RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mousemouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-208ENSMUST00000186940 Gm35339A0A140LHH9 1649 aa49.38■■■■■ 5.5
Fn1-208ENSMUST00000186940 NischQ80TM9 1593 aa48.75■■■■■ 5.39
Fn1-208ENSMUST00000186940 Abcc8B2RUS7 1588 aa47.19■■■■■ 5.14
Fn1-208ENSMUST00000186940 Abcc9P70170 1546 aa47.12■■■■■ 5.13
Fn1-208ENSMUST00000186940 ScribQ80U72 1612 aa45.56■■■■■ 4.88
Fn1-208ENSMUST00000186940 NacadQ5SWP3 1504 aa44.21■■■■■ 4.67
Fn1-208ENSMUST00000186940 Kdm5dQ62240 1548 aa44.06■■■■■ 4.64
Fn1-208ENSMUST00000186940 Dcaf1Q80TR8 1506 aa43.37■■■■■ 4.53
Fn1-208ENSMUST00000186940 Sycp2Q9CUU3 1500 aa43.33■■■■■ 4.53
Fn1-208ENSMUST00000186940 BicraF8VPZ9 1578 aa42.71■■■■■ 4.43
Fn1-208ENSMUST00000186940 Rb1cc1Q9ESK9 1588 aa42.44■■■■■ 4.38
Fn1-208ENSMUST00000186940 Rhox8Q6VSS7 320 aa42.05■■■■■ 4.32
Fn1-208ENSMUST00000186940 Dnajc5bQ9CQ94 199 aa41.93■■■■■ 4.3
Fn1-208ENSMUST00000186940 Baz1aO88379 1555 aa41.85■■■■■ 4.29
Fn1-208ENSMUST00000186940 Crybg2B7ZCC2 1516 aa41.77■■■■■ 4.28
Fn1-208ENSMUST00000186940 Ccdc180J3QNE4 1664 aa41.72■■■■■ 4.27
Fn1-208ENSMUST00000186940 Pds5bQ4VA53 1446 aaKnown RBP41.69■■■■■ 4.26
Fn1-208ENSMUST00000186940 Zcchc6Q5BLK4 1491 aaKnown RBP41.34■■■■■ 4.21
Fn1-208ENSMUST00000186940 Thoc2B1AZI6 1594 aaKnown RBP41.29■■■■■ 4.2
Fn1-208ENSMUST00000186940 Atad2bE9Q166 1460 aaKnown RBP41.22■■■■■ 4.19
Fn1-208ENSMUST00000186940 Ercc6F8VPZ5 1481 aa40.78■■■■■ 4.12
Fn1-208ENSMUST00000186940 Smarca4Q3TKT4 1613 aaKnown RBP40.74■■■■■ 4.11
Fn1-208ENSMUST00000186940 Smarca2Q6DIC0 1577 aa40.69■■■■■ 4.1
Fn1-208ENSMUST00000186940 Cc2d2aQ8CFW7 1633 aa40.65■■■■■ 4.1
Fn1-208ENSMUST00000186940 Cecr2E9Q2Z1 1453 aa40.58■■■■■ 4.09
Fn1-208ENSMUST00000186940 Iqgap2Q3UQ44 1575 aa40.55■■■■■ 4.08
Fn1-208ENSMUST00000186940 Fam135aQ6NS59 1506 aa40.35■■■■■ 4.05
Fn1-208ENSMUST00000186940 Wdr62Q3U3T8 1523 aa40.24■■■■■ 4.03
Fn1-208ENSMUST00000186940 Frmpd1A2AKB4 1549 aa40.21■■■■■ 4.03
Fn1-208ENSMUST00000186940 Phldb1Q6PDH0 1371 aaKnown RBP40.12■■■■■ 4.01
Fn1-208ENSMUST00000186940 Baz1bQ9Z277 1479 aa39.96■■■■□ 3.99
Fn1-208ENSMUST00000186940 Ubl4bQ9CQ84 188 aa39.8■■■■□ 3.96
Fn1-208ENSMUST00000186940 CftrP26361 1476 aa39.65■■■■□ 3.94
Fn1-208ENSMUST00000186940 Rtl1Q7M732 1744 aa39.64■■■■□ 3.94
Fn1-208ENSMUST00000186940 Cttnbp2B9EJA2 1648 aa39.55■■■■□ 3.92
Fn1-208ENSMUST00000186940 Brd4Q9ESU6 1400 aaKnown RBP39.54■■■■□ 3.92
Fn1-208ENSMUST00000186940 Unc13aQ4KUS2 1712 aa39.48■■■■□ 3.91
Fn1-208ENSMUST00000186940 Synj1Q8CHC4 1574 aa39.48■■■■□ 3.91
Fn1-208ENSMUST00000186940 Mrc2Q64449 1479 aa39.46■■■■□ 3.91
Fn1-208ENSMUST00000186940 Ccdc136Q3TVA9 1136 aa39.38■■■■□ 3.89
Fn1-208ENSMUST00000186940 Esf1Q3V1V3 845 aaKnown RBP39.06■■■■□ 3.84
Fn1-208ENSMUST00000186940 Rsf1E9PWW9 1441 aaKnown RBP38.84■■■■□ 3.81
Fn1-208ENSMUST00000186940 Trim41Q5NCC3 630 aa38.82■■■■□ 3.8
Fn1-208ENSMUST00000186940 Cux2P70298 1426 aa38.79■■■■□ 3.8
Fn1-208ENSMUST00000186940 Kif15Q6P9L6 1387 aa38.78■■■■□ 3.8
Fn1-208ENSMUST00000186940 Lrriq1Q0P5X1 1673 aa38.52■■■■□ 3.76
Fn1-208ENSMUST00000186940 Lamc3Q9R0B6 1581 aa38.51■■■■□ 3.76
Fn1-208ENSMUST00000186940 Npm1Q61937 292 aaKnown RBP38.44■■■■□ 3.74
Fn1-208ENSMUST00000186940 Kif21aQ9QXL2 1672 aa38.4■■■■□ 3.74
Fn1-208ENSMUST00000186940 Cep164Q5DU05 1446 aa38.25■■■■□ 3.71
Fn1-208ENSMUST00000186940 Dnajc5P60904 198 aa38.22■■■■□ 3.71
Fn1-208ENSMUST00000186940 Golga3P55937 1487 aa38.03■■■■□ 3.68
Fn1-208ENSMUST00000186940 Ccdc18Q640L5 1455 aa38.03■■■■□ 3.68
Fn1-208ENSMUST00000186940 Eif4g3Q80XI3 1579 aaKnown RBP38■■■■□ 3.67
Fn1-208ENSMUST00000186940 Il27Q8K3I6 234 aa37.99■■■■□ 3.67
Fn1-208ENSMUST00000186940 Dhx29Q6PGC1 1365 aaKnown RBP37.96■■■■□ 3.67
Fn1-208ENSMUST00000186940 TnnQ80Z71 1560 aa37.96■■■■□ 3.67
Fn1-208ENSMUST00000186940 Cngb1E1AZ71 1325 aa37.94■■■■□ 3.66
Fn1-208ENSMUST00000186940 Top2bQ64511 1612 aa37.92■■■■□ 3.66
Fn1-208ENSMUST00000186940 Urb2E9Q7L1 1524 aaKnown RBP37.88■■■■□ 3.65
Fn1-208ENSMUST00000186940 LrpprcQ6PB66 1392 aaKnown RBP37.88■■■■□ 3.65
Fn1-208ENSMUST00000186940 Plb1Q3TTY0 1478 aa37.84■■■■□ 3.65
Fn1-208ENSMUST00000186940 Camsap1A2AHC3 1581 aa37.78■■■■□ 3.64
Fn1-208ENSMUST00000186940 Shroom2A2ALU4 1481 aa37.72■■■■□ 3.63
Fn1-208ENSMUST00000186940 Crocc2F6XLV1 1638 aa37.69■■■■□ 3.62
Fn1-208ENSMUST00000186940 Fmn1Q05860 1466 aa37.65■■■■□ 3.62
Fn1-208ENSMUST00000186940 PogzQ8BZH4 1409 aaKnown RBP37.6■■■■□ 3.61
Fn1-208ENSMUST00000186940 Ift140E9PY46 1464 aa37.52■■■■□ 3.6
Fn1-208ENSMUST00000186940 Duox2A2AQ99 1517 aa37.41■■■■□ 3.58
Fn1-208ENSMUST00000186940 Pabpn1Q8CCS6 302 aaKnown RBP37.4■■■■□ 3.58
Fn1-208ENSMUST00000186940 Rusc2Q80U22 1514 aa37.36■■■■□ 3.57
Fn1-208ENSMUST00000186940 Grin2bQ01097 1482 aa37.29■■■■□ 3.56
Fn1-208ENSMUST00000186940 Col17a1Q07563 1470 aa37.22■■■■□ 3.55
Fn1-208ENSMUST00000186940 Disp1Q3TDN0 1521 aa37.2■■■■□ 3.55
Fn1-208ENSMUST00000186940 Pelp1Q9DBD5 1123 aaKnown RBP37.15■■■■□ 3.54
Fn1-208ENSMUST00000186940 Efcab5A0JP43 1406 aa37.13■■■■□ 3.53
Fn1-208ENSMUST00000186940 Cc2d2bA0A286YDU8 1405 aa37.04■■■■□ 3.52
Fn1-208ENSMUST00000186940 Nup160Q9Z0W3 1402 aaKnown RBP37.04■■■■□ 3.52
Fn1-208ENSMUST00000186940 Samd9lQ69Z37 1561 aa37.04■■■■□ 3.52
Fn1-208ENSMUST00000186940 Pbrm1Q8BSQ9 1634 aaKnown RBP36.97■■■■□ 3.51
Fn1-208ENSMUST00000186940 Ccdc88bQ4QRL3 1481 aa36.93■■■■□ 3.5
Fn1-208ENSMUST00000186940 Rad54l2Q99NG0 1466 aa36.85■■■■□ 3.49
Fn1-208ENSMUST00000186940 NrkQ9R0G8 1455 aa36.85■■■■□ 3.49
Fn1-208ENSMUST00000186940 Top2aQ01320 1528 aaKnown RBP36.82■■■■□ 3.49
Fn1-208ENSMUST00000186940 Setd1bQ8CFT2 1985 aa36.82■■■■□ 3.48
Fn1-208ENSMUST00000186940 Zcchc11B2RX14 1644 aaKnown RBP36.81■■■■□ 3.48
Fn1-208ENSMUST00000186940 Grin2aP35436 1464 aa36.78■■■■□ 3.48
Fn1-208ENSMUST00000186940 Magi3Q9EQJ9 1476 aa36.73■■■■□ 3.47
Fn1-208ENSMUST00000186940 AqrQ8CFQ3 1481 aaKnown RBP36.73■■■■□ 3.47
Fn1-208ENSMUST00000186940 Fgd6Q69ZL1 1399 aa36.69■■■■□ 3.46
Fn1-208ENSMUST00000186940 Chic1Q8CBW7 227 aa36.68■■■■□ 3.46
Fn1-208ENSMUST00000186940 Shroom4Q1W617 1475 aa36.64■■■■□ 3.46
Fn1-208ENSMUST00000186940 PtprkP35822 1457 aa36.59■■■■□ 3.45
Fn1-208ENSMUST00000186940 SynmQ70IV5 1561 aa36.5■■■■□ 3.43
Fn1-208ENSMUST00000186940 Pla2r1Q62028 1487 aa36.49■■■■□ 3.43
Fn1-208ENSMUST00000186940 Zeb1Q64318 1117 aa36.46■■■■□ 3.43
Fn1-208ENSMUST00000186940 Adgrl3Q80TS3 1537 aa36.45■■■■□ 3.43
Fn1-208ENSMUST00000186940 Gpatch8A2A6A1 1505 aa36.44■■■■□ 3.42
Fn1-208ENSMUST00000186940 Gapvd1Q6PAR5 1458 aa36.42■■■■□ 3.42
Fn1-208ENSMUST00000186940 AknaQ80VW7 1404 aa36.41■■■■□ 3.42
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms