RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Rhox8Q6VSS7 320 aa9.81□□□□□ -0.84
Pcdh9-202ENSMUST00000192221 NischQ80TM9 1593 aa9.69□□□□□ -0.86
Pcdh9-202ENSMUST00000192221 Cngb1E1AZ71 1325 aa9.59□□□□□ -0.87
Pcdh9-202ENSMUST00000192221 Pelp1Q9DBD5 1123 aaKnown RBP9.5□□□□□ -0.89
Pcdh9-202ENSMUST00000192221 Las1lA2BE28 776 aaKnown RBP9.43□□□□□ -0.9
Pcdh9-202ENSMUST00000192221 Rpgrip1Q9EPQ2 1331 aa9.43□□□□□ -0.9
Pcdh9-202ENSMUST00000192221 4930567H17RikQ3V0K5 233 aa9.23□□□□□ -0.93
Pcdh9-202ENSMUST00000192221 Abcc9P70170 1546 aa9.18□□□□□ -0.94
Pcdh9-202ENSMUST00000192221 Wdr66E9Q743 1299 aa9.13□□□□□ -0.95
Pcdh9-202ENSMUST00000192221 Amer1Q7TS75 1132 aa9.12□□□□□ -0.95
Pcdh9-202ENSMUST00000192221 Gm35339A0A140LHH9 1649 aa9.09□□□□□ -0.95
Pcdh9-202ENSMUST00000192221 Abcc8B2RUS7 1588 aa9.03□□□□□ -0.96
Pcdh9-202ENSMUST00000192221 Trim41Q5NCC3 630 aa8.95□□□□□ -0.98
Pcdh9-202ENSMUST00000192221 Esf1Q3V1V3 845 aaKnown RBP8.92□□□□□ -0.98
Pcdh9-202ENSMUST00000192221 Myt1Q8CFC2 1127 aa8.89□□□□□ -0.99
Pcdh9-202ENSMUST00000192221 CenpbP27790 599 aa8.79□□□□□ -1
Pcdh9-202ENSMUST00000192221 Rtl1Q7M732 1744 aa8.77□□□□□ -1.01
Pcdh9-202ENSMUST00000192221 Ccdc136Q3TVA9 1136 aa8.75□□□□□ -1.01
Pcdh9-202ENSMUST00000192221 Zcchc6Q5BLK4 1491 aaKnown RBP8.67□□□□□ -1.02
Pcdh9-202ENSMUST00000192221 NacadQ5SWP3 1504 aa8.67□□□□□ -1.02
Pcdh9-202ENSMUST00000192221 Ccdc180J3QNE4 1664 aa8.6□□□□□ -1.03
Pcdh9-202ENSMUST00000192221 Zeb1Q64318 1117 aa8.59□□□□□ -1.03
Pcdh9-202ENSMUST00000192221 Npm2Q80W85 207 aa8.57□□□□□ -1.04
Pcdh9-202ENSMUST00000192221 Dcaf1Q80TR8 1506 aa8.56□□□□□ -1.04
Pcdh9-202ENSMUST00000192221 Rb1cc1Q9ESK9 1588 aa8.5□□□□□ -1.05
Pcdh9-202ENSMUST00000192221 Ythdc1E9Q5K9 736 aaKnown RBP8.49□□□□□ -1.05
Pcdh9-202ENSMUST00000192221 4933416C03RikQ3V063 378 aa8.46□□□□□ -1.06
Pcdh9-202ENSMUST00000192221 Brd4Q9ESU6 1400 aaKnown RBP8.46□□□□□ -1.06
Pcdh9-202ENSMUST00000192221 Stra8P70278 393 aa8.46□□□□□ -1.06
Pcdh9-202ENSMUST00000192221 HrcG5E8J6 738 aa8.43□□□□□ -1.06
Pcdh9-202ENSMUST00000192221 Baz1aO88379 1555 aa8.39□□□□□ -1.07
Pcdh9-202ENSMUST00000192221 Rtl5Q5DTT4 599 aa8.38□□□□□ -1.07
Pcdh9-202ENSMUST00000192221 Npm1Q61937 292 aaKnown RBP8.37□□□□□ -1.07
Pcdh9-202ENSMUST00000192221 Ercc6F8VPZ5 1481 aa8.37□□□□□ -1.07
Pcdh9-202ENSMUST00000192221 Kdm5dQ62240 1548 aa8.37□□□□□ -1.07
Pcdh9-202ENSMUST00000192221 DiexfQ8BTT6 772 aaKnown RBP8.35□□□□□ -1.07
Pcdh9-202ENSMUST00000192221 Gab3Q8BSM5 595 aa8.33□□□□□ -1.08
Pcdh9-202ENSMUST00000192221 Pds5bQ4VA53 1446 aaKnown RBP8.33□□□□□ -1.08
Pcdh9-202ENSMUST00000192221 Il27Q8K3I6 234 aa8.32□□□□□ -1.08
Pcdh9-202ENSMUST00000192221 Myt1lP97500 1187 aa8.3□□□□□ -1.08
Pcdh9-202ENSMUST00000192221 Ttbk1Q6PCN3 1308 aa8.3□□□□□ -1.08
Pcdh9-202ENSMUST00000192221 Crybg2B7ZCC2 1516 aa8.3□□□□□ -1.08
Pcdh9-202ENSMUST00000192221 Sycp2Q9CUU3 1500 aa8.27□□□□□ -1.09
Pcdh9-202ENSMUST00000192221 Ube2uB1AUC4 352 aa8.25□□□□□ -1.09
Pcdh9-202ENSMUST00000192221 Ubl4bQ9CQ84 188 aa8.24□□□□□ -1.09
Pcdh9-202ENSMUST00000192221 Rsf1E9PWW9 1441 aaKnown RBP8.18□□□□□ -1.1
Pcdh9-202ENSMUST00000192221 Tnnt3Q9QZ47 272 aa8.17□□□□□ -1.1
Pcdh9-202ENSMUST00000192221 ScribQ80U72 1612 aa8.13□□□□□ -1.11
Pcdh9-202ENSMUST00000192221 Ccdc18Q640L5 1455 aa8.11□□□□□ -1.11
Pcdh9-202ENSMUST00000192221 Cep164Q5DU05 1446 aa8.09□□□□□ -1.11
Pcdh9-202ENSMUST00000192221 Atad2bE9Q166 1460 aaKnown RBP8.09□□□□□ -1.11
Pcdh9-202ENSMUST00000192221 CatipB9EKE5 520 aa8.08□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 NeflP08551 543 aa8.08□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 Hdac5Q9Z2V6 1113 aa8.07□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 Smarca2Q6DIC0 1577 aa8.07□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 Kif15Q6P9L6 1387 aa8.05□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 Golga3P55937 1487 aa8.04□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 NefmP08553 848 aa8.04□□□□□ -1.12
Pcdh9-202ENSMUST00000192221 Phldb1Q6PDH0 1371 aaKnown RBP8.02□□□□□ -1.13
Pcdh9-202ENSMUST00000192221 Ehmt2Q9Z148 1263 aaKnown RBP8.01□□□□□ -1.13
Pcdh9-202ENSMUST00000192221 Anp32bQ9EST5 272 aaKnown RBP8.01□□□□□ -1.13
Pcdh9-202ENSMUST00000192221 NclP09405 707 aaKnown RBP8.01□□□□□ -1.13
Pcdh9-202ENSMUST00000192221 Smarca4Q3TKT4 1613 aaKnown RBP8□□□□□ -1.13
Pcdh9-202ENSMUST00000192221 Cdk11bP24788 784 aaKnown RBP7.99□□□□□ -1.13
Pcdh9-202ENSMUST00000192221 Ccdc9Q8VC31 543 aaKnown RBP7.96□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 UbtfP25976 765 aaKnown RBP7.95□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 DaxxO35613 739 aa7.92□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 Baz1bQ9Z277 1479 aa7.92□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 NrdcQ8BHG1 1161 aa7.92□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 Fmn1Q05860 1466 aa7.91□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 Ap3b1Q9Z1T1 1105 aa7.9□□□□□ -1.14
Pcdh9-202ENSMUST00000192221 Cttnbp2B9EJA2 1648 aa7.9□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Slc24a1Q91WD8 1130 aa7.89□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 CftrP26361 1476 aa7.89□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Polr3glQ8R0C0 218 aa7.87□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Iqgap2Q3UQ44 1575 aa7.87□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Fam50aQ9WV03 339 aaKnown RBP7.86□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Ccer2J3QPU5 274 aa7.85□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Clip1Q922J3 1391 aa7.84□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Upf2A2AT37 1269 aaKnown RBP7.84□□□□□ -1.15
Pcdh9-202ENSMUST00000192221 Clstn2Q9ER65 966 aa7.83□□□□□ -1.16
Pcdh9-202ENSMUST00000192221 Cux2P70298 1426 aa7.83□□□□□ -1.16
Pcdh9-202ENSMUST00000192221 Gm13697A2AK42 830 aa7.82□□□□□ -1.16
Pcdh9-202ENSMUST00000192221 Acin1Q9JIX8 1338 aaKnown RBP7.81□□□□□ -1.16
Pcdh9-202ENSMUST00000192221 Anp32aO35381 247 aa7.8□□□□□ -1.16
Pcdh9-202ENSMUST00000192221 Os9Q8K2C7 672 aa7.79□□□□□ -1.16
Pcdh9-202ENSMUST00000192221 Nop58Q6DFW4 536 aaKnown RBP7.77□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Chic1Q8CBW7 227 aa7.77□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Synj1Q8CHC4 1574 aa7.77□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Cecr2E9Q2Z1 1453 aa7.77□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Lmod3E9QA62 571 aa7.77□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Lmod2Q3UHZ5 550 aa7.75□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Ifnlr1Q8CGK5 535 aa7.75□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Setd5Q5XJV7 1441 aa7.75□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Rangap1P46061 589 aaKnown RBP7.75□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Eea1Q8BL66 1411 aa7.75□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Arhgap27A2AB59 869 aa7.73□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Fkbp15Q6P9Q6 1216 aaKnown RBP7.72□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 Rpap1Q80TE0 1409 aa7.72□□□□□ -1.17
Pcdh9-202ENSMUST00000192221 LrpprcQ6PB66 1392 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms