RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
TRO-201ENST00000173898 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
TRO-201ENST00000173898 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
TRO-201ENST00000173898 SHROOM4Q9ULL8 1493 aa19.68■□□□□ 0.74
TRO-201ENST00000173898 EHMT2Q96KQ7 1210 aa19.34■□□□□ 0.69
TRO-201ENST00000173898 FAM9AQ8IZU1 332 aaPredicted RBP18.91■□□□□ 0.62
TRO-201ENST00000173898 PCGF6Q9BYE7 350 aa18.83■□□□□ 0.61
TRO-201ENST00000173898 APLP2Q06481 763 aa18.83■□□□□ 0.61
TRO-201ENST00000173898 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
TRO-201ENST00000173898 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
TRO-201ENST00000173898 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
TRO-201ENST00000173898 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
TRO-201ENST00000173898 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
TRO-201ENST00000173898 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
TRO-201ENST00000173898 CENPBP07199 599 aaPredicted RBP18.29■□□□□ 0.52
TRO-201ENST00000173898 UBTFP17480 764 aaKnown RBP18.27■□□□□ 0.51
TRO-201ENST00000173898 ATP1B4Q9UN42 357 aaPredicted RBP18.19■□□□□ 0.5
TRO-201ENST00000173898 PPARGC1BQ86YN6 1023 aaKnown RBP18.11■□□□□ 0.49
TRO-201ENST00000173898 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
TRO-201ENST00000173898 YTHDC1Q96MU7 727 aaKnown RBP17.97■□□□□ 0.47
TRO-201ENST00000173898 LOC105371045A0A1W2PR82 267 aa17.94■□□□□ 0.46
TRO-201ENST00000173898 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
TRO-201ENST00000173898 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
TRO-201ENST00000173898 HRCP23327 699 aa17.9■□□□□ 0.46
TRO-201ENST00000173898 NEFLP07196 543 aa17.82■□□□□ 0.44
TRO-201ENST00000173898 ITGAEP38570 1179 aa17.71■□□□□ 0.43
TRO-201ENST00000173898 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
TRO-201ENST00000173898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
TRO-201ENST00000173898 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
TRO-201ENST00000173898 MYT1Q01538 1121 aa17.44■□□□□ 0.38
TRO-201ENST00000173898 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
TRO-201ENST00000173898 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
TRO-201ENST00000173898 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
TRO-201ENST00000173898 PABPN1Q86U42 306 aaKnown RBP eCLIP17.27■□□□□ 0.354e-7■■□□□ 14.5
TRO-201ENST00000173898 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
TRO-201ENST00000173898 ABCC9O60706 1549 aa17.22■□□□□ 0.35
TRO-201ENST00000173898 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
TRO-201ENST00000173898 NEUROD1Q13562 356 aa17.11■□□□□ 0.33
TRO-201ENST00000173898 TRIM52Q96A61 297 aa17.09■□□□□ 0.33
TRO-201ENST00000173898 GTF3C3Q9Y5Q9 886 aa17.04■□□□□ 0.32
TRO-201ENST00000173898 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.31
TRO-201ENST00000173898 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
TRO-201ENST00000173898 ZNF316A6NFI3 1004 aaPredicted RBP16.97■□□□□ 0.31
TRO-201ENST00000173898 BCANQ96GW7 911 aa16.95■□□□□ 0.3
TRO-201ENST00000173898 ANP32CO43423 234 aa16.92■□□□□ 0.3
TRO-201ENST00000173898 CLSPNQ9HAW4 1339 aa16.91■□□□□ 0.3
TRO-201ENST00000173898 ZNF326Q5BKZ1 582 aaKnown RBP16.91■□□□□ 0.3
TRO-201ENST00000173898 RTL5Q5HYW3 569 aaPredicted RBP16.87■□□□□ 0.29
TRO-201ENST00000173898 P3H3Q8IVL6 736 aa16.87■□□□□ 0.29
TRO-201ENST00000173898 FBLN2P98095 1184 aa16.82■□□□□ 0.28
TRO-201ENST00000173898 ACIN1Q9UKV3 1341 aaKnown RBP16.81■□□□□ 0.28
TRO-201ENST00000173898 ARID3CA6NKF2 412 aa16.77■□□□□ 0.28
TRO-201ENST00000173898 CDK11AQ9UQ88 783 aaPredicted RBP16.74■□□□□ 0.27
TRO-201ENST00000173898 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
TRO-201ENST00000173898 DCAF1Q9Y4B6 1507 aa16.63■□□□□ 0.25
TRO-201ENST00000173898 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
TRO-201ENST00000173898 SCRIBQ14160 1630 aa16.61■□□□□ 0.25
TRO-201ENST00000173898 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
TRO-201ENST00000173898 TONSLQ96HA7 1378 aa16.53■□□□□ 0.24
TRO-201ENST00000173898 CANXP27824 592 aaKnown RBP16.52■□□□□ 0.23
TRO-201ENST00000173898 FKBP8Q14318 412 aa16.5■□□□□ 0.23
TRO-201ENST00000173898 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
TRO-201ENST00000173898 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
TRO-201ENST00000173898 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRO-201ENST00000173898 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
TRO-201ENST00000173898 CHIC2Q9UKJ5 165 aa16.42■□□□□ 0.22
TRO-201ENST00000173898 NEFMP07197 916 aa16.42■□□□□ 0.22
TRO-201ENST00000173898 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
TRO-201ENST00000173898 SLC24A1O60721 1099 aa16.39■□□□□ 0.21
TRO-201ENST00000173898 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
TRO-201ENST00000173898 MIER1Q8N108 512 aa16.37■□□□□ 0.21
TRO-201ENST00000173898 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
TRO-201ENST00000173898 SALL2Q9Y467 1007 aaPredicted RBP16.34■□□□□ 0.21
TRO-201ENST00000173898 CLIP1P30622 1438 aa16.33■□□□□ 0.2
TRO-201ENST00000173898 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
TRO-201ENST00000173898 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
TRO-201ENST00000173898 SCAF1Q9H7N4 1312 aaKnown RBP16.3■□□□□ 0.2
TRO-201ENST00000173898 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
TRO-201ENST00000173898 MTUS2Q5JR59 1369 aa16.29■□□□□ 0.2
TRO-201ENST00000173898 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
TRO-201ENST00000173898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.193e-7■■■■□ 21.1
TRO-201ENST00000173898 MRS2Q9HD23 443 aa16.26■□□□□ 0.19
TRO-201ENST00000173898 TSPY4P0CV99 314 aa16.25■□□□□ 0.19
TRO-201ENST00000173898 TSPY10P0CW01 314 aa16.25■□□□□ 0.19
TRO-201ENST00000173898 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
TRO-201ENST00000173898 CCDC136Q96JN2 1154 aa16.23■□□□□ 0.19
TRO-201ENST00000173898 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
TRO-201ENST00000173898 RRP7BPQ9NSQ0 103 aa16.19■□□□□ 0.18
TRO-201ENST00000173898 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
TRO-201ENST00000173898 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
TRO-201ENST00000173898 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
TRO-201ENST00000173898 EIF4G2P78344 907 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRO-201ENST00000173898 EEA1Q15075 1411 aa16.17■□□□□ 0.18
TRO-201ENST00000173898 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
TRO-201ENST00000173898 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRO-201ENST00000173898 GOLGA3Q08378 1498 aa16.14■□□□□ 0.18
TRO-201ENST00000173898 UPF2Q9HAU5 1272 aaKnown RBP16.14■□□□□ 0.17
TRO-201ENST00000173898 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
TRO-201ENST00000173898 HSP90AA1P07900 732 aaKnown RBP16.13■□□□□ 0.17
TRO-201ENST00000173898 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms