RNA–Protein interactions for RNA: ENST00000229201.4

TIMELESS-201, Transcript of timeless circadian regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TIMELESS, Length 4,376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-201ENST00000229201 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
TIMELESS-201ENST00000229201 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
TIMELESS-201ENST00000229201 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
TIMELESS-201ENST00000229201 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
TIMELESS-201ENST00000229201 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
TIMELESS-201ENST00000229201 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
TIMELESS-201ENST00000229201 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
TIMELESS-201ENST00000229201 MYO15BQ96JP2 1530 aa16.86■□□□□ 0.29
TIMELESS-201ENST00000229201 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
TIMELESS-201ENST00000229201 ABCC9O60706 1549 aa16.79■□□□□ 0.28
TIMELESS-201ENST00000229201 SCRIBQ14160 1630 aa16.75■□□□□ 0.27
TIMELESS-201ENST00000229201 NACADO15069 1562 aa16.69■□□□□ 0.26
TIMELESS-201ENST00000229201 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
TIMELESS-201ENST00000229201 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.23
TIMELESS-201ENST00000229201 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
TIMELESS-201ENST00000229201 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
TIMELESS-201ENST00000229201 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
TIMELESS-201ENST00000229201 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
TIMELESS-201ENST00000229201 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
TIMELESS-201ENST00000229201 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
TIMELESS-201ENST00000229201 FAM9AQ8IZU1 332 aaPredicted RBP16.15■□□□□ 0.18
TIMELESS-201ENST00000229201 WIZO95785 1651 aa16.14■□□□□ 0.17
TIMELESS-201ENST00000229201 HRCP23327 699 aa16.06■□□□□ 0.16
TIMELESS-201ENST00000229201 PABPN1Q86U42 306 aaKnown RBP eCLIP16.06■□□□□ 0.166e-6■■□□□ 12.8
TIMELESS-201ENST00000229201 SMARCA4P51532 1647 aa16■□□□□ 0.15
TIMELESS-201ENST00000229201 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
TIMELESS-201ENST00000229201 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
TIMELESS-201ENST00000229201 TOP2AP11388 1531 aaKnown RBP15.97■□□□□ 0.15
TIMELESS-201ENST00000229201 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
TIMELESS-201ENST00000229201 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
TIMELESS-201ENST00000229201 BICRAQ9NZM4 1560 aa15.85■□□□□ 0.13
TIMELESS-201ENST00000229201 SMARCA2P51531 1590 aa15.83■□□□□ 0.12
TIMELESS-201ENST00000229201 EIF4G1Q04637 1599 aaKnown RBP15.77■□□□□ 0.11
TIMELESS-201ENST00000229201 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
TIMELESS-201ENST00000229201 PEG3Q9GZU2 1588 aa15.7■□□□□ 0.1
TIMELESS-201ENST00000229201 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
TIMELESS-201ENST00000229201 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
TIMELESS-201ENST00000229201 ZEB1P37275 1124 aaPredicted RBP15.68■□□□□ 0.1
TIMELESS-201ENST00000229201 EEA1Q15075 1411 aa15.67■□□□□ 0.1
TIMELESS-201ENST00000229201 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
TIMELESS-201ENST00000229201 UBTFP17480 764 aaKnown RBP15.64■□□□□ 0.09
TIMELESS-201ENST00000229201 PPARGC1BQ86YN6 1023 aaKnown RBP15.64■□□□□ 0.09
TIMELESS-201ENST00000229201 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.09
TIMELESS-201ENST00000229201 SOGA1O94964 1423 aa15.61■□□□□ 0.09
TIMELESS-201ENST00000229201 TNIKQ9UKE5 1360 aa15.55■□□□□ 0.08
TIMELESS-201ENST00000229201 CEP162Q5TB80 1403 aa15.52■□□□□ 0.08
TIMELESS-201ENST00000229201 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
TIMELESS-201ENST00000229201 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
TIMELESS-201ENST00000229201 NCAPD3P42695 1498 aa15.44■□□□□ 0.06
TIMELESS-201ENST00000229201 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
TIMELESS-201ENST00000229201 CEP164Q9UPV0 1460 aa15.43■□□□□ 0.06
TIMELESS-201ENST00000229201 SYNJ1O43426 1573 aa15.42■□□□□ 0.06
TIMELESS-201ENST00000229201 HMGXB3Q12766 1538 aa15.39■□□□□ 0.05
TIMELESS-201ENST00000229201 CCER1Q8TC90 406 aaPredicted RBP15.39■□□□□ 0.05
TIMELESS-201ENST00000229201 APLP2Q06481 763 aa15.38■□□□□ 0.05
TIMELESS-201ENST00000229201 CLIP1P30622 1438 aa15.32■□□□□ 0.04
TIMELESS-201ENST00000229201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
TIMELESS-201ENST00000229201 KIF21BO75037 1637 aa15.31■□□□□ 0.04
TIMELESS-201ENST00000229201 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
TIMELESS-201ENST00000229201 TOP2BQ02880 1626 aa15.3■□□□□ 0.04
TIMELESS-201ENST00000229201 CFTRP13569 1480 aa15.25■□□□□ 0.03
TIMELESS-201ENST00000229201 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
TIMELESS-201ENST00000229201 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
TIMELESS-201ENST00000229201 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.02
TIMELESS-201ENST00000229201 VPS8Q8N3P4 1428 aa15.2■□□□□ 0.02
TIMELESS-201ENST00000229201 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
TIMELESS-201ENST00000229201 CUX1P39880 1505 aa15.17■□□□□ 0.02
TIMELESS-201ENST00000229201 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
TIMELESS-201ENST00000229201 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
TIMELESS-201ENST00000229201 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
TIMELESS-201ENST00000229201 CUX2O14529 1486 aa15.06■□□□□ 0
TIMELESS-201ENST00000229201 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
TIMELESS-201ENST00000229201 IGF1RP08069 1367 aa15□□□□□ -0.01
TIMELESS-201ENST00000229201 FANCD2Q9BXW9 1451 aa14.99□□□□□ -0.01
TIMELESS-201ENST00000229201 CARMIL1Q5VZK9 1371 aa14.99□□□□□ -0.01
TIMELESS-201ENST00000229201 FGD5Q6ZNL6 1462 aa14.98□□□□□ -0.01
TIMELESS-201ENST00000229201 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
TIMELESS-201ENST00000229201 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
TIMELESS-201ENST00000229201 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
TIMELESS-201ENST00000229201 KANK4Q5T7N3 995 aaPredicted RBP14.91□□□□□ -0.02
TIMELESS-201ENST00000229201 ARHGAP35Q9NRY4 1499 aa14.89□□□□□ -0.03
TIMELESS-201ENST00000229201 ZNF316A6NFI3 1004 aaPredicted RBP14.88□□□□□ -0.03
TIMELESS-201ENST00000229201 ATP1B4Q9UN42 357 aaPredicted RBP14.87□□□□□ -0.03
TIMELESS-201ENST00000229201 DNMBPQ6XZF7 1577 aa14.86□□□□□ -0.03
TIMELESS-201ENST00000229201 NESP48681 1621 aa14.84□□□□□ -0.03
TIMELESS-201ENST00000229201 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
TIMELESS-201ENST00000229201 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.04
TIMELESS-201ENST00000229201 FHAD1B1AJZ9 1412 aa14.83□□□□□ -0.04
TIMELESS-201ENST00000229201 P3H3Q8IVL6 736 aa14.82□□□□□ -0.04
TIMELESS-201ENST00000229201 PDS5BQ9NTI5 1447 aa14.82□□□□□ -0.04
TIMELESS-201ENST00000229201 POLA1P09884 1462 aaPredicted RBP14.82□□□□□ -0.04
TIMELESS-201ENST00000229201 ITGAEP38570 1179 aa14.82□□□□□ -0.04
TIMELESS-201ENST00000229201 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
TIMELESS-201ENST00000229201 ABCA10Q8WWZ4 1543 aa14.81□□□□□ -0.04
TIMELESS-201ENST00000229201 CCNB3Q8WWL7 1395 aa14.81□□□□□ -0.04
TIMELESS-201ENST00000229201 LAMC3Q9Y6N6 1575 aa14.79□□□□□ -0.04
TIMELESS-201ENST00000229201 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
TIMELESS-201ENST00000229201 CENPBP07199 599 aaPredicted RBP14.77□□□□□ -0.05
TIMELESS-201ENST00000229201 MAP3K1Q13233 1512 aa14.74□□□□□ -0.05
TIMELESS-201ENST00000229201 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms