RNA–Protein interactions for RNA: ENSMUST00000189428.1

Gm28509-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28509, Length 2,170 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28509-201ENSMUST00000189428 NischQ80TM9 1593 aa14.87□□□□□ -0.03
Gm28509-201ENSMUST00000189428 Gm35339A0A140LHH9 1649 aa14.77□□□□□ -0.04
Gm28509-201ENSMUST00000189428 Abcc9P70170 1546 aa14.4□□□□□ -0.1
Gm28509-201ENSMUST00000189428 Abcc8B2RUS7 1588 aa14.24□□□□□ -0.13
Gm28509-201ENSMUST00000189428 ScribQ80U72 1612 aa13.46□□□□□ -0.25
Gm28509-201ENSMUST00000189428 Rhox8Q6VSS7 320 aa13.43□□□□□ -0.26
Gm28509-201ENSMUST00000189428 Dcaf1Q80TR8 1506 aa13.18□□□□□ -0.3
Gm28509-201ENSMUST00000189428 Rpgrip1Q9EPQ2 1331 aa13.15□□□□□ -0.3
Gm28509-201ENSMUST00000189428 Kdm5dQ62240 1548 aa13.14□□□□□ -0.31
Gm28509-201ENSMUST00000189428 NacadQ5SWP3 1504 aa13.11□□□□□ -0.31
Gm28509-201ENSMUST00000189428 Chic1Q8CBW7 227 aa13.05□□□□□ -0.32
Gm28509-201ENSMUST00000189428 Ube2uB1AUC4 352 aa13.04□□□□□ -0.32
Gm28509-201ENSMUST00000189428 Rb1cc1Q9ESK9 1588 aa13□□□□□ -0.33
Gm28509-201ENSMUST00000189428 Myt1Q8CFC2 1127 aa13□□□□□ -0.33
Gm28509-201ENSMUST00000189428 DiexfQ8BTT6 772 aaKnown RBP12.9□□□□□ -0.34
Gm28509-201ENSMUST00000189428 Sycp2Q9CUU3 1500 aa12.83□□□□□ -0.36
Gm28509-201ENSMUST00000189428 Baz1aO88379 1555 aa12.82□□□□□ -0.36
Gm28509-201ENSMUST00000189428 Pcgf6Q99NA9 353 aa12.82□□□□□ -0.36
Gm28509-201ENSMUST00000189428 Ccdc180J3QNE4 1664 aa12.78□□□□□ -0.36
Gm28509-201ENSMUST00000189428 Rtl1Q7M732 1744 aa12.71□□□□□ -0.38
Gm28509-201ENSMUST00000189428 Crybg2B7ZCC2 1516 aa12.67□□□□□ -0.38
Gm28509-201ENSMUST00000189428 Zcchc6Q5BLK4 1491 aaKnown RBP12.65□□□□□ -0.38
Gm28509-201ENSMUST00000189428 CenpbP27790 599 aa12.61□□□□□ -0.39
Gm28509-201ENSMUST00000189428 BicraF8VPZ9 1578 aa12.58□□□□□ -0.4
Gm28509-201ENSMUST00000189428 Ccdc136Q3TVA9 1136 aa12.51□□□□□ -0.41
Gm28509-201ENSMUST00000189428 Smarca2Q6DIC0 1577 aa12.49□□□□□ -0.41
Gm28509-201ENSMUST00000189428 Las1lA2BE28 776 aaKnown RBP12.48□□□□□ -0.41
Gm28509-201ENSMUST00000189428 Amer1Q7TS75 1132 aa12.48□□□□□ -0.41
Gm28509-201ENSMUST00000189428 Plppr3Q7TPB0 716 aa12.46□□□□□ -0.41
Gm28509-201ENSMUST00000189428 Bcl11aQ9QYE3 773 aa12.45□□□□□ -0.42
Gm28509-201ENSMUST00000189428 Mapk8ip2Q9ERE9 830 aa12.44□□□□□ -0.42
Gm28509-201ENSMUST00000189428 Kcna4Q61423 654 aa12.35□□□□□ -0.43
Gm28509-201ENSMUST00000189428 Cecr2E9Q2Z1 1453 aa12.34□□□□□ -0.43
Gm28509-201ENSMUST00000189428 CatipB9EKE5 520 aa12.31□□□□□ -0.44
Gm28509-201ENSMUST00000189428 Trim41Q5NCC3 630 aa12.26□□□□□ -0.45
Gm28509-201ENSMUST00000189428 Brd4Q9ESU6 1400 aaKnown RBP12.21□□□□□ -0.45
Gm28509-201ENSMUST00000189428 Smarca4Q3TKT4 1613 aaKnown RBP12.18□□□□□ -0.46
Gm28509-201ENSMUST00000189428 Pds5bQ4VA53 1446 aaKnown RBP12.16□□□□□ -0.46
Gm28509-201ENSMUST00000189428 Synj1Q8CHC4 1574 aa12.13□□□□□ -0.47
Gm28509-201ENSMUST00000189428 Atad2bE9Q166 1460 aaKnown RBP12.13□□□□□ -0.47
Gm28509-201ENSMUST00000189428 Acin1Q9JIX8 1338 aaKnown RBP12.11□□□□□ -0.47
Gm28509-201ENSMUST00000189428 CftrP26361 1476 aa12.11□□□□□ -0.47
Gm28509-201ENSMUST00000189428 Iqgap2Q3UQ44 1575 aa12.07□□□□□ -0.48
Gm28509-201ENSMUST00000189428 PrkcshO08795 521 aa12.06□□□□□ -0.48
Gm28509-201ENSMUST00000189428 Esf1Q3V1V3 845 aaKnown RBP12.05□□□□□ -0.48
Gm28509-201ENSMUST00000189428 Cttnbp2B9EJA2 1648 aa12.05□□□□□ -0.48
Gm28509-201ENSMUST00000189428 1700123L14RikQ3V2K7 440 aa12.04□□□□□ -0.48
Gm28509-201ENSMUST00000189428 Phf23Q8BSN5 401 aa12□□□□□ -0.49
Gm28509-201ENSMUST00000189428 Cngb1E1AZ71 1325 aa12□□□□□ -0.49
Gm28509-201ENSMUST00000189428 Neurod1Q60867 357 aa11.99□□□□□ -0.49
Gm28509-201ENSMUST00000189428 HrcG5E8J6 738 aa11.95□□□□□ -0.5
Gm28509-201ENSMUST00000189428 Golga3P55937 1487 aa11.93□□□□□ -0.5
Gm28509-201ENSMUST00000189428 Ercc6F8VPZ5 1481 aa11.92□□□□□ -0.5
Gm28509-201ENSMUST00000189428 Ppargc1bQ8VHJ7 1014 aa11.9□□□□□ -0.5
Gm28509-201ENSMUST00000189428 Frmpd1A2AKB4 1549 aa11.89□□□□□ -0.51
Gm28509-201ENSMUST00000189428 Wdr62Q3U3T8 1523 aa11.89□□□□□ -0.51
Gm28509-201ENSMUST00000189428 Thoc2B1AZI6 1594 aaKnown RBP11.85□□□□□ -0.51
Gm28509-201ENSMUST00000189428 Ttbk1Q6PCN3 1308 aa11.82□□□□□ -0.52
Gm28509-201ENSMUST00000189428 Top2bQ64511 1612 aa11.81□□□□□ -0.52
Gm28509-201ENSMUST00000189428 Ehmt2Q9Z148 1263 aaKnown RBP11.8□□□□□ -0.52
Gm28509-201ENSMUST00000189428 Aplp2Q06335 707 aa11.79□□□□□ -0.52
Gm28509-201ENSMUST00000189428 Rsf1E9PWW9 1441 aaKnown RBP11.78□□□□□ -0.52
Gm28509-201ENSMUST00000189428 Ccdc88bQ4QRL3 1481 aa11.76□□□□□ -0.53
Gm28509-201ENSMUST00000189428 Gab3Q8BSM5 595 aa11.75□□□□□ -0.53
Gm28509-201ENSMUST00000189428 Phldb1Q6PDH0 1371 aaKnown RBP11.75□□□□□ -0.53
Gm28509-201ENSMUST00000189428 Cc2d2aQ8CFW7 1633 aa11.73□□□□□ -0.53
Gm28509-201ENSMUST00000189428 Dnajc5bQ9CQ94 199 aa11.73□□□□□ -0.53
Gm28509-201ENSMUST00000189428 Cep164Q5DU05 1446 aa11.72□□□□□ -0.53
Gm28509-201ENSMUST00000189428 Unc13aQ4KUS2 1712 aa11.7□□□□□ -0.54
Gm28509-201ENSMUST00000189428 Fmn1Q05860 1466 aa11.7□□□□□ -0.54
Gm28509-201ENSMUST00000189428 Ubl4bQ9CQ84 188 aa11.69□□□□□ -0.54
Gm28509-201ENSMUST00000189428 Pknox2Q8BG99 474 aa11.68□□□□□ -0.54
Gm28509-201ENSMUST00000189428 Anks4bQ8K3X6 423 aa11.68□□□□□ -0.54
Gm28509-201ENSMUST00000189428 Kif15Q6P9L6 1387 aa11.67□□□□□ -0.54
Gm28509-201ENSMUST00000189428 Fam135aQ6NS59 1506 aa11.67□□□□□ -0.54
Gm28509-201ENSMUST00000189428 NrdcQ8BHG1 1161 aa11.62□□□□□ -0.55
Gm28509-201ENSMUST00000189428 Lamc3Q9R0B6 1581 aa11.62□□□□□ -0.55
Gm28509-201ENSMUST00000189428 Fgd1P52734 960 aa11.62□□□□□ -0.55
Gm28509-201ENSMUST00000189428 TnnQ80Z71 1560 aa11.6□□□□□ -0.55
Gm28509-201ENSMUST00000189428 Gtf3c5Q8R2T8 520 aa11.59□□□□□ -0.55
Gm28509-201ENSMUST00000189428 Csrnp3P59055 597 aa11.58□□□□□ -0.56
Gm28509-201ENSMUST00000189428 Il27Q8K3I6 234 aa11.58□□□□□ -0.56
Gm28509-201ENSMUST00000189428 BccipQ9CWI3 316 aa11.58□□□□□ -0.56
Gm28509-201ENSMUST00000189428 Supt5hO55201 1082 aaKnown RBP11.57□□□□□ -0.56
Gm28509-201ENSMUST00000189428 Cux2P70298 1426 aa11.55□□□□□ -0.56
Gm28509-201ENSMUST00000189428 Top2aQ01320 1528 aaKnown RBP11.55□□□□□ -0.56
Gm28509-201ENSMUST00000189428 Npm1Q61937 292 aaKnown RBP11.51□□□□□ -0.57
Gm28509-201ENSMUST00000189428 Ccdc18Q640L5 1455 aa11.5□□□□□ -0.57
Gm28509-201ENSMUST00000189428 Camsap1A2AHC3 1581 aa11.48□□□□□ -0.57
Gm28509-201ENSMUST00000189428 Baz1bQ9Z277 1479 aa11.48□□□□□ -0.57
Gm28509-201ENSMUST00000189428 Mrc2Q64449 1479 aa11.45□□□□□ -0.58
Gm28509-201ENSMUST00000189428 Ifnlr1Q8CGK5 535 aa11.45□□□□□ -0.58
Gm28509-201ENSMUST00000189428 Npm2Q80W85 207 aa11.43□□□□□ -0.58
Gm28509-201ENSMUST00000189428 Cdk11bP24788 784 aaKnown RBP11.43□□□□□ -0.58
Gm28509-201ENSMUST00000189428 Senp3Q9EP97 568 aaKnown RBP11.41□□□□□ -0.58
Gm28509-201ENSMUST00000189428 Rapgef2Q8CHG7 1496 aa11.4□□□□□ -0.58
Gm28509-201ENSMUST00000189428 LrpprcQ6PB66 1392 aaKnown RBP11.38□□□□□ -0.59
Gm28509-201ENSMUST00000189428 Grin2bQ01097 1482 aa11.38□□□□□ -0.59
Gm28509-201ENSMUST00000189428 Hdac5Q9Z2V6 1113 aa11.37□□□□□ -0.59
Gm28509-201ENSMUST00000189428 PtprkP35822 1457 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms