RNA–Protein interactions for RNA: ENSMUST00000166236.8

Ccr9-203, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 5,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-203ENSMUST00000166236 NischQ80TM9 1593 aa11.22□□□□□ -0.61
Ccr9-203ENSMUST00000166236 Rhox8Q6VSS7 320 aa11.07□□□□□ -0.64
Ccr9-203ENSMUST00000166236 Abcc9P70170 1546 aa10.73□□□□□ -0.69
Ccr9-203ENSMUST00000166236 Gm35339A0A140LHH9 1649 aa10.68□□□□□ -0.7
Ccr9-203ENSMUST00000166236 Abcc8B2RUS7 1588 aa10.51□□□□□ -0.73
Ccr9-203ENSMUST00000166236 Rtl1Q7M732 1744 aa10.26□□□□□ -0.77
Ccr9-203ENSMUST00000166236 Ccdc180J3QNE4 1664 aa10.07□□□□□ -0.8
Ccr9-203ENSMUST00000166236 Trim41Q5NCC3 630 aa10.05□□□□□ -0.8
Ccr9-203ENSMUST00000166236 Ccdc136Q3TVA9 1136 aa10.01□□□□□ -0.81
Ccr9-203ENSMUST00000166236 Dcaf1Q80TR8 1506 aa9.89□□□□□ -0.83
Ccr9-203ENSMUST00000166236 Esf1Q3V1V3 845 aaKnown RBP9.89□□□□□ -0.83
Ccr9-203ENSMUST00000166236 NacadQ5SWP3 1504 aa9.86□□□□□ -0.83
Ccr9-203ENSMUST00000166236 Zcchc6Q5BLK4 1491 aaKnown RBP9.86□□□□□ -0.83
Ccr9-203ENSMUST00000166236 Rb1cc1Q9ESK9 1588 aa9.85□□□□□ -0.83
Ccr9-203ENSMUST00000166236 Cngb1E1AZ71 1325 aa9.82□□□□□ -0.84
Ccr9-203ENSMUST00000166236 Rpgrip1Q9EPQ2 1331 aa9.81□□□□□ -0.84
Ccr9-203ENSMUST00000166236 HrcG5E8J6 738 aa9.75□□□□□ -0.85
Ccr9-203ENSMUST00000166236 Baz1aO88379 1555 aa9.72□□□□□ -0.85
Ccr9-203ENSMUST00000166236 Kdm5dQ62240 1548 aa9.69□□□□□ -0.86
Ccr9-203ENSMUST00000166236 Brd4Q9ESU6 1400 aaKnown RBP9.6□□□□□ -0.87
Ccr9-203ENSMUST00000166236 ScribQ80U72 1612 aa9.59□□□□□ -0.87
Ccr9-203ENSMUST00000166236 Crybg2B7ZCC2 1516 aa9.55□□□□□ -0.88
Ccr9-203ENSMUST00000166236 Npm2Q80W85 207 aa9.53□□□□□ -0.88
Ccr9-203ENSMUST00000166236 Gab3Q8BSM5 595 aa9.52□□□□□ -0.89
Ccr9-203ENSMUST00000166236 Sycp2Q9CUU3 1500 aa9.49□□□□□ -0.89
Ccr9-203ENSMUST00000166236 Zeb1Q64318 1117 aa9.46□□□□□ -0.89
Ccr9-203ENSMUST00000166236 Ehmt2Q9Z148 1263 aaKnown RBP9.39□□□□□ -0.91
Ccr9-203ENSMUST00000166236 Myt1lP97500 1187 aa9.36□□□□□ -0.91
Ccr9-203ENSMUST00000166236 Cep164Q5DU05 1446 aa9.34□□□□□ -0.91
Ccr9-203ENSMUST00000166236 Smarca2Q6DIC0 1577 aa9.32□□□□□ -0.92
Ccr9-203ENSMUST00000166236 Acin1Q9JIX8 1338 aaKnown RBP9.3□□□□□ -0.92
Ccr9-203ENSMUST00000166236 Pds5bQ4VA53 1446 aaKnown RBP9.29□□□□□ -0.92
Ccr9-203ENSMUST00000166236 Il27Q8K3I6 234 aa9.29□□□□□ -0.92
Ccr9-203ENSMUST00000166236 Golga3P55937 1487 aa9.28□□□□□ -0.92
Ccr9-203ENSMUST00000166236 Ercc6F8VPZ5 1481 aa9.27□□□□□ -0.93
Ccr9-203ENSMUST00000166236 Las1lA2BE28 776 aaKnown RBP9.25□□□□□ -0.93
Ccr9-203ENSMUST00000166236 Npm1Q61937 292 aaKnown RBP9.23□□□□□ -0.93
Ccr9-203ENSMUST00000166236 NefmP08553 848 aa9.23□□□□□ -0.93
Ccr9-203ENSMUST00000166236 Rsf1E9PWW9 1441 aaKnown RBP9.17□□□□□ -0.94
Ccr9-203ENSMUST00000166236 Smarca4Q3TKT4 1613 aaKnown RBP9.16□□□□□ -0.94
Ccr9-203ENSMUST00000166236 Atad2bE9Q166 1460 aaKnown RBP9.15□□□□□ -0.95
Ccr9-203ENSMUST00000166236 CftrP26361 1476 aa9.14□□□□□ -0.95
Ccr9-203ENSMUST00000166236 UbtfP25976 765 aaKnown RBP9.13□□□□□ -0.95
Ccr9-203ENSMUST00000166236 Chic1Q8CBW7 227 aa9.12□□□□□ -0.95
Ccr9-203ENSMUST00000166236 Ubl4bQ9CQ84 188 aa9.12□□□□□ -0.95
Ccr9-203ENSMUST00000166236 Cttnbp2B9EJA2 1648 aa9.12□□□□□ -0.95
Ccr9-203ENSMUST00000166236 Ube2uB1AUC4 352 aa9.11□□□□□ -0.95
Ccr9-203ENSMUST00000166236 Cecr2E9Q2Z1 1453 aa9.1□□□□□ -0.95
Ccr9-203ENSMUST00000166236 Fmn1Q05860 1466 aa9.09□□□□□ -0.96
Ccr9-203ENSMUST00000166236 Ccdc18Q640L5 1455 aa9.08□□□□□ -0.96
Ccr9-203ENSMUST00000166236 Synj1Q8CHC4 1574 aa9.08□□□□□ -0.96
Ccr9-203ENSMUST00000166236 Kif15Q6P9L6 1387 aa9.07□□□□□ -0.96
Ccr9-203ENSMUST00000166236 Wdr66E9Q743 1299 aa9.04□□□□□ -0.96
Ccr9-203ENSMUST00000166236 Iqgap2Q3UQ44 1575 aa9.02□□□□□ -0.97
Ccr9-203ENSMUST00000166236 BicraF8VPZ9 1578 aa9□□□□□ -0.97
Ccr9-203ENSMUST00000166236 Clip1Q922J3 1391 aa8.99□□□□□ -0.97
Ccr9-203ENSMUST00000166236 Ap3b1Q9Z1T1 1105 aa8.98□□□□□ -0.97
Ccr9-203ENSMUST00000166236 Phldb1Q6PDH0 1371 aaKnown RBP8.97□□□□□ -0.97
Ccr9-203ENSMUST00000166236 Ccdc88bQ4QRL3 1481 aa8.94□□□□□ -0.98
Ccr9-203ENSMUST00000166236 Fam50aQ9WV03 339 aaKnown RBP8.9□□□□□ -0.99
Ccr9-203ENSMUST00000166236 Mier1Q5UAK0 511 aa8.89□□□□□ -0.99
Ccr9-203ENSMUST00000166236 NclP09405 707 aaKnown RBP8.87□□□□□ -0.99
Ccr9-203ENSMUST00000166236 Plekhg3Q4VAC9 1341 aa8.87□□□□□ -0.99
Ccr9-203ENSMUST00000166236 Eea1Q8BL66 1411 aa8.87□□□□□ -0.99
Ccr9-203ENSMUST00000166236 Setd5Q5XJV7 1441 aa8.86□□□□□ -0.99
Ccr9-203ENSMUST00000166236 Cep162Q6ZQ06 1403 aa8.85□□□□□ -0.99
Ccr9-203ENSMUST00000166236 Cux2P70298 1426 aa8.84□□□□□ -0.99
Ccr9-203ENSMUST00000166236 TonslQ6NZL6 1363 aa8.83□□□□□ -1
Ccr9-203ENSMUST00000166236 Ccer2J3QPU5 274 aa8.83□□□□□ -1
Ccr9-203ENSMUST00000166236 Stra8P70278 393 aa8.82□□□□□ -1
Ccr9-203ENSMUST00000166236 Lmod2Q3UHZ5 550 aa8.81□□□□□ -1
Ccr9-203ENSMUST00000166236 Top2bQ64511 1612 aa8.81□□□□□ -1
Ccr9-203ENSMUST00000166236 Rapgef2Q8CHG7 1496 aa8.79□□□□□ -1
Ccr9-203ENSMUST00000166236 Cc2d2aQ8CFW7 1633 aa8.79□□□□□ -1
Ccr9-203ENSMUST00000166236 Wdr62Q3U3T8 1523 aa8.79□□□□□ -1
Ccr9-203ENSMUST00000166236 Top2aQ01320 1528 aaKnown RBP8.79□□□□□ -1
Ccr9-203ENSMUST00000166236 Frmpd1A2AKB4 1549 aa8.78□□□□□ -1
Ccr9-203ENSMUST00000166236 BlmO88700 1416 aa8.78□□□□□ -1
Ccr9-203ENSMUST00000166236 Cdk11bP24788 784 aaKnown RBP8.78□□□□□ -1
Ccr9-203ENSMUST00000166236 LrpprcQ6PB66 1392 aaKnown RBP8.75□□□□□ -1.01
Ccr9-203ENSMUST00000166236 Hdac5Q9Z2V6 1113 aa8.75□□□□□ -1.01
Ccr9-203ENSMUST00000166236 Baz1bQ9Z277 1479 aa8.75□□□□□ -1.01
Ccr9-203ENSMUST00000166236 Ttbk1Q6PCN3 1308 aa8.75□□□□□ -1.01
Ccr9-203ENSMUST00000166236 Carmil1Q6EDY6 1374 aa8.73□□□□□ -1.01
Ccr9-203ENSMUST00000166236 NrkQ9R0G8 1455 aa8.71□□□□□ -1.01
Ccr9-203ENSMUST00000166236 Rpap1Q80TE0 1409 aa8.71□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Shroom4Q1W617 1475 aa8.7□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Efcab5A0JP43 1406 aa8.7□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Lamc3Q9R0B6 1581 aa8.7□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Pcgf6Q99NA9 353 aa8.69□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Dhx29Q6PGC1 1365 aaKnown RBP8.68□□□□□ -1.02
Ccr9-203ENSMUST00000166236 CntlnA2AM05 1397 aa8.68□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Map3k1P53349 1493 aa8.66□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Polr1aO35134 1717 aaKnown RBP8.66□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Mia2Q91ZV0 1396 aa8.65□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Anp32bQ9EST5 272 aaKnown RBP8.65□□□□□ -1.02
Ccr9-203ENSMUST00000166236 ClspnQ80YR7 1315 aa8.65□□□□□ -1.02
Ccr9-203ENSMUST00000166236 Fyco1Q8VDC1 1437 aa8.65□□□□□ -1.03
Ccr9-203ENSMUST00000166236 Mrc2Q64449 1479 aa8.65□□□□□ -1.03
Ccr9-203ENSMUST00000166236 Clstn2Q9ER65 966 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms