RNA–Protein interactions for RNA: ENST00000254190.3

CHSY1-201, Transcript of chondroitin sulfate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHSY1, Length 4,550 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHSY1-201ENST00000254190 SF3B1O75533 1304 aaKnown RBP eCLIP23.98■■□□□ 1.434e-6■■■■■ 103.8
CHSY1-201ENST00000254190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.41■■□□□ 1.52e-7■■■■■ 102.3
CHSY1-201ENST00000254190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.42■■□□□ 1.982e-6■■■■■ 84
CHSY1-201ENST00000254190 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.58■■□□□ 1.692e-6■■■■■ 54.4
CHSY1-201ENST00000254190 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.17■■□□□ 1.624e-6■■■■■ 48.1
CHSY1-201ENST00000254190 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.93■■□□□ 1.14e-6■■■■■ 41.3
CHSY1-201ENST00000254190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.51■■■□□ 2.324e-7■■■■■ 39.7
CHSY1-201ENST00000254190 DDX6P26196 483 aaKnown RBP eCLIP23.18■■□□□ 1.38e-7■■■■■ 36.2
CHSY1-201ENST00000254190 RBFOX2O43251 390 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■■■ 34.2
CHSY1-201ENST00000254190 HNRNPMP52272 730 aaKnown RBP eCLIP30.8■■■□□ 2.523e-10■■■■■ 34.1
CHSY1-201ENST00000254190 GTF2F1P35269 517 aaKnown RBP eCLIP27.69■■■□□ 2.022e-9■■■■■ 34.1
CHSY1-201ENST00000254190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.936e-9■■■■■ 33.5
CHSY1-201ENST00000254190 DDX3XO00571 662 aaKnown RBP eCLIP25.2■■□□□ 1.624e-10■■■■■ 32.9
CHSY1-201ENST00000254190 RBM15Q96T37 977 aaKnown RBP eCLIP25.51■■□□□ 1.677e-9■■■■■ 29.3
CHSY1-201ENST00000254190 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP24.3■■□□□ 1.486e-8■■■■■ 26.9
CHSY1-201ENST00000254190 PTBP1P26599 531 aaKnown RBP eCLIP22.08■■□□□ 1.136e-9■■■■□ 25.1
CHSY1-201ENST00000254190 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.89■■□□□ 1.424e-6■■■■□ 23.6
CHSY1-201ENST00000254190 MATR3P43243 847 aaKnown RBP eCLIP27.53■■■□□ 25e-6■■■■□ 22.8
CHSY1-201ENST00000254190 TAF15Q92804 592 aaKnown RBP eCLIP20.67■□□□□ 0.91e-5■■■□□ 19
CHSY1-201ENST00000254190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.15■■■□□ 2.423e-6■■■□□ 18.2
CHSY1-201ENST00000254190 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.92■■□□□ 1.262e-7■■■□□ 17.7
CHSY1-201ENST00000254190 EIF3HO15372 352 aaKnown RBP eCLIP25.69■■□□□ 1.77e-7■■■□□ 16.9
CHSY1-201ENST00000254190 FUBP3Q96I24 572 aaKnown RBP eCLIP23.65■■□□□ 1.381e-6■■□□□ 14
CHSY1-201ENST00000254190 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.85■■□□□ 1.734e-9■■□□□ 13.8
CHSY1-201ENST00000254190 PPIGQ13427 754 aaKnown RBP eCLIP23.15■■□□□ 1.34e-6■■□□□ 13.5
CHSY1-201ENST00000254190 SFPQP23246 707 aaKnown RBP eCLIP28.16■■■□□ 2.14e-6■□□□□ 11
CHSY1-201ENST00000254190 RPS3P23396 243 aaKnown RBP eCLIP23■■□□□ 1.272e-6■□□□□ 10.8
CHSY1-201ENST00000254190 HNRNPLP14866 589 aaKnown RBP eCLIP24.39■■□□□ 1.495e-6■□□□□ 10.4
CHSY1-201ENST00000254190 HNRNPKP61978 463 aaKnown RBP eCLIP22.36■■□□□ 1.172e-7■□□□□ 10.2
CHSY1-201ENST00000254190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.03■■□□□ 1.62e-7■□□□□ 8.8
Retrieved 30 of 30 RNA–protein pairs in 3.2 ms