RNA–Protein interactions for RNA: ENSMUST00000186560.1

Gm28100-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28100, Length 582 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28100-201ENSMUST00000186560 Gm35339A0A140LHH9 1649 aa19.88■□□□□ 0.77
Gm28100-201ENSMUST00000186560 Abcc9P70170 1546 aa19.8■□□□□ 0.76
Gm28100-201ENSMUST00000186560 NischQ80TM9 1593 aa19.6■□□□□ 0.73
Gm28100-201ENSMUST00000186560 Abcc8B2RUS7 1588 aa19.14■□□□□ 0.65
Gm28100-201ENSMUST00000186560 ScribQ80U72 1612 aa18.89■□□□□ 0.61
Gm28100-201ENSMUST00000186560 Dnajc5bQ9CQ94 199 aa18.85■□□□□ 0.61
Gm28100-201ENSMUST00000186560 NacadQ5SWP3 1504 aa18.14■□□□□ 0.49
Gm28100-201ENSMUST00000186560 Kdm5dQ62240 1548 aa18.11■□□□□ 0.49
Gm28100-201ENSMUST00000186560 Sycp2Q9CUU3 1500 aa17.86■□□□□ 0.45
Gm28100-201ENSMUST00000186560 BicraF8VPZ9 1578 aa17.81■□□□□ 0.44
Gm28100-201ENSMUST00000186560 Dnajc5P60904 198 aa17.51■□□□□ 0.39
Gm28100-201ENSMUST00000186560 Thoc2B1AZI6 1594 aaKnown RBP17.41■□□□□ 0.38
Gm28100-201ENSMUST00000186560 Trim41Q5NCC3 630 aa17.36■□□□□ 0.37
Gm28100-201ENSMUST00000186560 Pds5bQ4VA53 1446 aaKnown RBP17.35■□□□□ 0.37
Gm28100-201ENSMUST00000186560 Dcaf1Q80TR8 1506 aa17.26■□□□□ 0.35
Gm28100-201ENSMUST00000186560 Cc2d2aQ8CFW7 1633 aa17.26■□□□□ 0.35
Gm28100-201ENSMUST00000186560 Atad2bE9Q166 1460 aaKnown RBP17.05■□□□□ 0.32
Gm28100-201ENSMUST00000186560 Rb1cc1Q9ESK9 1588 aa16.99■□□□□ 0.31
Gm28100-201ENSMUST00000186560 Ercc6F8VPZ5 1481 aa16.95■□□□□ 0.3
Gm28100-201ENSMUST00000186560 Ubl4bQ9CQ84 188 aa16.9■□□□□ 0.3
Gm28100-201ENSMUST00000186560 Fam135aQ6NS59 1506 aa16.85■□□□□ 0.29
Gm28100-201ENSMUST00000186560 Smarca2Q6DIC0 1577 aa16.8■□□□□ 0.28
Gm28100-201ENSMUST00000186560 Zcchc6Q5BLK4 1491 aaKnown RBP16.78■□□□□ 0.28
Gm28100-201ENSMUST00000186560 Phldb1Q6PDH0 1371 aaKnown RBP16.73■□□□□ 0.27
Gm28100-201ENSMUST00000186560 Frmpd1A2AKB4 1549 aa16.7■□□□□ 0.26
Gm28100-201ENSMUST00000186560 Rhox8Q6VSS7 320 aa16.68■□□□□ 0.26
Gm28100-201ENSMUST00000186560 Iqgap2Q3UQ44 1575 aa16.65■□□□□ 0.26
Gm28100-201ENSMUST00000186560 Cecr2E9Q2Z1 1453 aa16.64■□□□□ 0.25
Gm28100-201ENSMUST00000186560 Baz1aO88379 1555 aa16.64■□□□□ 0.25
Gm28100-201ENSMUST00000186560 Smarca4Q3TKT4 1613 aaKnown RBP16.59■□□□□ 0.25
Gm28100-201ENSMUST00000186560 Wdr62Q3U3T8 1523 aa16.59■□□□□ 0.25
Gm28100-201ENSMUST00000186560 Crybg2B7ZCC2 1516 aa16.55■□□□□ 0.24
Gm28100-201ENSMUST00000186560 Mrc2Q64449 1479 aa16.55■□□□□ 0.24
Gm28100-201ENSMUST00000186560 Unc13aQ4KUS2 1712 aa16.36■□□□□ 0.21
Gm28100-201ENSMUST00000186560 Baz1bQ9Z277 1479 aa16.27■□□□□ 0.19
Gm28100-201ENSMUST00000186560 Lrriq1Q0P5X1 1673 aa16.27■□□□□ 0.19
Gm28100-201ENSMUST00000186560 Col17a1Q07563 1470 aa16.24■□□□□ 0.19
Gm28100-201ENSMUST00000186560 Pcdh10E9PXQ7 1057 aa16.22■□□□□ 0.19
Gm28100-201ENSMUST00000186560 Ccdc180J3QNE4 1664 aa16.19■□□□□ 0.18
Gm28100-201ENSMUST00000186560 Rsf1E9PWW9 1441 aaKnown RBP16.18■□□□□ 0.18
Gm28100-201ENSMUST00000186560 Pabpn1Q8CCS6 302 aaKnown RBP16.16■□□□□ 0.18
Gm28100-201ENSMUST00000186560 Pelp1Q9DBD5 1123 aaKnown RBP16.13■□□□□ 0.17
Gm28100-201ENSMUST00000186560 Shroom2A2ALU4 1481 aa16.13■□□□□ 0.17
Gm28100-201ENSMUST00000186560 Cux2P70298 1426 aa16.08■□□□□ 0.16
Gm28100-201ENSMUST00000186560 Kif21aQ9QXL2 1672 aa16.02■□□□□ 0.15
Gm28100-201ENSMUST00000186560 Npm1Q61937 292 aaKnown RBP15.97■□□□□ 0.15
Gm28100-201ENSMUST00000186560 Kif15Q6P9L6 1387 aa15.96■□□□□ 0.15
Gm28100-201ENSMUST00000186560 CftrP26361 1476 aa15.93■□□□□ 0.14
Gm28100-201ENSMUST00000186560 Eif4g3Q80XI3 1579 aaKnown RBP15.92■□□□□ 0.14
Gm28100-201ENSMUST00000186560 Esf1Q3V1V3 845 aaKnown RBP15.91■□□□□ 0.14
Gm28100-201ENSMUST00000186560 Synj1Q8CHC4 1574 aa15.88■□□□□ 0.13
Gm28100-201ENSMUST00000186560 Top2bQ64511 1612 aa15.86■□□□□ 0.13
Gm28100-201ENSMUST00000186560 Il27Q8K3I6 234 aa15.85■□□□□ 0.13
Gm28100-201ENSMUST00000186560 Urb2E9Q7L1 1524 aaKnown RBP15.84■□□□□ 0.13
Gm28100-201ENSMUST00000186560 Ccdc136Q3TVA9 1136 aa15.84■□□□□ 0.13
Gm28100-201ENSMUST00000186560 Ttbk1Q6PCN3 1308 aa15.83■□□□□ 0.12
Gm28100-201ENSMUST00000186560 Plb1Q3TTY0 1478 aa15.8■□□□□ 0.12
Gm28100-201ENSMUST00000186560 Cttnbp2B9EJA2 1648 aa15.77■□□□□ 0.12
Gm28100-201ENSMUST00000186560 Dhx29Q6PGC1 1365 aaKnown RBP15.68■□□□□ 0.1
Gm28100-201ENSMUST00000186560 Cep164Q5DU05 1446 aa15.65■□□□□ 0.1
Gm28100-201ENSMUST00000186560 Gm156Q58A37 223 aa15.61■□□□□ 0.09
Gm28100-201ENSMUST00000186560 Brd4Q9ESU6 1400 aaKnown RBP15.6■□□□□ 0.09
Gm28100-201ENSMUST00000186560 Arhgef5E9Q7D5 1581 aa15.6■□□□□ 0.09
Gm28100-201ENSMUST00000186560 Zcchc11B2RX14 1644 aaKnown RBP15.59■□□□□ 0.09
Gm28100-201ENSMUST00000186560 Adgrl3Q80TS3 1537 aa15.58■□□□□ 0.08
Gm28100-201ENSMUST00000186560 Lamc3Q9R0B6 1581 aa15.54■□□□□ 0.08
Gm28100-201ENSMUST00000186560 LrpprcQ6PB66 1392 aaKnown RBP15.49■□□□□ 0.07
Gm28100-201ENSMUST00000186560 PtprkP35822 1457 aa15.48■□□□□ 0.07
Gm28100-201ENSMUST00000186560 PtprtQ99M80 1454 aa15.48■□□□□ 0.07
Gm28100-201ENSMUST00000186560 Rusc2Q80U22 1514 aa15.48■□□□□ 0.07
Gm28100-201ENSMUST00000186560 Crocc2F6XLV1 1638 aa15.43■□□□□ 0.06
Gm28100-201ENSMUST00000186560 Plekhg3Q4VAC9 1341 aa15.43■□□□□ 0.06
Gm28100-201ENSMUST00000186560 Ift140E9PY46 1464 aa15.4■□□□□ 0.06
Gm28100-201ENSMUST00000186560 Gapvd1Q6PAR5 1458 aa15.37■□□□□ 0.05
Gm28100-201ENSMUST00000186560 Cep170Q6A065 1588 aa15.36■□□□□ 0.05
Gm28100-201ENSMUST00000186560 Disp1Q3TDN0 1521 aa15.36■□□□□ 0.05
Gm28100-201ENSMUST00000186560 Ppp1r18Q8BQ30 594 aa15.34■□□□□ 0.05
Gm28100-201ENSMUST00000186560 Ccdc18Q640L5 1455 aa15.33■□□□□ 0.05
Gm28100-201ENSMUST00000186560 Plppr3Q7TPB0 716 aa15.33■□□□□ 0.04
Gm28100-201ENSMUST00000186560 Ifnlr1Q8CGK5 535 aa15.31■□□□□ 0.04
Gm28100-201ENSMUST00000186560 PogzQ8BZH4 1409 aaKnown RBP15.28■□□□□ 0.04
Gm28100-201ENSMUST00000186560 Duox2A2AQ99 1517 aa15.25■□□□□ 0.03
Gm28100-201ENSMUST00000186560 Pprc1Q6NZN1 1644 aa15.25■□□□□ 0.03
Gm28100-201ENSMUST00000186560 Setd1bQ8CFT2 1985 aa15.24■□□□□ 0.03
Gm28100-201ENSMUST00000186560 Ythdc2B2RR83 1445 aaKnown RBP15.24■□□□□ 0.03
Gm28100-201ENSMUST00000186560 AknaQ80VW7 1404 aa15.23■□□□□ 0.03
Gm28100-201ENSMUST00000186560 Fgd6Q69ZL1 1399 aa15.23■□□□□ 0.03
Gm28100-201ENSMUST00000186560 Cngb1E1AZ71 1325 aa15.2■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Camsap1A2AHC3 1581 aa15.2■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Rad54l2Q99NG0 1466 aa15.2■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Cc2d2bA0A286YDU8 1405 aa15.17■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Nup160Q9Z0W3 1402 aaKnown RBP15.17■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Rapgef2Q8CHG7 1496 aa15.17■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Golga3P55937 1487 aa15.15■□□□□ 0.02
Gm28100-201ENSMUST00000186560 Abcc1O35379 1528 aa15.12■□□□□ 0.01
Gm28100-201ENSMUST00000186560 Dnajc5gQ8C632 165 aa15.12■□□□□ 0.01
Gm28100-201ENSMUST00000186560 TnnQ80Z71 1560 aa15.08■□□□□ 0
Gm28100-201ENSMUST00000186560 Samd9lQ69Z37 1561 aa15.07■□□□□ 0
Gm28100-201ENSMUST00000186560 Arhgap27A2AB59 869 aa15.06■□□□□ 0
Gm28100-201ENSMUST00000186560 Cyb5rlB1AS42 316 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms