RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Rpgrip1Q9EPQ2 1331 aa17■□□□□ 0.31
Col6a5-203ENSMUST00000190193 Rhox8Q6VSS7 320 aa16.94■□□□□ 0.3
Col6a5-203ENSMUST00000190193 Las1lA2BE28 776 aaKnown RBP16.41■□□□□ 0.22
Col6a5-203ENSMUST00000190193 Rtl1Q7M732 1744 aa16.4■□□□□ 0.22
Col6a5-203ENSMUST00000190193 Cngb1E1AZ71 1325 aa16.39■□□□□ 0.21
Col6a5-203ENSMUST00000190193 Pelp1Q9DBD5 1123 aaKnown RBP16.03■□□□□ 0.16
Col6a5-203ENSMUST00000190193 Ccdc180J3QNE4 1664 aa15.85■□□□□ 0.13
Col6a5-203ENSMUST00000190193 Ehmt2Q9Z148 1263 aaKnown RBP15.5■□□□□ 0.07
Col6a5-203ENSMUST00000190193 Wdr66E9Q743 1299 aa15.44■□□□□ 0.06
Col6a5-203ENSMUST00000190193 CenpbP27790 599 aa15.4■□□□□ 0.06
Col6a5-203ENSMUST00000190193 Myt1Q8CFC2 1127 aa15.35■□□□□ 0.05
Col6a5-203ENSMUST00000190193 Zeb1Q64318 1117 aa15.32■□□□□ 0.04
Col6a5-203ENSMUST00000190193 NischQ80TM9 1593 aa15.29■□□□□ 0.04
Col6a5-203ENSMUST00000190193 Acin1Q9JIX8 1338 aaKnown RBP15.26■□□□□ 0.03
Col6a5-203ENSMUST00000190193 Stra8P70278 393 aa15.2■□□□□ 0.02
Col6a5-203ENSMUST00000190193 Amer1Q7TS75 1132 aa15.19■□□□□ 0.02
Col6a5-203ENSMUST00000190193 NefmP08553 848 aa15.08■□□□□ 0
Col6a5-203ENSMUST00000190193 Ube2uB1AUC4 352 aa14.96□□□□□ -0.02
Col6a5-203ENSMUST00000190193 Ccdc136Q3TVA9 1136 aa14.95□□□□□ -0.02
Col6a5-203ENSMUST00000190193 Trim41Q5NCC3 630 aa14.94□□□□□ -0.02
Col6a5-203ENSMUST00000190193 Esf1Q3V1V3 845 aaKnown RBP14.89□□□□□ -0.03
Col6a5-203ENSMUST00000190193 4930567H17RikQ3V0K5 233 aa14.84□□□□□ -0.03
Col6a5-203ENSMUST00000190193 Tnnt3Q9QZ47 272 aa14.77□□□□□ -0.05
Col6a5-203ENSMUST00000190193 Npm2Q80W85 207 aa14.73□□□□□ -0.05
Col6a5-203ENSMUST00000190193 Cdk11bP24788 784 aaKnown RBP14.71□□□□□ -0.05
Col6a5-203ENSMUST00000190193 Rtl5Q5DTT4 599 aa14.7□□□□□ -0.06
Col6a5-203ENSMUST00000190193 Gab3Q8BSM5 595 aa14.69□□□□□ -0.06
Col6a5-203ENSMUST00000190193 Pcgf6Q99NA9 353 aa14.67□□□□□ -0.06
Col6a5-203ENSMUST00000190193 Ttbk1Q6PCN3 1308 aa14.64□□□□□ -0.07
Col6a5-203ENSMUST00000190193 4933416C03RikQ3V063 378 aa14.55□□□□□ -0.08
Col6a5-203ENSMUST00000190193 Myt1lP97500 1187 aa14.54□□□□□ -0.08
Col6a5-203ENSMUST00000190193 HrcG5E8J6 738 aa14.52□□□□□ -0.08
Col6a5-203ENSMUST00000190193 NeflP08551 543 aa14.52□□□□□ -0.09
Col6a5-203ENSMUST00000190193 UbtfP25976 765 aaKnown RBP14.48□□□□□ -0.09
Col6a5-203ENSMUST00000190193 Nop58Q6DFW4 536 aaKnown RBP14.47□□□□□ -0.09
Col6a5-203ENSMUST00000190193 Slc24a1Q91WD8 1130 aa14.45□□□□□ -0.1
Col6a5-203ENSMUST00000190193 DiexfQ8BTT6 772 aaKnown RBP14.42□□□□□ -0.1
Col6a5-203ENSMUST00000190193 Anp32bQ9EST5 272 aaKnown RBP14.38□□□□□ -0.11
Col6a5-203ENSMUST00000190193 NrdcQ8BHG1 1161 aa14.38□□□□□ -0.11
Col6a5-203ENSMUST00000190193 Supt5hO55201 1082 aaKnown RBP14.23□□□□□ -0.13
Col6a5-203ENSMUST00000190193 NclP09405 707 aaKnown RBP14.21□□□□□ -0.13
Col6a5-203ENSMUST00000190193 TonslQ6NZL6 1363 aa14.21□□□□□ -0.13
Col6a5-203ENSMUST00000190193 Abcc9P70170 1546 aa14.19□□□□□ -0.14
Col6a5-203ENSMUST00000190193 Anp32aO35381 247 aa14.18□□□□□ -0.14
Col6a5-203ENSMUST00000190193 Neurod1Q60867 357 aa14.14□□□□□ -0.15
Col6a5-203ENSMUST00000190193 ClspnQ80YR7 1315 aa14.12□□□□□ -0.15
Col6a5-203ENSMUST00000190193 Eif5bQ05D44 1216 aaKnown RBP14.09□□□□□ -0.15
Col6a5-203ENSMUST00000190193 Dcaf1Q80TR8 1506 aa14.08□□□□□ -0.16
Col6a5-203ENSMUST00000190193 Fam50aQ9WV03 339 aaKnown RBP13.99□□□□□ -0.17
Col6a5-203ENSMUST00000190193 Zcchc6Q5BLK4 1491 aaKnown RBP13.98□□□□□ -0.17
Col6a5-203ENSMUST00000190193 DaxxO35613 739 aa13.96□□□□□ -0.17
Col6a5-203ENSMUST00000190193 Ccdc9Q8VC31 543 aaKnown RBP13.95□□□□□ -0.18
Col6a5-203ENSMUST00000190193 Anks4bQ8K3X6 423 aa13.94□□□□□ -0.18
Col6a5-203ENSMUST00000190193 Aplp2Q06335 707 aa13.94□□□□□ -0.18
Col6a5-203ENSMUST00000190193 Mier1Q5UAK0 511 aa13.9□□□□□ -0.18
Col6a5-203ENSMUST00000190193 Gm35339A0A140LHH9 1649 aa13.9□□□□□ -0.18
Col6a5-203ENSMUST00000190193 Ythdc1E9Q5K9 736 aaKnown RBP13.82□□□□□ -0.2
Col6a5-203ENSMUST00000190193 Os9Q8K2C7 672 aa13.77□□□□□ -0.2
Col6a5-203ENSMUST00000190193 Csrnp3P59055 597 aa13.76□□□□□ -0.21
Col6a5-203ENSMUST00000190193 Ppargc1bQ8VHJ7 1014 aa13.74□□□□□ -0.21
Col6a5-203ENSMUST00000190193 Rb1cc1Q9ESK9 1588 aa13.73□□□□□ -0.21
Col6a5-203ENSMUST00000190193 Cep164Q5DU05 1446 aa13.72□□□□□ -0.21
Col6a5-203ENSMUST00000190193 Ap3b1Q9Z1T1 1105 aa13.69□□□□□ -0.22
Col6a5-203ENSMUST00000190193 Hsp90aa1P07901 733 aaKnown RBP13.64□□□□□ -0.23
Col6a5-203ENSMUST00000190193 Il27Q8K3I6 234 aa13.64□□□□□ -0.23
Col6a5-203ENSMUST00000190193 Upf2A2AT37 1269 aaKnown RBP13.64□□□□□ -0.23
Col6a5-203ENSMUST00000190193 Calr4Q3TQS0 420 aa13.62□□□□□ -0.23
Col6a5-203ENSMUST00000190193 Abcc8B2RUS7 1588 aa13.61□□□□□ -0.23
Col6a5-203ENSMUST00000190193 Hdac5Q9Z2V6 1113 aa13.6□□□□□ -0.23
Col6a5-203ENSMUST00000190193 Brd4Q9ESU6 1400 aaKnown RBP13.58□□□□□ -0.24
Col6a5-203ENSMUST00000190193 CatipB9EKE5 520 aa13.56□□□□□ -0.24
Col6a5-203ENSMUST00000190193 Nlrp6Q91WS2 869 aa13.54□□□□□ -0.24
Col6a5-203ENSMUST00000190193 Wdr43Q6ZQL4 677 aaKnown RBP13.53□□□□□ -0.24
Col6a5-203ENSMUST00000190193 Ppp4r2Q0VGB7 417 aa13.51□□□□□ -0.25
Col6a5-203ENSMUST00000190193 Ccer2J3QPU5 274 aa13.5□□□□□ -0.25
Col6a5-203ENSMUST00000190193 Sall2Q9QX96 1004 aa13.49□□□□□ -0.25
Col6a5-203ENSMUST00000190193 Plekhg3Q4VAC9 1341 aa13.46□□□□□ -0.26
Col6a5-203ENSMUST00000190193 Trim44Q9QXA7 346 aa13.46□□□□□ -0.26
Col6a5-203ENSMUST00000190193 Gm38655A0A286YDK6 273 aa13.44□□□□□ -0.26
Col6a5-203ENSMUST00000190193 Ccdc27Q3V036 639 aa13.43□□□□□ -0.26
Col6a5-203ENSMUST00000190193 Clip1Q922J3 1391 aa13.4□□□□□ -0.26
Col6a5-203ENSMUST00000190193 ArxO35085 564 aa13.37□□□□□ -0.27
Col6a5-203ENSMUST00000190193 1700123L14RikQ3V2K7 440 aa13.36□□□□□ -0.27
Col6a5-203ENSMUST00000190193 Htatsf1Q8BGC0 757 aa13.35□□□□□ -0.27
Col6a5-203ENSMUST00000190193 Polr3glQ8R0C0 218 aa13.35□□□□□ -0.27
Col6a5-203ENSMUST00000190193 DekQ7TNV0 380 aaKnown RBP13.34□□□□□ -0.27
Col6a5-203ENSMUST00000190193 Bcl11aQ9QYE3 773 aa13.33□□□□□ -0.28
Col6a5-203ENSMUST00000190193 Fam71e1A1L3C1 212 aa13.32□□□□□ -0.28
Col6a5-203ENSMUST00000190193 Adam1bQ8R534 806 aa13.31□□□□□ -0.28
Col6a5-203ENSMUST00000190193 Lmod3E9QA62 571 aa13.3□□□□□ -0.28
Col6a5-203ENSMUST00000190193 CanxP35564 591 aaKnown RBP13.26□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Mapk8ip2Q9ERE9 830 aa13.26□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Hsp90ab1P11499 724 aaKnown RBP13.26□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Eid3Q3V124 375 aa13.25□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Irx3P81067 507 aa13.25□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Hnrnpul2Q00PI9 745 aaKnown RBP13.25□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Baz1aO88379 1555 aa13.24□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Lmod2Q3UHZ5 550 aa13.24□□□□□ -0.29
Col6a5-203ENSMUST00000190193 Ppm1gQ61074 542 aa13.19□□□□□ -0.3
Col6a5-203ENSMUST00000190193 Trim30dE9PWL0 497 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 127.9 ms