RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 NischQ80TM9 1593 aa54.95■■■■■ 6.39
Ldb1-207ENSMUST00000156585 Gm35339A0A140LHH9 1649 aa54.51■■■■■ 6.32
Ldb1-207ENSMUST00000156585 Abcc9P70170 1546 aa53.38■■■■■ 6.14
Ldb1-207ENSMUST00000156585 Abcc8B2RUS7 1588 aa52.4■■■■■ 5.98
Ldb1-207ENSMUST00000156585 Rhox8Q6VSS7 320 aa49.98■■■■■ 5.59
Ldb1-207ENSMUST00000156585 ScribQ80U72 1612 aa49.13■■■■■ 5.46
Ldb1-207ENSMUST00000156585 Rtl1Q7M732 1744 aa49.06■■■■■ 5.44
Ldb1-207ENSMUST00000156585 Dcaf1Q80TR8 1506 aa48.92■■■■■ 5.42
Ldb1-207ENSMUST00000156585 Kdm5dQ62240 1548 aa48.1■■■■■ 5.29
Ldb1-207ENSMUST00000156585 Rb1cc1Q9ESK9 1588 aa48.1■■■■■ 5.29
Ldb1-207ENSMUST00000156585 Ccdc180J3QNE4 1664 aa47.92■■■■■ 5.26
Ldb1-207ENSMUST00000156585 NacadQ5SWP3 1504 aa47.89■■■■■ 5.26
Ldb1-207ENSMUST00000156585 Baz1aO88379 1555 aa47.57■■■■■ 5.21
Ldb1-207ENSMUST00000156585 Zcchc6Q5BLK4 1491 aaKnown RBP47.32■■■■■ 5.17
Ldb1-207ENSMUST00000156585 Crybg2B7ZCC2 1516 aa46.97■■■■■ 5.11
Ldb1-207ENSMUST00000156585 Sycp2Q9CUU3 1500 aa46.85■■■■■ 5.09
Ldb1-207ENSMUST00000156585 Smarca2Q6DIC0 1577 aa46.42■■■■■ 5.02
Ldb1-207ENSMUST00000156585 Ccdc136Q3TVA9 1136 aa46.39■■■■■ 5.02
Ldb1-207ENSMUST00000156585 BicraF8VPZ9 1578 aa45.81■■■■■ 4.92
Ldb1-207ENSMUST00000156585 HrcG5E8J6 738 aa45.74■■■■■ 4.91
Ldb1-207ENSMUST00000156585 Trim41Q5NCC3 630 aa45.73■■■■■ 4.91
Ldb1-207ENSMUST00000156585 Cecr2E9Q2Z1 1453 aa45.35■■■■■ 4.85
Ldb1-207ENSMUST00000156585 Brd4Q9ESU6 1400 aaKnown RBP45.29■■■■■ 4.84
Ldb1-207ENSMUST00000156585 Synj1Q8CHC4 1574 aa44.9■■■■■ 4.78
Ldb1-207ENSMUST00000156585 CftrP26361 1476 aa44.73■■■■■ 4.75
Ldb1-207ENSMUST00000156585 Smarca4Q3TKT4 1613 aaKnown RBP44.69■■■■■ 4.75
Ldb1-207ENSMUST00000156585 Cep164Q5DU05 1446 aa44.6■■■■■ 4.73
Ldb1-207ENSMUST00000156585 Cttnbp2B9EJA2 1648 aa44.59■■■■■ 4.73
Ldb1-207ENSMUST00000156585 Golga3P55937 1487 aa44.56■■■■■ 4.72
Ldb1-207ENSMUST00000156585 Cngb1E1AZ71 1325 aa44.48■■■■■ 4.71
Ldb1-207ENSMUST00000156585 Esf1Q3V1V3 845 aaKnown RBP44.24■■■■■ 4.67
Ldb1-207ENSMUST00000156585 Rsf1E9PWW9 1441 aaKnown RBP44.22■■■■■ 4.67
Ldb1-207ENSMUST00000156585 Top2bQ64511 1612 aa44.18■■■■■ 4.66
Ldb1-207ENSMUST00000156585 Iqgap2Q3UQ44 1575 aa44.12■■■■■ 4.65
Ldb1-207ENSMUST00000156585 Atad2bE9Q166 1460 aaKnown RBP44.11■■■■■ 4.65
Ldb1-207ENSMUST00000156585 Chic1Q8CBW7 227 aa44.07■■■■■ 4.65
Ldb1-207ENSMUST00000156585 Pds5bQ4VA53 1446 aaKnown RBP44.03■■■■■ 4.64
Ldb1-207ENSMUST00000156585 Ccdc88bQ4QRL3 1481 aa44.02■■■■■ 4.64
Ldb1-207ENSMUST00000156585 Rpgrip1Q9EPQ2 1331 aa43.68■■■■■ 4.58
Ldb1-207ENSMUST00000156585 Cc2d2aQ8CFW7 1633 aa43.67■■■■■ 4.58
Ldb1-207ENSMUST00000156585 Fmn1Q05860 1466 aa43.56■■■■■ 4.56
Ldb1-207ENSMUST00000156585 Gab3Q8BSM5 595 aa43.49■■■■■ 4.55
Ldb1-207ENSMUST00000156585 Ehmt2Q9Z148 1263 aaKnown RBP43.46■■■■■ 4.55
Ldb1-207ENSMUST00000156585 Acin1Q9JIX8 1338 aaKnown RBP43.37■■■■■ 4.53
Ldb1-207ENSMUST00000156585 Wdr62Q3U3T8 1523 aa43.35■■■■■ 4.53
Ldb1-207ENSMUST00000156585 Frmpd1A2AKB4 1549 aa43.32■■■■■ 4.53
Ldb1-207ENSMUST00000156585 Top2aQ01320 1528 aaKnown RBP43.22■■■■■ 4.51
Ldb1-207ENSMUST00000156585 Ercc6F8VPZ5 1481 aa43.19■■■■■ 4.5
Ldb1-207ENSMUST00000156585 TnnQ80Z71 1560 aa43.06■■■■■ 4.48
Ldb1-207ENSMUST00000156585 Rapgef2Q8CHG7 1496 aa42.94■■■■■ 4.46
Ldb1-207ENSMUST00000156585 Lamc3Q9R0B6 1581 aa42.85■■■■■ 4.45
Ldb1-207ENSMUST00000156585 Unc13aQ4KUS2 1712 aa42.84■■■■■ 4.45
Ldb1-207ENSMUST00000156585 Thoc2B1AZI6 1594 aaKnown RBP42.73■■■■■ 4.43
Ldb1-207ENSMUST00000156585 Kif15Q6P9L6 1387 aa42.61■■■■■ 4.41
Ldb1-207ENSMUST00000156585 Cep162Q6ZQ06 1403 aa42.57■■■■■ 4.4
Ldb1-207ENSMUST00000156585 Phldb1Q6PDH0 1371 aaKnown RBP42.52■■■■■ 4.4
Ldb1-207ENSMUST00000156585 Camsap1A2AHC3 1581 aa42.37■■■■■ 4.37
Ldb1-207ENSMUST00000156585 Npm2Q80W85 207 aa42.37■■■■■ 4.37
Ldb1-207ENSMUST00000156585 Eif4g1Q6NZJ6 1600 aaKnown RBP42.35■■■■■ 4.37
Ldb1-207ENSMUST00000156585 Fam135aQ6NS59 1506 aa42.25■■■■■ 4.35
Ldb1-207ENSMUST00000156585 Ccdc18Q640L5 1455 aa42.25■■■■■ 4.35
Ldb1-207ENSMUST00000156585 NrkQ9R0G8 1455 aa42.19■■■■■ 4.34
Ldb1-207ENSMUST00000156585 Il27Q8K3I6 234 aa42.17■■■■■ 4.34
Ldb1-207ENSMUST00000156585 Myt1lP97500 1187 aa42.15■■■■■ 4.34
Ldb1-207ENSMUST00000156585 PtprkP35822 1457 aa42.13■■■■■ 4.33
Ldb1-207ENSMUST00000156585 Ubl4bQ9CQ84 188 aa42.11■■■■■ 4.33
Ldb1-207ENSMUST00000156585 Shroom4Q1W617 1475 aa42.1■■■■■ 4.33
Ldb1-207ENSMUST00000156585 Arhgap35Q91YM2 1499 aa42.04■■■■■ 4.32
Ldb1-207ENSMUST00000156585 Cux2P70298 1426 aa42.04■■■■■ 4.32
Ldb1-207ENSMUST00000156585 Grin2bQ01097 1482 aa42.03■■■■■ 4.32
Ldb1-207ENSMUST00000156585 Map3k1P53349 1493 aa41.85■■■■■ 4.29
Ldb1-207ENSMUST00000156585 Npm1Q61937 292 aaKnown RBP41.81■■■■■ 4.28
Ldb1-207ENSMUST00000156585 Clip1Q922J3 1391 aa41.78■■■■■ 4.28
Ldb1-207ENSMUST00000156585 Mier1Q5UAK0 511 aa41.72■■■■■ 4.27
Ldb1-207ENSMUST00000156585 Baz1bQ9Z277 1479 aa41.68■■■■■ 4.26
Ldb1-207ENSMUST00000156585 LrpprcQ6PB66 1392 aaKnown RBP41.66■■■■■ 4.26
Ldb1-207ENSMUST00000156585 Mroh2bQ7M6Y6 1581 aa41.66■■■■■ 4.26
Ldb1-207ENSMUST00000156585 Efcab5A0JP43 1406 aa41.63■■■■■ 4.26
Ldb1-207ENSMUST00000156585 PogzQ8BZH4 1409 aaKnown RBP41.59■■■■■ 4.25
Ldb1-207ENSMUST00000156585 Eea1Q8BL66 1411 aa41.56■■■■■ 4.24
Ldb1-207ENSMUST00000156585 UbtfP25976 765 aaKnown RBP41.54■■■■■ 4.24
Ldb1-207ENSMUST00000156585 Zeb1Q64318 1117 aa41.52■■■■■ 4.24
Ldb1-207ENSMUST00000156585 NefmP08553 848 aa41.51■■■■■ 4.23
Ldb1-207ENSMUST00000156585 AqrQ8CFQ3 1481 aaKnown RBP41.49■■■■■ 4.23
Ldb1-207ENSMUST00000156585 Duox2A2AQ99 1517 aa41.48■■■■■ 4.23
Ldb1-207ENSMUST00000156585 Arap1Q4LDD4 1452 aa41.39■■■■■ 4.22
Ldb1-207ENSMUST00000156585 Setd5Q5XJV7 1441 aa41.37■■■■■ 4.21
Ldb1-207ENSMUST00000156585 Mrc2Q64449 1479 aa41.33■■■■■ 4.21
Ldb1-207ENSMUST00000156585 Dhx29Q6PGC1 1365 aaKnown RBP41.32■■■■■ 4.2
Ldb1-207ENSMUST00000156585 Arhgef5E9Q7D5 1581 aa41.3■■■■■ 4.2
Ldb1-207ENSMUST00000156585 Plekhg3Q4VAC9 1341 aa41.3■■■■■ 4.2
Ldb1-207ENSMUST00000156585 Erich3F6QRE9 1637 aa41.26■■■■■ 4.19
Ldb1-207ENSMUST00000156585 Carmil1Q6EDY6 1374 aa41.25■■■■■ 4.19
Ldb1-207ENSMUST00000156585 Ankrd26Q811D2 1581 aa41.22■■■■■ 4.19
Ldb1-207ENSMUST00000156585 Samd9lQ69Z37 1561 aa41.17■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Dnajc5bQ9CQ94 199 aa41.17■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Kif21aQ9QXL2 1672 aa41.15■■■■■ 4.18
Ldb1-207ENSMUST00000156585 SynmQ70IV5 1561 aa41.15■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Crocc2F6XLV1 1638 aa41.13■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Ap3b1Q9Z1T1 1105 aa41.06■■■■■ 4.16
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms