RNA–Protein interactions for RNA: ENST00000246548.8

UBA2-201, Transcript of ubiquitin like modifier activating enzyme 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA2, Length 4,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA2-201ENST00000246548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.067e-7■■■■■ 60.7
UBA2-201ENST00000246548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.8□□□□□ -0.25e-15■■■■■ 48
UBA2-201ENST00000246548 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.41□□□□□ -0.266e-10■■■■■ 42.9
UBA2-201ENST00000246548 PUS1Q9Y606 427 aaKnown RBP eCLIP10.93□□□□□ -0.663e-8■■■■■ 37.8
UBA2-201ENST00000246548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■■■ 37.1
UBA2-201ENST00000246548 NCBP2P52298 156 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■■■■■ 37
UBA2-201ENST00000246548 RPS3P23396 243 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■■■■ 35.9
UBA2-201ENST00000246548 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.042e-7■■■■■ 32.7
UBA2-201ENST00000246548 AKAP1Q92667 903 aaKnown RBP eCLIP12.03□□□□□ -0.481e-7■■■■■ 30.6
UBA2-201ENST00000246548 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -06e-40■■■■■ 30.5
UBA2-201ENST00000246548 HNRNPMP52272 730 aaKnown RBP eCLIP19.94■□□□□ 0.789e-7■■■■■ 28.9
UBA2-201ENST00000246548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.59□□□□□ -0.393e-9■■■■■ 28.8
UBA2-201ENST00000246548 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.57□□□□□ -0.728e-20■■■■□ 26.4
UBA2-201ENST00000246548 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.048e-7■■■■□ 24.8
UBA2-201ENST00000246548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■■■■□ 22.4
UBA2-201ENST00000246548 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.14□□□□□ -0.156e-7■■■■□ 21.6
UBA2-201ENST00000246548 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.045e-9■■■■□ 20.3
UBA2-201ENST00000246548 SF3B4Q15427 424 aaKnown RBP eCLIP12.02□□□□□ -0.498e-7■■■■□ 19.6
UBA2-201ENST00000246548 YBX3P16989 372 aaKnown RBP eCLIP15.19■□□□□ 0.021e-7■■■■□ 19.3
UBA2-201ENST00000246548 FXR1P51114 621 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■□□ 19.2
UBA2-201ENST00000246548 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.118e-7■■■□□ 18.6
UBA2-201ENST00000246548 PPIGQ13427 754 aaKnown RBP eCLIP13.67□□□□□ -0.226e-6■■■□□ 18.4
UBA2-201ENST00000246548 EFTUD2Q15029 972 aaKnown RBP eCLIP14.26□□□□□ -0.132e-8■■■□□ 18.4
UBA2-201ENST00000246548 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.469e-6■■■□□ 17.3
UBA2-201ENST00000246548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.16■□□□□ 0.983e-9■■■□□ 16.9
UBA2-201ENST00000246548 SUB1P53999 127 aaKnown RBP eCLIP10.84□□□□□ -0.678e-8■■■□□ 16.6
UBA2-201ENST00000246548 KHSRPQ92945 711 aaKnown RBP eCLIP14.63□□□□□ -0.077e-8■■■□□ 16.3
UBA2-201ENST00000246548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.06□□□□□ -0.483e-8■■□□□ 14.2
UBA2-201ENST00000246548 U2AF1Q01081 240 aaKnown RBP eCLIP18.03■□□□□ 0.482e-8■■□□□ 13.9
UBA2-201ENST00000246548 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■□□□ 13.8
UBA2-201ENST00000246548 PTBP1P26599 531 aaKnown RBP eCLIP12.44□□□□□ -0.425e-6■■□□□ 13.8
UBA2-201ENST00000246548 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.19e-8■■□□□ 13.7
UBA2-201ENST00000246548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.44■□□□□ 0.386e-7■■□□□ 13.5
UBA2-201ENST00000246548 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.03□□□□□ -0.167e-7■■□□□ 13.2
UBA2-201ENST00000246548 GPKOWQ92917 476 aaPredicted RBP eCLIP15.76■□□□□ 0.111e-6■■□□□ 13.1
UBA2-201ENST00000246548 SMNDC1O75940 238 aaKnown RBP eCLIP13.44□□□□□ -0.265e-11■■□□□ 12.7
UBA2-201ENST00000246548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.685e-8■■□□□ 12.6
UBA2-201ENST00000246548 PABPC4Q13310 644 aaKnown RBP eCLIP15.24■□□□□ 0.032e-8■■□□□ 12
UBA2-201ENST00000246548 FUBP3Q96I24 572 aaKnown RBP eCLIP14.19□□□□□ -0.143e-7■■□□□ 11.7
UBA2-201ENST00000246548 G3BP1Q13283 466 aaKnown RBP eCLIP16.75■□□□□ 0.278e-6■■□□□ 11.5
UBA2-201ENST00000246548 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.183e-7■■□□□ 11.5
UBA2-201ENST00000246548 NKRFO15226 690 aaKnown RBP eCLIP15.51■□□□□ 0.076e-9■□□□□ 11.2
UBA2-201ENST00000246548 PRPF4O43172 522 aaKnown RBP eCLIP14.31□□□□□ -0.123e-9■□□□□ 10.9
UBA2-201ENST00000246548 TIA1P31483 386 aaKnown RBP eCLIP13.24□□□□□ -0.299e-12■□□□□ 10.5
UBA2-201ENST00000246548 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■□□□□ 10
UBA2-201ENST00000246548 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.114e-8■□□□□ 9.7
UBA2-201ENST00000246548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.33■□□□□ 0.046e-7■□□□□ 9.6
UBA2-201ENST00000246548 TRA2AQ13595 282 aaKnown RBP eCLIP12.47□□□□□ -0.414e-9■□□□□ 9.6
UBA2-201ENST00000246548 PUM1Q14671 1186 aaKnown RBP eCLIP13.07□□□□□ -0.324e-8■□□□□ 9.5
UBA2-201ENST00000246548 PCBP1Q15365 356 aaKnown RBP eCLIP14.67□□□□□ -0.062e-11■□□□□ 9.3
UBA2-201ENST00000246548 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.167e-7■□□□□ 9.1
UBA2-201ENST00000246548 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.244e-7■□□□□ 9.1
UBA2-201ENST00000246548 ZNF622Q969S3 477 aaKnown RBP eCLIP15.69■□□□□ 0.13e-8■□□□□ 8.9
UBA2-201ENST00000246548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.46■□□□□ 0.879e-22■□□□□ 8.9
UBA2-201ENST00000246548 SF3A3Q12874 501 aaKnown RBP eCLIP13.9□□□□□ -0.185e-6■□□□□ 8
Retrieved 55 of 55 RNA–protein pairs in 5 ms