RNA–Protein interactions for RNA: ENSMUST00000226433.1

Cthrc1-204, Transcript of Collagen triple helix repeat-containing protein 1, mousemouse

BASIC

Gene Cthrc1, Length 596 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1-204ENSMUST00000226433 Gm35339A0A140LHH9 1649 aa17.33■□□□□ 0.37
Cthrc1-204ENSMUST00000226433 NischQ80TM9 1593 aa17■□□□□ 0.31
Cthrc1-204ENSMUST00000226433 Abcc9P70170 1546 aa16.65■□□□□ 0.26
Cthrc1-204ENSMUST00000226433 Abcc8B2RUS7 1588 aa16.51■□□□□ 0.23
Cthrc1-204ENSMUST00000226433 ScribQ80U72 1612 aa16.13■□□□□ 0.17
Cthrc1-204ENSMUST00000226433 Mapk8ip2Q9ERE9 830 aa16.02■□□□□ 0.16
Cthrc1-204ENSMUST00000226433 Chic1Q8CBW7 227 aa15.91■□□□□ 0.14
Cthrc1-204ENSMUST00000226433 NacadQ5SWP3 1504 aa15.63■□□□□ 0.09
Cthrc1-204ENSMUST00000226433 Kdm5dQ62240 1548 aa15.53■□□□□ 0.08
Cthrc1-204ENSMUST00000226433 Dnajc5bQ9CQ94 199 aa15.4■□□□□ 0.06
Cthrc1-204ENSMUST00000226433 Sycp2Q9CUU3 1500 aa15.33■□□□□ 0.04
Cthrc1-204ENSMUST00000226433 BicraF8VPZ9 1578 aa15.17■□□□□ 0.02
Cthrc1-204ENSMUST00000226433 Dcaf1Q80TR8 1506 aa15.09■□□□□ 0.01
Cthrc1-204ENSMUST00000226433 Pds5bQ4VA53 1446 aaKnown RBP14.87□□□□□ -0.03
Cthrc1-204ENSMUST00000226433 Thoc2B1AZI6 1594 aaKnown RBP14.83□□□□□ -0.04
Cthrc1-204ENSMUST00000226433 Rb1cc1Q9ESK9 1588 aa14.77□□□□□ -0.04
Cthrc1-204ENSMUST00000226433 Ccdc180J3QNE4 1664 aa14.77□□□□□ -0.05
Cthrc1-204ENSMUST00000226433 Atad2bE9Q166 1460 aaKnown RBP14.63□□□□□ -0.07
Cthrc1-204ENSMUST00000226433 Cc2d2aQ8CFW7 1633 aa14.63□□□□□ -0.07
Cthrc1-204ENSMUST00000226433 Ercc6F8VPZ5 1481 aa14.54□□□□□ -0.08
Cthrc1-204ENSMUST00000226433 Crybg2B7ZCC2 1516 aa14.54□□□□□ -0.08
Cthrc1-204ENSMUST00000226433 Baz1aO88379 1555 aa14.53□□□□□ -0.08
Cthrc1-204ENSMUST00000226433 Rhox8Q6VSS7 320 aa14.43□□□□□ -0.1
Cthrc1-204ENSMUST00000226433 Zcchc6Q5BLK4 1491 aaKnown RBP14.43□□□□□ -0.1
Cthrc1-204ENSMUST00000226433 Smarca2Q6DIC0 1577 aa14.42□□□□□ -0.1
Cthrc1-204ENSMUST00000226433 Fam135aQ6NS59 1506 aa14.41□□□□□ -0.1
Cthrc1-204ENSMUST00000226433 Dnajc5P60904 198 aa14.35□□□□□ -0.11
Cthrc1-204ENSMUST00000226433 Smarca4Q3TKT4 1613 aaKnown RBP14.34□□□□□ -0.11
Cthrc1-204ENSMUST00000226433 Iqgap2Q3UQ44 1575 aa14.33□□□□□ -0.12
Cthrc1-204ENSMUST00000226433 Phf23Q8BSN5 401 aa14.31□□□□□ -0.12
Cthrc1-204ENSMUST00000226433 Phldb1Q6PDH0 1371 aaKnown RBP14.3□□□□□ -0.12
Cthrc1-204ENSMUST00000226433 Ubl4bQ9CQ84 188 aa14.27□□□□□ -0.13
Cthrc1-204ENSMUST00000226433 Rtl1Q7M732 1744 aa14.27□□□□□ -0.13
Cthrc1-204ENSMUST00000226433 Frmpd1A2AKB4 1549 aa14.25□□□□□ -0.13
Cthrc1-204ENSMUST00000226433 Wdr62Q3U3T8 1523 aa14.25□□□□□ -0.13
Cthrc1-204ENSMUST00000226433 Baz1bQ9Z277 1479 aa14.25□□□□□ -0.13
Cthrc1-204ENSMUST00000226433 Trim41Q5NCC3 630 aa14.21□□□□□ -0.13
Cthrc1-204ENSMUST00000226433 Cecr2E9Q2Z1 1453 aa14.19□□□□□ -0.14
Cthrc1-204ENSMUST00000226433 Mrc2Q64449 1479 aa14.12□□□□□ -0.15
Cthrc1-204ENSMUST00000226433 Unc13aQ4KUS2 1712 aa14.04□□□□□ -0.16
Cthrc1-204ENSMUST00000226433 Lrriq1Q0P5X1 1673 aa13.85□□□□□ -0.19
Cthrc1-204ENSMUST00000226433 Rsf1E9PWW9 1441 aaKnown RBP13.8□□□□□ -0.2
Cthrc1-204ENSMUST00000226433 CftrP26361 1476 aa13.79□□□□□ -0.2
Cthrc1-204ENSMUST00000226433 Cttnbp2B9EJA2 1648 aa13.79□□□□□ -0.2
Cthrc1-204ENSMUST00000226433 Cux2P70298 1426 aa13.73□□□□□ -0.21
Cthrc1-204ENSMUST00000226433 Synj1Q8CHC4 1574 aa13.72□□□□□ -0.21
Cthrc1-204ENSMUST00000226433 Shroom2A2ALU4 1481 aa13.68□□□□□ -0.22
Cthrc1-204ENSMUST00000226433 Brd4Q9ESU6 1400 aaKnown RBP13.68□□□□□ -0.22
Cthrc1-204ENSMUST00000226433 Kif21aQ9QXL2 1672 aa13.68□□□□□ -0.22
Cthrc1-204ENSMUST00000226433 Esf1Q3V1V3 845 aaKnown RBP13.67□□□□□ -0.22
Cthrc1-204ENSMUST00000226433 Kif15Q6P9L6 1387 aa13.66□□□□□ -0.22
Cthrc1-204ENSMUST00000226433 Npm1Q61937 292 aaKnown RBP13.64□□□□□ -0.23
Cthrc1-204ENSMUST00000226433 Eif4g3Q80XI3 1579 aaKnown RBP13.62□□□□□ -0.23
Cthrc1-204ENSMUST00000226433 Col17a1Q07563 1470 aa13.6□□□□□ -0.23
Cthrc1-204ENSMUST00000226433 Ccdc136Q3TVA9 1136 aa13.58□□□□□ -0.24
Cthrc1-204ENSMUST00000226433 Pabpn1Q8CCS6 302 aaKnown RBP13.58□□□□□ -0.24
Cthrc1-204ENSMUST00000226433 Gab3Q8BSM5 595 aa13.55□□□□□ -0.24
Cthrc1-204ENSMUST00000226433 Top2bQ64511 1612 aa13.5□□□□□ -0.25
Cthrc1-204ENSMUST00000226433 Cep164Q5DU05 1446 aa13.49□□□□□ -0.25
Cthrc1-204ENSMUST00000226433 Lamc3Q9R0B6 1581 aa13.48□□□□□ -0.25
Cthrc1-204ENSMUST00000226433 Urb2E9Q7L1 1524 aaKnown RBP13.48□□□□□ -0.25
Cthrc1-204ENSMUST00000226433 Pelp1Q9DBD5 1123 aaKnown RBP13.47□□□□□ -0.25
Cthrc1-204ENSMUST00000226433 Plppr3Q7TPB0 716 aa13.43□□□□□ -0.26
Cthrc1-204ENSMUST00000226433 Plb1Q3TTY0 1478 aa13.42□□□□□ -0.26
Cthrc1-204ENSMUST00000226433 Il27Q8K3I6 234 aa13.41□□□□□ -0.26
Cthrc1-204ENSMUST00000226433 Dhx29Q6PGC1 1365 aaKnown RBP13.4□□□□□ -0.26
Cthrc1-204ENSMUST00000226433 Zcchc11B2RX14 1644 aaKnown RBP13.34□□□□□ -0.27
Cthrc1-204ENSMUST00000226433 Ccdc18Q640L5 1455 aa13.33□□□□□ -0.28
Cthrc1-204ENSMUST00000226433 Crocc2F6XLV1 1638 aa13.32□□□□□ -0.28
Cthrc1-204ENSMUST00000226433 LrpprcQ6PB66 1392 aaKnown RBP13.32□□□□□ -0.28
Cthrc1-204ENSMUST00000226433 Ift140E9PY46 1464 aa13.29□□□□□ -0.28
Cthrc1-204ENSMUST00000226433 Rusc2Q80U22 1514 aa13.29□□□□□ -0.28
Cthrc1-204ENSMUST00000226433 Pcdh10E9PXQ7 1057 aa13.28□□□□□ -0.28
Cthrc1-204ENSMUST00000226433 TnnQ80Z71 1560 aa13.26□□□□□ -0.29
Cthrc1-204ENSMUST00000226433 Golga3P55937 1487 aa13.25□□□□□ -0.29
Cthrc1-204ENSMUST00000226433 Ttbk1Q6PCN3 1308 aa13.23□□□□□ -0.29
Cthrc1-204ENSMUST00000226433 Camsap1A2AHC3 1581 aa13.19□□□□□ -0.3
Cthrc1-204ENSMUST00000226433 Arhgef5E9Q7D5 1581 aa13.19□□□□□ -0.3
Cthrc1-204ENSMUST00000226433 PogzQ8BZH4 1409 aaKnown RBP13.18□□□□□ -0.3
Cthrc1-204ENSMUST00000226433 Adgrl3Q80TS3 1537 aa13.16□□□□□ -0.3
Cthrc1-204ENSMUST00000226433 Duox2A2AQ99 1517 aa13.13□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 Disp1Q3TDN0 1521 aa13.13□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 PtprkP35822 1457 aa13.12□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 Gm156Q58A37 223 aa13.11□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 Cc2d2bA0A286YDU8 1405 aa13.1□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 Setd1bQ8CFT2 1985 aa13.1□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 Cngb1E1AZ71 1325 aa13.1□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 Fmn1Q05860 1466 aa13.1□□□□□ -0.31
Cthrc1-204ENSMUST00000226433 PtprtQ99M80 1454 aa13.06□□□□□ -0.32
Cthrc1-204ENSMUST00000226433 Cep170Q6A065 1588 aa13.06□□□□□ -0.32
Cthrc1-204ENSMUST00000226433 Gapvd1Q6PAR5 1458 aa13.05□□□□□ -0.32
Cthrc1-204ENSMUST00000226433 Pbrm1Q8BSQ9 1634 aaKnown RBP13.05□□□□□ -0.32
Cthrc1-204ENSMUST00000226433 Nup160Q9Z0W3 1402 aaKnown RBP13.05□□□□□ -0.32
Cthrc1-204ENSMUST00000226433 Fgd6Q69ZL1 1399 aa13.04□□□□□ -0.32
Cthrc1-204ENSMUST00000226433 Grin2bQ01097 1482 aa12.98□□□□□ -0.33
Cthrc1-204ENSMUST00000226433 Samd9lQ69Z37 1561 aa12.98□□□□□ -0.33
Cthrc1-204ENSMUST00000226433 AqrQ8CFQ3 1481 aaKnown RBP12.96□□□□□ -0.34
Cthrc1-204ENSMUST00000226433 Efcab5A0JP43 1406 aa12.96□□□□□ -0.34
Cthrc1-204ENSMUST00000226433 AknaQ80VW7 1404 aa12.96□□□□□ -0.34
Cthrc1-204ENSMUST00000226433 Senp3Q9EP97 568 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 63.3 ms