ -0.32
C2orf49-201ENST00000258457 TMC1Q8TDI8 760 aa13.05□□□□□ -0.32
C2orf49-201ENST00000258457 NBR1Q14596 966 aa13.05□□□□□ -0.32
C2orf49-201ENST00000258457 MIER1Q8N108 512 aa13.05□□□□□ -0.32
C2orf49-201ENST00000258457 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
C2orf49-201ENST00000258457 CCDC136Q96JN2 1154 aa13.03□□□□□ -0.32
C2orf49-201ENST00000258457 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
C2orf49-201ENST00000258457 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.34
C2orf49-201ENST00000258457 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
C2orf49-201ENST00000258457 UPF2Q9HAU5 1272 aaKnown RBP12.93□□□□□ -0.34
C2orf49-201ENST00000258457 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
C2orf49-201ENST00000258457 TSPY4P0CV99 314 aa12.93□□□□□ -0.34
C2orf49-201ENST00000258457 TSPY10P0CW01 314 aa12.93□□□□□ -0.34
C2orf49-201ENST00000258457 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
C2orf49-201ENST00000258457 WDR43Q15061 677 aaKnown RBP eCLIP12.9□□□□□ -0.34
C2orf49-201ENST00000258457 ANP32BQ92688 251 aaKnown RBP12.9□□□□□ -0.34
C2orf49-201ENST00000258457 A0A0G2JS52 829 aa12.89□□□□□ -0.35
C2orf49-201ENST00000258457 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
C2orf49-201ENST00000258457 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
C2orf49-201ENST00000258457 KCNH8Q96L42 1107 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms