RNA–Protein interactions for RNA: ENSMUST00000197539.4

Ube2d3-210, Transcript of Ubiquitin-conjugating enzyme E2 D3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ube2d3, Length 2,515 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3-210ENSMUST00000197539 NischQ80TM9 1593 aa29.11■■■□□ 2.25
Ube2d3-210ENSMUST00000197539 Gm35339A0A140LHH9 1649 aa28.47■■■□□ 2.15
Ube2d3-210ENSMUST00000197539 Abcc9P70170 1546 aa28.23■■■□□ 2.11
Ube2d3-210ENSMUST00000197539 Abcc8B2RUS7 1588 aa27.63■■■□□ 2.01
Ube2d3-210ENSMUST00000197539 Rhox8Q6VSS7 320 aa27.19■■□□□ 1.94
Ube2d3-210ENSMUST00000197539 Rtl1Q7M732 1744 aa26.45■■□□□ 1.82
Ube2d3-210ENSMUST00000197539 Ccdc180J3QNE4 1664 aa26.06■■□□□ 1.76
Ube2d3-210ENSMUST00000197539 ScribQ80U72 1612 aa25.76■■□□□ 1.71
Ube2d3-210ENSMUST00000197539 Zcchc6Q5BLK4 1491 aaKnown RBP25.7■■□□□ 1.7
Ube2d3-210ENSMUST00000197539 Dcaf1Q80TR8 1506 aa25.65■■□□□ 1.7
Ube2d3-210ENSMUST00000197539 Rb1cc1Q9ESK9 1588 aa25.51■■□□□ 1.67
Ube2d3-210ENSMUST00000197539 Kdm5dQ62240 1548 aa25.31■■□□□ 1.64
Ube2d3-210ENSMUST00000197539 Ccdc136Q3TVA9 1136 aa25.24■■□□□ 1.63
Ube2d3-210ENSMUST00000197539 Baz1aO88379 1555 aa25.18■■□□□ 1.62
Ube2d3-210ENSMUST00000197539 NacadQ5SWP3 1504 aa25.05■■□□□ 1.6
Ube2d3-210ENSMUST00000197539 HrcG5E8J6 738 aa24.91■■□□□ 1.58
Ube2d3-210ENSMUST00000197539 Ehmt2Q9Z148 1263 aaKnown RBP24.62■■□□□ 1.53
Ube2d3-210ENSMUST00000197539 Smarca2Q6DIC0 1577 aa24.61■■□□□ 1.53
Ube2d3-210ENSMUST00000197539 Crybg2B7ZCC2 1516 aa24.61■■□□□ 1.53
Ube2d3-210ENSMUST00000197539 Rpgrip1Q9EPQ2 1331 aa24.59■■□□□ 1.53
Ube2d3-210ENSMUST00000197539 Trim41Q5NCC3 630 aa24.58■■□□□ 1.53
Ube2d3-210ENSMUST00000197539 Sycp2Q9CUU3 1500 aa24.52■■□□□ 1.52
Ube2d3-210ENSMUST00000197539 Acin1Q9JIX8 1338 aaKnown RBP24.42■■□□□ 1.5
Ube2d3-210ENSMUST00000197539 Cep164Q5DU05 1446 aa24.18■■□□□ 1.46
Ube2d3-210ENSMUST00000197539 Cecr2E9Q2Z1 1453 aa24.14■■□□□ 1.46
Ube2d3-210ENSMUST00000197539 Cngb1E1AZ71 1325 aa24.12■■□□□ 1.45
Ube2d3-210ENSMUST00000197539 Brd4Q9ESU6 1400 aaKnown RBP24.04■■□□□ 1.44
Ube2d3-210ENSMUST00000197539 Chic1Q8CBW7 227 aa24.02■■□□□ 1.44
Ube2d3-210ENSMUST00000197539 BicraF8VPZ9 1578 aa24■■□□□ 1.43
Ube2d3-210ENSMUST00000197539 Rsf1E9PWW9 1441 aaKnown RBP23.98■■□□□ 1.43
Ube2d3-210ENSMUST00000197539 Synj1Q8CHC4 1574 aa23.9■■□□□ 1.42
Ube2d3-210ENSMUST00000197539 Gab3Q8BSM5 595 aa23.89■■□□□ 1.41
Ube2d3-210ENSMUST00000197539 Golga3P55937 1487 aa23.84■■□□□ 1.41
Ube2d3-210ENSMUST00000197539 Ccdc88bQ4QRL3 1481 aa23.83■■□□□ 1.4
Ube2d3-210ENSMUST00000197539 Esf1Q3V1V3 845 aaKnown RBP23.73■■□□□ 1.39
Ube2d3-210ENSMUST00000197539 CftrP26361 1476 aa23.72■■□□□ 1.39
Ube2d3-210ENSMUST00000197539 Cttnbp2B9EJA2 1648 aa23.52■■□□□ 1.36
Ube2d3-210ENSMUST00000197539 Top2bQ64511 1612 aa23.51■■□□□ 1.35
Ube2d3-210ENSMUST00000197539 Smarca4Q3TKT4 1613 aaKnown RBP23.46■■□□□ 1.35
Ube2d3-210ENSMUST00000197539 Pcgf6Q99NA9 353 aa23.43■■□□□ 1.34
Ube2d3-210ENSMUST00000197539 Cc2d2aQ8CFW7 1633 aa23.36■■□□□ 1.33
Ube2d3-210ENSMUST00000197539 Mier1Q5UAK0 511 aa23.19■■□□□ 1.3
Ube2d3-210ENSMUST00000197539 Fmn1Q05860 1466 aa23.17■■□□□ 1.3
Ube2d3-210ENSMUST00000197539 Supt5hO55201 1082 aaKnown RBP23.16■■□□□ 1.3
Ube2d3-210ENSMUST00000197539 Iqgap2Q3UQ44 1575 aa23.16■■□□□ 1.3
Ube2d3-210ENSMUST00000197539 Rapgef2Q8CHG7 1496 aa23.12■■□□□ 1.29
Ube2d3-210ENSMUST00000197539 Top2aQ01320 1528 aaKnown RBP23.08■■□□□ 1.29
Ube2d3-210ENSMUST00000197539 Atad2bE9Q166 1460 aaKnown RBP23.01■■□□□ 1.27
Ube2d3-210ENSMUST00000197539 Zeb1Q64318 1117 aa23.01■■□□□ 1.27
Ube2d3-210ENSMUST00000197539 Myt1lP97500 1187 aa23■■□□□ 1.27
Ube2d3-210ENSMUST00000197539 NefmP08553 848 aa22.99■■□□□ 1.27
Ube2d3-210ENSMUST00000197539 Cep162Q6ZQ06 1403 aa22.96■■□□□ 1.27
Ube2d3-210ENSMUST00000197539 UbtfP25976 765 aaKnown RBP22.95■■□□□ 1.26
Ube2d3-210ENSMUST00000197539 Npm2Q80W85 207 aa22.9■■□□□ 1.26
Ube2d3-210ENSMUST00000197539 Pds5bQ4VA53 1446 aaKnown RBP22.87■■□□□ 1.25
Ube2d3-210ENSMUST00000197539 TnnQ80Z71 1560 aa22.74■■□□□ 1.23
Ube2d3-210ENSMUST00000197539 Frmpd1A2AKB4 1549 aa22.73■■□□□ 1.23
Ube2d3-210ENSMUST00000197539 Eif4g1Q6NZJ6 1600 aaKnown RBP22.67■■□□□ 1.22
Ube2d3-210ENSMUST00000197539 Wdr62Q3U3T8 1523 aa22.67■■□□□ 1.22
Ube2d3-210ENSMUST00000197539 Clip1Q922J3 1391 aa22.66■■□□□ 1.22
Ube2d3-210ENSMUST00000197539 Il27Q8K3I6 234 aa22.64■■□□□ 1.22
Ube2d3-210ENSMUST00000197539 Plekhg3Q4VAC9 1341 aa22.63■■□□□ 1.21
Ube2d3-210ENSMUST00000197539 Sall2Q9QX96 1004 aa22.62■■□□□ 1.21
Ube2d3-210ENSMUST00000197539 PtprkP35822 1457 aa22.61■■□□□ 1.21
Ube2d3-210ENSMUST00000197539 Kif15Q6P9L6 1387 aa22.57■■□□□ 1.2
Ube2d3-210ENSMUST00000197539 Arhgap35Q91YM2 1499 aa22.57■■□□□ 1.2
Ube2d3-210ENSMUST00000197539 Lamc3Q9R0B6 1581 aa22.55■■□□□ 1.2
Ube2d3-210ENSMUST00000197539 Ercc6F8VPZ5 1481 aa22.51■■□□□ 1.19
Ube2d3-210ENSMUST00000197539 NrkQ9R0G8 1455 aa22.48■■□□□ 1.19
Ube2d3-210ENSMUST00000197539 Neurod1Q60867 357 aa22.45■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Las1lA2BE28 776 aaKnown RBP22.44■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Ap3b1Q9Z1T1 1105 aa22.43■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Unc13aQ4KUS2 1712 aa22.43■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Aebp2Q9Z248 504 aaKnown RBP22.42■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Camsap1A2AHC3 1581 aa22.4■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Wdr66E9Q743 1299 aa22.4■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Shroom4Q1W617 1475 aa22.4■■□□□ 1.18
Ube2d3-210ENSMUST00000197539 Arap1Q4LDD4 1452 aa22.38■■□□□ 1.17
Ube2d3-210ENSMUST00000197539 Eea1Q8BL66 1411 aa22.36■■□□□ 1.17
Ube2d3-210ENSMUST00000197539 Ncapd3Q6ZQK0 1506 aa22.35■■□□□ 1.17
Ube2d3-210ENSMUST00000197539 Setd5Q5XJV7 1441 aa22.31■■□□□ 1.16
Ube2d3-210ENSMUST00000197539 Grin2bQ01097 1482 aa22.28■■□□□ 1.16
Ube2d3-210ENSMUST00000197539 Ccdc18Q640L5 1455 aa22.28■■□□□ 1.16
Ube2d3-210ENSMUST00000197539 TonslQ6NZL6 1363 aa22.27■■□□□ 1.16
Ube2d3-210ENSMUST00000197539 Ppargc1bQ8VHJ7 1014 aa22.25■■□□□ 1.15
Ube2d3-210ENSMUST00000197539 Map3k1P53349 1493 aa22.25■■□□□ 1.15
Ube2d3-210ENSMUST00000197539 Arhgef5E9Q7D5 1581 aa22.25■■□□□ 1.15
Ube2d3-210ENSMUST00000197539 Baz1bQ9Z277 1479 aa22.19■■□□□ 1.14
Ube2d3-210ENSMUST00000197539 Mroh2bQ7M6Y6 1581 aa22.18■■□□□ 1.14
Ube2d3-210ENSMUST00000197539 Phldb1Q6PDH0 1371 aaKnown RBP22.17■■□□□ 1.14
Ube2d3-210ENSMUST00000197539 ClspnQ80YR7 1315 aa22.16■■□□□ 1.14
Ube2d3-210ENSMUST00000197539 Cux2P70298 1426 aa22.16■■□□□ 1.14
Ube2d3-210ENSMUST00000197539 Ubl4bQ9CQ84 188 aa22.14■■□□□ 1.13
Ube2d3-210ENSMUST00000197539 Npm1Q61937 292 aaKnown RBP22.1■■□□□ 1.13
Ube2d3-210ENSMUST00000197539 AqrQ8CFQ3 1481 aaKnown RBP22.09■■□□□ 1.13
Ube2d3-210ENSMUST00000197539 Tiam1Q60610 1591 aa22.09■■□□□ 1.13
Ube2d3-210ENSMUST00000197539 Ankrd26Q811D2 1581 aa22.09■■□□□ 1.13
Ube2d3-210ENSMUST00000197539 Eid3Q3V124 375 aa22.07■■□□□ 1.12
Ube2d3-210ENSMUST00000197539 Naip1Q9QWK5 1403 aa22.07■■□□□ 1.12
Ube2d3-210ENSMUST00000197539 Thoc2B1AZI6 1594 aaKnown RBP22.07■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 61.7 ms