RNA–Protein interactions for RNA: ENSMUST00000198633.4

Chfr-207, Transcript of E3 ubiquitin-protein ligase CHFR, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Chfr, Length 2,623 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chfr-207ENSMUST00000198633 NischQ80TM9 1593 aa27.94■■■□□ 2.06
Chfr-207ENSMUST00000198633 Gm35339A0A140LHH9 1649 aa27.22■■□□□ 1.95
Chfr-207ENSMUST00000198633 Abcc9P70170 1546 aa27.07■■□□□ 1.92
Chfr-207ENSMUST00000198633 Abcc8B2RUS7 1588 aa26.47■■□□□ 1.83
Chfr-207ENSMUST00000198633 Rhox8Q6VSS7 320 aa26.3■■□□□ 1.8
Chfr-207ENSMUST00000198633 Rtl1Q7M732 1744 aa25.63■■□□□ 1.69
Chfr-207ENSMUST00000198633 Ccdc180J3QNE4 1664 aa25.29■■□□□ 1.64
Chfr-207ENSMUST00000198633 Zcchc6Q5BLK4 1491 aaKnown RBP24.8■■□□□ 1.56
Chfr-207ENSMUST00000198633 Dcaf1Q80TR8 1506 aa24.6■■□□□ 1.53
Chfr-207ENSMUST00000198633 ScribQ80U72 1612 aa24.6■■□□□ 1.53
Chfr-207ENSMUST00000198633 Rb1cc1Q9ESK9 1588 aa24.48■■□□□ 1.51
Chfr-207ENSMUST00000198633 Ccdc136Q3TVA9 1136 aa24.42■■□□□ 1.5
Chfr-207ENSMUST00000198633 HrcG5E8J6 738 aa24.22■■□□□ 1.47
Chfr-207ENSMUST00000198633 Kdm5dQ62240 1548 aa24.2■■□□□ 1.46
Chfr-207ENSMUST00000198633 Rpgrip1Q9EPQ2 1331 aa24.18■■□□□ 1.46
Chfr-207ENSMUST00000198633 Baz1aO88379 1555 aa24.17■■□□□ 1.46
Chfr-207ENSMUST00000198633 Ehmt2Q9Z148 1263 aaKnown RBP24.02■■□□□ 1.44
Chfr-207ENSMUST00000198633 NacadQ5SWP3 1504 aa23.96■■□□□ 1.43
Chfr-207ENSMUST00000198633 Acin1Q9JIX8 1338 aaKnown RBP23.9■■□□□ 1.42
Chfr-207ENSMUST00000198633 Trim41Q5NCC3 630 aa23.84■■□□□ 1.41
Chfr-207ENSMUST00000198633 Crybg2B7ZCC2 1516 aa23.63■■□□□ 1.37
Chfr-207ENSMUST00000198633 Smarca2Q6DIC0 1577 aa23.62■■□□□ 1.37
Chfr-207ENSMUST00000198633 Sycp2Q9CUU3 1500 aa23.44■■□□□ 1.34
Chfr-207ENSMUST00000198633 Cep164Q5DU05 1446 aa23.4■■□□□ 1.34
Chfr-207ENSMUST00000198633 Cngb1E1AZ71 1325 aa23.3■■□□□ 1.32
Chfr-207ENSMUST00000198633 Chic1Q8CBW7 227 aa23.23■■□□□ 1.31
Chfr-207ENSMUST00000198633 Cecr2E9Q2Z1 1453 aa23.16■■□□□ 1.3
Chfr-207ENSMUST00000198633 Gab3Q8BSM5 595 aa23.15■■□□□ 1.3
Chfr-207ENSMUST00000198633 Rsf1E9PWW9 1441 aaKnown RBP23.14■■□□□ 1.3
Chfr-207ENSMUST00000198633 Brd4Q9ESU6 1400 aaKnown RBP23.13■■□□□ 1.29
Chfr-207ENSMUST00000198633 Pcgf6Q99NA9 353 aa23.04■■□□□ 1.28
Chfr-207ENSMUST00000198633 Ccdc88bQ4QRL3 1481 aa22.98■■□□□ 1.27
Chfr-207ENSMUST00000198633 Golga3P55937 1487 aa22.96■■□□□ 1.27
Chfr-207ENSMUST00000198633 Synj1Q8CHC4 1574 aa22.95■■□□□ 1.26
Chfr-207ENSMUST00000198633 BicraF8VPZ9 1578 aa22.93■■□□□ 1.26
Chfr-207ENSMUST00000198633 Esf1Q3V1V3 845 aaKnown RBP22.9■■□□□ 1.26
Chfr-207ENSMUST00000198633 CftrP26361 1476 aa22.77■■□□□ 1.24
Chfr-207ENSMUST00000198633 Supt5hO55201 1082 aaKnown RBP22.7■■□□□ 1.22
Chfr-207ENSMUST00000198633 Top2bQ64511 1612 aa22.6■■□□□ 1.21
Chfr-207ENSMUST00000198633 Mier1Q5UAK0 511 aa22.6■■□□□ 1.21
Chfr-207ENSMUST00000198633 Cttnbp2B9EJA2 1648 aa22.56■■□□□ 1.2
Chfr-207ENSMUST00000198633 Zeb1Q64318 1117 aa22.5■■□□□ 1.19
Chfr-207ENSMUST00000198633 NefmP08553 848 aa22.46■■□□□ 1.19
Chfr-207ENSMUST00000198633 Smarca4Q3TKT4 1613 aaKnown RBP22.45■■□□□ 1.19
Chfr-207ENSMUST00000198633 Cc2d2aQ8CFW7 1633 aa22.45■■□□□ 1.19
Chfr-207ENSMUST00000198633 UbtfP25976 765 aaKnown RBP22.31■■□□□ 1.16
Chfr-207ENSMUST00000198633 Rapgef2Q8CHG7 1496 aa22.29■■□□□ 1.16
Chfr-207ENSMUST00000198633 Fmn1Q05860 1466 aa22.28■■□□□ 1.16
Chfr-207ENSMUST00000198633 Myt1lP97500 1187 aa22.27■■□□□ 1.16
Chfr-207ENSMUST00000198633 Top2aQ01320 1528 aaKnown RBP22.2■■□□□ 1.15
Chfr-207ENSMUST00000198633 Cep162Q6ZQ06 1403 aa22.16■■□□□ 1.14
Chfr-207ENSMUST00000198633 Iqgap2Q3UQ44 1575 aa22.16■■□□□ 1.14
Chfr-207ENSMUST00000198633 Npm2Q80W85 207 aa22.14■■□□□ 1.13
Chfr-207ENSMUST00000198633 Sall2Q9QX96 1004 aa22.13■■□□□ 1.13
Chfr-207ENSMUST00000198633 Neurod1Q60867 357 aa22.09■■□□□ 1.13
Chfr-207ENSMUST00000198633 Atad2bE9Q166 1460 aaKnown RBP22■■□□□ 1.11
Chfr-207ENSMUST00000198633 Clip1Q922J3 1391 aa21.93■■□□□ 1.1
Chfr-207ENSMUST00000198633 Plekhg3Q4VAC9 1341 aa21.93■■□□□ 1.1
Chfr-207ENSMUST00000198633 Las1lA2BE28 776 aaKnown RBP21.92■■□□□ 1.1
Chfr-207ENSMUST00000198633 Aebp2Q9Z248 504 aaKnown RBP21.9■■□□□ 1.1
Chfr-207ENSMUST00000198633 Wdr66E9Q743 1299 aa21.89■■□□□ 1.09
Chfr-207ENSMUST00000198633 Pds5bQ4VA53 1446 aaKnown RBP21.85■■□□□ 1.09
Chfr-207ENSMUST00000198633 Eif4g1Q6NZJ6 1600 aaKnown RBP21.82■■□□□ 1.08
Chfr-207ENSMUST00000198633 Il27Q8K3I6 234 aa21.81■■□□□ 1.08
Chfr-207ENSMUST00000198633 TnnQ80Z71 1560 aa21.79■■□□□ 1.08
Chfr-207ENSMUST00000198633 PtprkP35822 1457 aa21.74■■□□□ 1.07
Chfr-207ENSMUST00000198633 Frmpd1A2AKB4 1549 aa21.74■■□□□ 1.07
Chfr-207ENSMUST00000198633 Ppargc1bQ8VHJ7 1014 aa21.73■■□□□ 1.07
Chfr-207ENSMUST00000198633 Arhgap35Q91YM2 1499 aa21.72■■□□□ 1.07
Chfr-207ENSMUST00000198633 TonslQ6NZL6 1363 aa21.7■■□□□ 1.06
Chfr-207ENSMUST00000198633 Ap3b1Q9Z1T1 1105 aa21.7■■□□□ 1.06
Chfr-207ENSMUST00000198633 Wdr62Q3U3T8 1523 aa21.66■■□□□ 1.06
Chfr-207ENSMUST00000198633 Kif15Q6P9L6 1387 aa21.65■■□□□ 1.06
Chfr-207ENSMUST00000198633 ClspnQ80YR7 1315 aa21.65■■□□□ 1.06
Chfr-207ENSMUST00000198633 Ncapd3Q6ZQK0 1506 aa21.64■■□□□ 1.06
Chfr-207ENSMUST00000198633 NrkQ9R0G8 1455 aa21.62■■□□□ 1.05
Chfr-207ENSMUST00000198633 Lamc3Q9R0B6 1581 aa21.61■■□□□ 1.05
Chfr-207ENSMUST00000198633 Eea1Q8BL66 1411 aa21.6■■□□□ 1.05
Chfr-207ENSMUST00000198633 Arap1Q4LDD4 1452 aa21.58■■□□□ 1.04
Chfr-207ENSMUST00000198633 Anks4bQ8K3X6 423 aa21.56■■□□□ 1.04
Chfr-207ENSMUST00000198633 Setd5Q5XJV7 1441 aa21.55■■□□□ 1.04
Chfr-207ENSMUST00000198633 Shroom4Q1W617 1475 aa21.52■■□□□ 1.04
Chfr-207ENSMUST00000198633 Nop58Q6DFW4 536 aaKnown RBP21.49■■□□□ 1.03
Chfr-207ENSMUST00000198633 Cdk11bP24788 784 aaKnown RBP21.49■■□□□ 1.03
Chfr-207ENSMUST00000198633 Ercc6F8VPZ5 1481 aa21.48■■□□□ 1.03
Chfr-207ENSMUST00000198633 Camsap1A2AHC3 1581 aa21.48■■□□□ 1.03
Chfr-207ENSMUST00000198633 Unc13aQ4KUS2 1712 aa21.47■■□□□ 1.03
Chfr-207ENSMUST00000198633 Arhgef5E9Q7D5 1581 aa21.46■■□□□ 1.03
Chfr-207ENSMUST00000198633 Eid3Q3V124 375 aa21.45■■□□□ 1.02
Chfr-207ENSMUST00000198633 Ccdc18Q640L5 1455 aa21.4■■□□□ 1.02
Chfr-207ENSMUST00000198633 Map3k1P53349 1493 aa21.4■■□□□ 1.02
Chfr-207ENSMUST00000198633 Grin2bQ01097 1482 aa21.38■■□□□ 1.01
Chfr-207ENSMUST00000198633 Csrnp3P59055 597 aa21.37■■□□□ 1.01
Chfr-207ENSMUST00000198633 Mroh2bQ7M6Y6 1581 aa21.35■■□□□ 1.01
Chfr-207ENSMUST00000198633 BlmO88700 1416 aa21.34■■□□□ 1.01
Chfr-207ENSMUST00000198633 Baz1bQ9Z277 1479 aa21.33■■□□□ 1.01
Chfr-207ENSMUST00000198633 Tiam1Q60610 1591 aa21.31■■□□□ 1
Chfr-207ENSMUST00000198633 Kdm5bQ80Y84 1544 aa21.3■■□□□ 1
Chfr-207ENSMUST00000198633 AqrQ8CFQ3 1481 aaKnown RBP21.3■■□□□ 1
Chfr-207ENSMUST00000198633 Naip1Q9QWK5 1403 aa21.29■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 83.1 ms