RNA–Protein interactions for RNA: ENSMUST00000204189.2

Tra2a-204, Transcript of Transformer-2 protein homolog alpha, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tra2a, Length 1,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2a-204ENSMUST00000204189 Gm35339A0A140LHH9 1649 aa38.18■■■■□ 3.7
Tra2a-204ENSMUST00000204189 NischQ80TM9 1593 aa37.84■■■■□ 3.65
Tra2a-204ENSMUST00000204189 Abcc9P70170 1546 aa36.7■■■■□ 3.47
Tra2a-204ENSMUST00000204189 Abcc8B2RUS7 1588 aa36.41■■■■□ 3.42
Tra2a-204ENSMUST00000204189 ScribQ80U72 1612 aa34.82■■■■□ 3.17
Tra2a-204ENSMUST00000204189 Kdm5dQ62240 1548 aa33.79■■■■□ 3
Tra2a-204ENSMUST00000204189 NacadQ5SWP3 1504 aa33.76■■■■□ 3
Tra2a-204ENSMUST00000204189 Dcaf1Q80TR8 1506 aa33.71■■■□□ 2.99
Tra2a-204ENSMUST00000204189 Rhox8Q6VSS7 320 aa33.14■■■□□ 2.9
Tra2a-204ENSMUST00000204189 Sycp2Q9CUU3 1500 aa33.07■■■□□ 2.88
Tra2a-204ENSMUST00000204189 Rb1cc1Q9ESK9 1588 aa33.06■■■□□ 2.88
Tra2a-204ENSMUST00000204189 Ccdc180J3QNE4 1664 aa32.77■■■□□ 2.84
Tra2a-204ENSMUST00000204189 Baz1aO88379 1555 aa32.62■■■□□ 2.81
Tra2a-204ENSMUST00000204189 BicraF8VPZ9 1578 aa32.54■■■□□ 2.8
Tra2a-204ENSMUST00000204189 Crybg2B7ZCC2 1516 aa32.38■■■□□ 2.77
Tra2a-204ENSMUST00000204189 Zcchc6Q5BLK4 1491 aaKnown RBP32■■■□□ 2.71
Tra2a-204ENSMUST00000204189 Rtl1Q7M732 1744 aa31.84■■■□□ 2.69
Tra2a-204ENSMUST00000204189 Smarca2Q6DIC0 1577 aa31.73■■■□□ 2.67
Tra2a-204ENSMUST00000204189 Pds5bQ4VA53 1446 aaKnown RBP31.48■■■□□ 2.63
Tra2a-204ENSMUST00000204189 Cecr2E9Q2Z1 1453 aa31.33■■■□□ 2.61
Tra2a-204ENSMUST00000204189 Smarca4Q3TKT4 1613 aaKnown RBP31.31■■■□□ 2.6
Tra2a-204ENSMUST00000204189 Atad2bE9Q166 1460 aaKnown RBP31.3■■■□□ 2.6
Tra2a-204ENSMUST00000204189 Thoc2B1AZI6 1594 aaKnown RBP31.06■■■□□ 2.56
Tra2a-204ENSMUST00000204189 Iqgap2Q3UQ44 1575 aa31.06■■■□□ 2.56
Tra2a-204ENSMUST00000204189 Ccdc136Q3TVA9 1136 aa30.91■■■□□ 2.54
Tra2a-204ENSMUST00000204189 Ercc6F8VPZ5 1481 aa30.87■■■□□ 2.53
Tra2a-204ENSMUST00000204189 Brd4Q9ESU6 1400 aaKnown RBP30.83■■■□□ 2.53
Tra2a-204ENSMUST00000204189 Cttnbp2B9EJA2 1648 aa30.77■■■□□ 2.52
Tra2a-204ENSMUST00000204189 Synj1Q8CHC4 1574 aa30.77■■■□□ 2.52
Tra2a-204ENSMUST00000204189 CftrP26361 1476 aa30.74■■■□□ 2.51
Tra2a-204ENSMUST00000204189 Wdr62Q3U3T8 1523 aa30.7■■■□□ 2.51
Tra2a-204ENSMUST00000204189 Dnajc5bQ9CQ94 199 aa30.69■■■□□ 2.5
Tra2a-204ENSMUST00000204189 Frmpd1A2AKB4 1549 aa30.62■■■□□ 2.49
Tra2a-204ENSMUST00000204189 Cc2d2aQ8CFW7 1633 aa30.58■■■□□ 2.49
Tra2a-204ENSMUST00000204189 Trim41Q5NCC3 630 aa30.5■■■□□ 2.47
Tra2a-204ENSMUST00000204189 Fam135aQ6NS59 1506 aa30.47■■■□□ 2.47
Tra2a-204ENSMUST00000204189 Unc13aQ4KUS2 1712 aa30.36■■■□□ 2.45
Tra2a-204ENSMUST00000204189 Phldb1Q6PDH0 1371 aaKnown RBP30.3■■■□□ 2.44
Tra2a-204ENSMUST00000204189 Esf1Q3V1V3 845 aaKnown RBP30.17■■■□□ 2.42
Tra2a-204ENSMUST00000204189 Baz1bQ9Z277 1479 aa30.12■■■□□ 2.41
Tra2a-204ENSMUST00000204189 Golga3P55937 1487 aa29.95■■■□□ 2.38
Tra2a-204ENSMUST00000204189 Ubl4bQ9CQ84 188 aa29.95■■■□□ 2.38
Tra2a-204ENSMUST00000204189 Top2bQ64511 1612 aa29.92■■■□□ 2.38
Tra2a-204ENSMUST00000204189 Rsf1E9PWW9 1441 aaKnown RBP29.81■■■□□ 2.36
Tra2a-204ENSMUST00000204189 Lamc3Q9R0B6 1581 aa29.76■■■□□ 2.35
Tra2a-204ENSMUST00000204189 Cngb1E1AZ71 1325 aa29.76■■■□□ 2.35
Tra2a-204ENSMUST00000204189 Mrc2Q64449 1479 aa29.72■■■□□ 2.35
Tra2a-204ENSMUST00000204189 Kif15Q6P9L6 1387 aa29.69■■■□□ 2.34
Tra2a-204ENSMUST00000204189 TnnQ80Z71 1560 aa29.62■■■□□ 2.33
Tra2a-204ENSMUST00000204189 Cux2P70298 1426 aa29.54■■■□□ 2.32
Tra2a-204ENSMUST00000204189 Fmn1Q05860 1466 aa29.51■■■□□ 2.31
Tra2a-204ENSMUST00000204189 Camsap1A2AHC3 1581 aa29.3■■■□□ 2.28
Tra2a-204ENSMUST00000204189 Kif21aQ9QXL2 1672 aa29.29■■■□□ 2.28
Tra2a-204ENSMUST00000204189 Ccdc18Q640L5 1455 aa29.28■■■□□ 2.28
Tra2a-204ENSMUST00000204189 Ccdc88bQ4QRL3 1481 aa29.26■■■□□ 2.28
Tra2a-204ENSMUST00000204189 Npm1Q61937 292 aaKnown RBP29.24■■■□□ 2.27
Tra2a-204ENSMUST00000204189 Cep164Q5DU05 1446 aa29.23■■■□□ 2.27
Tra2a-204ENSMUST00000204189 Il27Q8K3I6 234 aa29.11■■■□□ 2.25
Tra2a-204ENSMUST00000204189 HrcG5E8J6 738 aa29.09■■■□□ 2.25
Tra2a-204ENSMUST00000204189 Lrriq1Q0P5X1 1673 aa29.09■■■□□ 2.25
Tra2a-204ENSMUST00000204189 Top2aQ01320 1528 aaKnown RBP29.08■■■□□ 2.25
Tra2a-204ENSMUST00000204189 Chic1Q8CBW7 227 aa29.07■■■□□ 2.24
Tra2a-204ENSMUST00000204189 LrpprcQ6PB66 1392 aaKnown RBP29.01■■■□□ 2.24
Tra2a-204ENSMUST00000204189 Dhx29Q6PGC1 1365 aaKnown RBP28.97■■■□□ 2.23
Tra2a-204ENSMUST00000204189 Grin2bQ01097 1482 aa28.92■■■□□ 2.22
Tra2a-204ENSMUST00000204189 Crocc2F6XLV1 1638 aa28.91■■■□□ 2.22
Tra2a-204ENSMUST00000204189 PogzQ8BZH4 1409 aaKnown RBP28.91■■■□□ 2.22
Tra2a-204ENSMUST00000204189 Urb2E9Q7L1 1524 aaKnown RBP28.8■■■□□ 2.2
Tra2a-204ENSMUST00000204189 Duox2A2AQ99 1517 aa28.79■■■□□ 2.2
Tra2a-204ENSMUST00000204189 Plb1Q3TTY0 1478 aa28.76■■■□□ 2.19
Tra2a-204ENSMUST00000204189 NrkQ9R0G8 1455 aa28.74■■■□□ 2.19
Tra2a-204ENSMUST00000204189 Eif4g3Q80XI3 1579 aaKnown RBP28.69■■■□□ 2.18
Tra2a-204ENSMUST00000204189 Efcab5A0JP43 1406 aa28.67■■■□□ 2.18
Tra2a-204ENSMUST00000204189 Shroom4Q1W617 1475 aa28.65■■■□□ 2.18
Tra2a-204ENSMUST00000204189 Samd9lQ69Z37 1561 aa28.62■■■□□ 2.17
Tra2a-204ENSMUST00000204189 PtprkP35822 1457 aa28.59■■■□□ 2.17
Tra2a-204ENSMUST00000204189 Ift140E9PY46 1464 aa28.57■■■□□ 2.16
Tra2a-204ENSMUST00000204189 Pbrm1Q8BSQ9 1634 aaKnown RBP28.45■■■□□ 2.14
Tra2a-204ENSMUST00000204189 Gab3Q8BSM5 595 aa28.45■■■□□ 2.14
Tra2a-204ENSMUST00000204189 Disp1Q3TDN0 1521 aa28.44■■■□□ 2.14
Tra2a-204ENSMUST00000204189 Setd1bQ8CFT2 1985 aa28.41■■■□□ 2.14
Tra2a-204ENSMUST00000204189 Rapgef2Q8CHG7 1496 aa28.4■■■□□ 2.14
Tra2a-204ENSMUST00000204189 Rusc2Q80U22 1514 aa28.38■■■□□ 2.13
Tra2a-204ENSMUST00000204189 Rad54l2Q99NG0 1466 aa28.36■■■□□ 2.13
Tra2a-204ENSMUST00000204189 Npm2Q80W85 207 aa28.35■■■□□ 2.13
Tra2a-204ENSMUST00000204189 SynmQ70IV5 1561 aa28.35■■■□□ 2.13
Tra2a-204ENSMUST00000204189 Nup160Q9Z0W3 1402 aaKnown RBP28.32■■■□□ 2.12
Tra2a-204ENSMUST00000204189 Magi3Q9EQJ9 1476 aa28.3■■■□□ 2.12
Tra2a-204ENSMUST00000204189 Mroh2bQ7M6Y6 1581 aa28.27■■■□□ 2.12
Tra2a-204ENSMUST00000204189 Grin2aP35436 1464 aa28.27■■■□□ 2.12
Tra2a-204ENSMUST00000204189 Eif4g1Q6NZJ6 1600 aaKnown RBP28.25■■■□□ 2.11
Tra2a-204ENSMUST00000204189 Gpatch8A2A6A1 1505 aa28.23■■■□□ 2.11
Tra2a-204ENSMUST00000204189 Zeb1Q64318 1117 aa28.23■■■□□ 2.11
Tra2a-204ENSMUST00000204189 Cc2d2bA0A286YDU8 1405 aa28.22■■■□□ 2.11
Tra2a-204ENSMUST00000204189 Arhgap35Q91YM2 1499 aa28.2■■■□□ 2.11
Tra2a-204ENSMUST00000204189 Pla2r1Q62028 1487 aa28.2■■■□□ 2.1
Tra2a-204ENSMUST00000204189 Map3k1P53349 1493 aa28.18■■■□□ 2.1
Tra2a-204ENSMUST00000204189 Cep162Q6ZQ06 1403 aa28.18■■■□□ 2.1
Tra2a-204ENSMUST00000204189 AqrQ8CFQ3 1481 aaKnown RBP28.09■■■□□ 2.09
Tra2a-204ENSMUST00000204189 Carmil1Q6EDY6 1374 aa28.03■■■□□ 2.08
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms