RNA–Protein interactions for RNA: ENST00000222584.7

SP4-201, Transcript of Sp4 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP4, Length 6,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-201ENST00000222584 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
SP4-201ENST00000222584 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
SP4-201ENST00000222584 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
SP4-201ENST00000222584 SUPT5HO00267 1087 aaKnown RBP15.22■□□□□ 0.03
SP4-201ENST00000222584 NISCHQ9Y2I1 1504 aa15.03■□□□□ -0
SP4-201ENST00000222584 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
SP4-201ENST00000222584 TTBK1Q5TCY1 1321 aaPredicted RBP14.59□□□□□ -0.07
SP4-201ENST00000222584 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
SP4-201ENST00000222584 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.12
SP4-201ENST00000222584 APLP2Q06481 763 aa14.03□□□□□ -0.16
SP4-201ENST00000222584 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.18
SP4-201ENST00000222584 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
SP4-201ENST00000222584 CHIC1Q5VXU3 224 aa13.89□□□□□ -0.19
SP4-201ENST00000222584 ABCC9O60706 1549 aa13.87□□□□□ -0.19
SP4-201ENST00000222584 TRIM41Q8WV44 630 aa13.83□□□□□ -0.2
SP4-201ENST00000222584 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
SP4-201ENST00000222584 MYT1LQ9UL68 1186 aa13.81□□□□□ -0.2
SP4-201ENST00000222584 PCGF6Q9BYE7 350 aa13.76□□□□□ -0.21
SP4-201ENST00000222584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.75□□□□□ -0.21
SP4-201ENST00000222584 HNRNPUL2Q1KMD3 747 aaKnown RBP13.75□□□□□ -0.21
SP4-201ENST00000222584 ITGAEP38570 1179 aa13.63□□□□□ -0.23
SP4-201ENST00000222584 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
SP4-201ENST00000222584 FBLN2P98095 1184 aa13.54□□□□□ -0.24
SP4-201ENST00000222584 POLR3GLQ9BT43 218 aa13.44□□□□□ -0.26
SP4-201ENST00000222584 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
SP4-201ENST00000222584 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
SP4-201ENST00000222584 PLPPR3Q6T4P5 718 aa13.41□□□□□ -0.26
SP4-201ENST00000222584 CCER1Q8TC90 406 aaPredicted RBP13.41□□□□□ -0.26
SP4-201ENST00000222584 LOC105371045A0A1W2PR82 267 aa13.39□□□□□ -0.27
SP4-201ENST00000222584 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
SP4-201ENST00000222584 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
SP4-201ENST00000222584 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
SP4-201ENST00000222584 P3H3Q8IVL6 736 aa13.21□□□□□ -0.3
SP4-201ENST00000222584 MYT1Q01538 1121 aa13.14□□□□□ -0.31
SP4-201ENST00000222584 FAM50AQ14320 339 aaKnown RBP13.1□□□□□ -0.31
SP4-201ENST00000222584 SENP3Q9H4L4 574 aaPredicted RBP13.09□□□□□ -0.31
SP4-201ENST00000222584 BCANQ96GW7 911 aa13.04□□□□□ -0.32
SP4-201ENST00000222584 ZNF326Q5BKZ1 582 aaKnown RBP13□□□□□ -0.33
SP4-201ENST00000222584 TRIM52Q96A61 297 aa13□□□□□ -0.33
SP4-201ENST00000222584 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
SP4-201ENST00000222584 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
SP4-201ENST00000222584 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
SP4-201ENST00000222584 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
SP4-201ENST00000222584 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
SP4-201ENST00000222584 BCL11AQ9H165 835 aa12.9□□□□□ -0.35
SP4-201ENST00000222584 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
SP4-201ENST00000222584 NEFLP07196 543 aa12.8□□□□□ -0.36
SP4-201ENST00000222584 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
SP4-201ENST00000222584 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
SP4-201ENST00000222584 ESF1Q9H501 851 aaKnown RBP12.72□□□□□ -0.37
SP4-201ENST00000222584 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
SP4-201ENST00000222584 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
SP4-201ENST00000222584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.69□□□□□ -0.38
SP4-201ENST00000222584 SCAF1Q9H7N4 1312 aaKnown RBP12.68□□□□□ -0.38
SP4-201ENST00000222584 STAG3Q9UJ98 1225 aa12.67□□□□□ -0.38
SP4-201ENST00000222584 TRHP20396 242 aaPredicted RBP12.66□□□□□ -0.38
SP4-201ENST00000222584 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
SP4-201ENST00000222584 CHMP7Q8WUX9 453 aaPredicted RBP12.65□□□□□ -0.39
SP4-201ENST00000222584 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
SP4-201ENST00000222584 A0A0G2JS52 829 aa12.63□□□□□ -0.39
SP4-201ENST00000222584 HRCP23327 699 aa12.59□□□□□ -0.39
SP4-201ENST00000222584 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
SP4-201ENST00000222584 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
SP4-201ENST00000222584 ARID4BQ4LE39 1312 aaPredicted RBP12.55□□□□□ -0.4
SP4-201ENST00000222584 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
SP4-201ENST00000222584 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
SP4-201ENST00000222584 KDM2AQ9Y2K7 1162 aa12.46□□□□□ -0.42
SP4-201ENST00000222584 MLECQ14165 292 aa12.44□□□□□ -0.42
SP4-201ENST00000222584 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
SP4-201ENST00000222584 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
SP4-201ENST00000222584 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
SP4-201ENST00000222584 SALL2Q9Y467 1007 aaPredicted RBP12.42□□□□□ -0.42
SP4-201ENST00000222584 CDK11AQ9UQ88 783 aaPredicted RBP12.4□□□□□ -0.43
SP4-201ENST00000222584 HIRIP3Q9BW71 556 aaPredicted RBP12.39□□□□□ -0.43
SP4-201ENST00000222584 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
SP4-201ENST00000222584 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
SP4-201ENST00000222584 ZNF316A6NFI3 1004 aaPredicted RBP12.35□□□□□ -0.43
SP4-201ENST00000222584 RRP7BPQ9NSQ0 103 aa12.34□□□□□ -0.43
SP4-201ENST00000222584 RGL3Q3MIN7 710 aa12.31□□□□□ -0.44
SP4-201ENST00000222584 ZCCHC6Q5VYS8 1495 aaKnown RBP12.3□□□□□ -0.44
SP4-201ENST00000222584 PPP1R15AO75807 674 aaPredicted RBP12.29□□□□□ -0.44
SP4-201ENST00000222584 LMOD2Q6P5Q4 547 aa12.29□□□□□ -0.44
SP4-201ENST00000222584 CANXP27824 592 aaKnown RBP12.28□□□□□ -0.44
SP4-201ENST00000222584 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
SP4-201ENST00000222584 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
SP4-201ENST00000222584 BAZ1BQ9UIG0 1483 aaKnown RBP12.24□□□□□ -0.45
SP4-201ENST00000222584 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
SP4-201ENST00000222584 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
SP4-201ENST00000222584 CECR2Q9BXF3 1484 aa12.23□□□□□ -0.45
SP4-201ENST00000222584 NEFMP07197 916 aa12.22□□□□□ -0.45
SP4-201ENST00000222584 ARXQ96QS3 562 aa12.22□□□□□ -0.45
SP4-201ENST00000222584 ANP32CO43423 234 aa12.22□□□□□ -0.45
SP4-201ENST00000222584 MTUS2Q5JR59 1369 aa12.2□□□□□ -0.46
SP4-201ENST00000222584 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
SP4-201ENST00000222584 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
SP4-201ENST00000222584 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
SP4-201ENST00000222584 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
SP4-201ENST00000222584 SOX12O15370 315 aa12.18□□□□□ -0.46
SP4-201ENST00000222584 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
SP4-201ENST00000222584 TMC1Q8TDI8 760 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms