RNA–Protein interactions for RNA: ENSMUST00000221370.1

Trim9-208, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

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Gene Trim9, Length 2,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-208ENSMUST00000221370 NischQ80TM9 1593 aa40.49■■■■■ 4.07
Trim9-208ENSMUST00000221370 Gm35339A0A140LHH9 1649 aa39.76■■■■□ 3.96
Trim9-208ENSMUST00000221370 Abcc9P70170 1546 aa39.41■■■■□ 3.9
Trim9-208ENSMUST00000221370 Abcc8B2RUS7 1588 aa38.38■■■■□ 3.73
Trim9-208ENSMUST00000221370 Rtl1Q7M732 1744 aa37.89■■■■□ 3.66
Trim9-208ENSMUST00000221370 Rhox8Q6VSS7 320 aa37.64■■■■□ 3.62
Trim9-208ENSMUST00000221370 Ccdc180J3QNE4 1664 aa37.2■■■■□ 3.55
Trim9-208ENSMUST00000221370 Zcchc6Q5BLK4 1491 aaKnown RBP36.31■■■■□ 3.4
Trim9-208ENSMUST00000221370 Dcaf1Q80TR8 1506 aa36.06■■■■□ 3.36
Trim9-208ENSMUST00000221370 Rpgrip1Q9EPQ2 1331 aa35.9■■■■□ 3.34
Trim9-208ENSMUST00000221370 ScribQ80U72 1612 aa35.52■■■■□ 3.28
Trim9-208ENSMUST00000221370 Rb1cc1Q9ESK9 1588 aa35.49■■■■□ 3.27
Trim9-208ENSMUST00000221370 HrcG5E8J6 738 aa35.39■■■■□ 3.26
Trim9-208ENSMUST00000221370 Baz1aO88379 1555 aa35.16■■■■□ 3.22
Trim9-208ENSMUST00000221370 Acin1Q9JIX8 1338 aaKnown RBP35.06■■■■□ 3.2
Trim9-208ENSMUST00000221370 Kdm5dQ62240 1548 aa34.97■■■■□ 3.19
Trim9-208ENSMUST00000221370 Ccdc136Q3TVA9 1136 aa34.83■■■■□ 3.17
Trim9-208ENSMUST00000221370 NacadQ5SWP3 1504 aa34.7■■■■□ 3.15
Trim9-208ENSMUST00000221370 Crybg2B7ZCC2 1516 aa34.57■■■■□ 3.13
Trim9-208ENSMUST00000221370 Smarca2Q6DIC0 1577 aa34.41■■■■□ 3.1
Trim9-208ENSMUST00000221370 Trim41Q5NCC3 630 aa34.36■■■■□ 3.09
Trim9-208ENSMUST00000221370 Ehmt2Q9Z148 1263 aaKnown RBP34.31■■■■□ 3.08
Trim9-208ENSMUST00000221370 Cep164Q5DU05 1446 aa34.2■■■■□ 3.07
Trim9-208ENSMUST00000221370 Sycp2Q9CUU3 1500 aa33.91■■■■□ 3.02
Trim9-208ENSMUST00000221370 Pcgf6Q99NA9 353 aa33.69■■■□□ 2.98
Trim9-208ENSMUST00000221370 Brd4Q9ESU6 1400 aaKnown RBP33.61■■■□□ 2.97
Trim9-208ENSMUST00000221370 Rsf1E9PWW9 1441 aaKnown RBP33.51■■■□□ 2.95
Trim9-208ENSMUST00000221370 Golga3P55937 1487 aa33.36■■■□□ 2.93
Trim9-208ENSMUST00000221370 Chic1Q8CBW7 227 aa33.34■■■□□ 2.93
Trim9-208ENSMUST00000221370 Cecr2E9Q2Z1 1453 aa33.33■■■□□ 2.93
Trim9-208ENSMUST00000221370 Cngb1E1AZ71 1325 aa33.31■■■□□ 2.92
Trim9-208ENSMUST00000221370 Ccdc88bQ4QRL3 1481 aa33.2■■■□□ 2.91
Trim9-208ENSMUST00000221370 Synj1Q8CHC4 1574 aa33.19■■■□□ 2.9
Trim9-208ENSMUST00000221370 BicraF8VPZ9 1578 aa33.05■■■□□ 2.88
Trim9-208ENSMUST00000221370 Gab3Q8BSM5 595 aa33.04■■■□□ 2.88
Trim9-208ENSMUST00000221370 Supt5hO55201 1082 aaKnown RBP33■■■□□ 2.87
Trim9-208ENSMUST00000221370 CftrP26361 1476 aa33■■■□□ 2.87
Trim9-208ENSMUST00000221370 Top2bQ64511 1612 aa32.96■■■□□ 2.87
Trim9-208ENSMUST00000221370 NefmP08553 848 aa32.91■■■□□ 2.86
Trim9-208ENSMUST00000221370 Cttnbp2B9EJA2 1648 aa32.82■■■□□ 2.84
Trim9-208ENSMUST00000221370 Mier1Q5UAK0 511 aa32.69■■■□□ 2.82
Trim9-208ENSMUST00000221370 Esf1Q3V1V3 845 aaKnown RBP32.68■■■□□ 2.82
Trim9-208ENSMUST00000221370 Smarca4Q3TKT4 1613 aaKnown RBP32.53■■■□□ 2.8
Trim9-208ENSMUST00000221370 Rapgef2Q8CHG7 1496 aa32.49■■■□□ 2.79
Trim9-208ENSMUST00000221370 Cc2d2aQ8CFW7 1633 aa32.49■■■□□ 2.79
Trim9-208ENSMUST00000221370 Zeb1Q64318 1117 aa32.45■■■□□ 2.79
Trim9-208ENSMUST00000221370 Fmn1Q05860 1466 aa32.43■■■□□ 2.78
Trim9-208ENSMUST00000221370 Top2aQ01320 1528 aaKnown RBP32.36■■■□□ 2.77
Trim9-208ENSMUST00000221370 Neurod1Q60867 357 aa32.27■■■□□ 2.76
Trim9-208ENSMUST00000221370 Cep162Q6ZQ06 1403 aa32.17■■■□□ 2.74
Trim9-208ENSMUST00000221370 Sall2Q9QX96 1004 aa32.15■■■□□ 2.74
Trim9-208ENSMUST00000221370 UbtfP25976 765 aaKnown RBP32.03■■■□□ 2.72
Trim9-208ENSMUST00000221370 Iqgap2Q3UQ44 1575 aa32.02■■■□□ 2.72
Trim9-208ENSMUST00000221370 Eif4g1Q6NZJ6 1600 aaKnown RBP31.93■■■□□ 2.7
Trim9-208ENSMUST00000221370 Las1lA2BE28 776 aaKnown RBP31.92■■■□□ 2.7
Trim9-208ENSMUST00000221370 Atad2bE9Q166 1460 aaKnown RBP31.79■■■□□ 2.68
Trim9-208ENSMUST00000221370 TnnQ80Z71 1560 aa31.79■■■□□ 2.68
Trim9-208ENSMUST00000221370 Myt1lP97500 1187 aa31.77■■■□□ 2.68
Trim9-208ENSMUST00000221370 Anks4bQ8K3X6 423 aa31.72■■■□□ 2.67
Trim9-208ENSMUST00000221370 Clip1Q922J3 1391 aa31.7■■■□□ 2.67
Trim9-208ENSMUST00000221370 Npm2Q80W85 207 aa31.7■■■□□ 2.67
Trim9-208ENSMUST00000221370 ClspnQ80YR7 1315 aa31.69■■■□□ 2.66
Trim9-208ENSMUST00000221370 Aebp2Q9Z248 504 aaKnown RBP31.67■■■□□ 2.66
Trim9-208ENSMUST00000221370 Wdr66E9Q743 1299 aa31.61■■■□□ 2.65
Trim9-208ENSMUST00000221370 Ncapd3Q6ZQK0 1506 aa31.59■■■□□ 2.65
Trim9-208ENSMUST00000221370 Pds5bQ4VA53 1446 aaKnown RBP31.55■■■□□ 2.64
Trim9-208ENSMUST00000221370 TonslQ6NZL6 1363 aa31.54■■■□□ 2.64
Trim9-208ENSMUST00000221370 Arhgap35Q91YM2 1499 aa31.52■■■□□ 2.64
Trim9-208ENSMUST00000221370 NrkQ9R0G8 1455 aa31.5■■■□□ 2.63
Trim9-208ENSMUST00000221370 Plekhg3Q4VAC9 1341 aa31.43■■■□□ 2.62
Trim9-208ENSMUST00000221370 Cdk11bP24788 784 aaKnown RBP31.39■■■□□ 2.62
Trim9-208ENSMUST00000221370 Lamc3Q9R0B6 1581 aa31.39■■■□□ 2.62
Trim9-208ENSMUST00000221370 Eea1Q8BL66 1411 aa31.38■■■□□ 2.61
Trim9-208ENSMUST00000221370 Nop58Q6DFW4 536 aaKnown RBP31.35■■■□□ 2.61
Trim9-208ENSMUST00000221370 PtprkP35822 1457 aa31.34■■■□□ 2.61
Trim9-208ENSMUST00000221370 Wdr62Q3U3T8 1523 aa31.33■■■□□ 2.61
Trim9-208ENSMUST00000221370 Frmpd1A2AKB4 1549 aa31.33■■■□□ 2.61
Trim9-208ENSMUST00000221370 Arap1Q4LDD4 1452 aa31.32■■■□□ 2.6
Trim9-208ENSMUST00000221370 Ccdc18Q640L5 1455 aa31.31■■■□□ 2.6
Trim9-208ENSMUST00000221370 Map3k1P53349 1493 aa31.31■■■□□ 2.6
Trim9-208ENSMUST00000221370 Arhgef5E9Q7D5 1581 aa31.27■■■□□ 2.6
Trim9-208ENSMUST00000221370 Shroom4Q1W617 1475 aa31.26■■■□□ 2.59
Trim9-208ENSMUST00000221370 Kdm5bQ80Y84 1544 aa31.2■■■□□ 2.58
Trim9-208ENSMUST00000221370 Camsap1A2AHC3 1581 aa31.16■■■□□ 2.58
Trim9-208ENSMUST00000221370 Csrnp3P59055 597 aa31.14■■■□□ 2.58
Trim9-208ENSMUST00000221370 Setd5Q5XJV7 1441 aa31.14■■■□□ 2.57
Trim9-208ENSMUST00000221370 1700123L14RikQ3V2K7 440 aa31.13■■■□□ 2.57
Trim9-208ENSMUST00000221370 Kif15Q6P9L6 1387 aa31.09■■■□□ 2.57
Trim9-208ENSMUST00000221370 TchhA0A0B4J1F9 1599 aa31.08■■■□□ 2.57
Trim9-208ENSMUST00000221370 Tiam1Q60610 1591 aa31.07■■■□□ 2.56
Trim9-208ENSMUST00000221370 Erich3F6QRE9 1637 aa31.01■■■□□ 2.55
Trim9-208ENSMUST00000221370 Mroh2bQ7M6Y6 1581 aa30.99■■■□□ 2.55
Trim9-208ENSMUST00000221370 Grin2bQ01097 1482 aa30.98■■■□□ 2.55
Trim9-208ENSMUST00000221370 Ercc6F8VPZ5 1481 aa30.97■■■□□ 2.55
Trim9-208ENSMUST00000221370 Aplp2Q06335 707 aa30.97■■■□□ 2.55
Trim9-208ENSMUST00000221370 Ppargc1bQ8VHJ7 1014 aa30.97■■■□□ 2.55
Trim9-208ENSMUST00000221370 Unc13aQ4KUS2 1712 aa30.96■■■□□ 2.55
Trim9-208ENSMUST00000221370 AqrQ8CFQ3 1481 aaKnown RBP30.93■■■□□ 2.54
Trim9-208ENSMUST00000221370 Naip1Q9QWK5 1403 aa30.91■■■□□ 2.54
Trim9-208ENSMUST00000221370 Il27Q8K3I6 234 aa30.91■■■□□ 2.54
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms