RNA–Protein interactions for RNA: ENSMUST00000156585.7

Ldb1-207, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-207ENSMUST00000156585 NischQ80TM9 1593 aa54.95■■■■■ 6.39
Ldb1-207ENSMUST00000156585 Gm35339A0A140LHH9 1649 aa54.51■■■■■ 6.32
Ldb1-207ENSMUST00000156585 Abcc9P70170 1546 aa53.38■■■■■ 6.14
Ldb1-207ENSMUST00000156585 Abcc8B2RUS7 1588 aa52.4■■■■■ 5.98
Ldb1-207ENSMUST00000156585 Rhox8Q6VSS7 320 aa49.98■■■■■ 5.59
Ldb1-207ENSMUST00000156585 ScribQ80U72 1612 aa49.13■■■■■ 5.46
Ldb1-207ENSMUST00000156585 Rtl1Q7M732 1744 aa49.06■■■■■ 5.44
Ldb1-207ENSMUST00000156585 Dcaf1Q80TR8 1506 aa48.92■■■■■ 5.42
Ldb1-207ENSMUST00000156585 Kdm5dQ62240 1548 aa48.1■■■■■ 5.29
Ldb1-207ENSMUST00000156585 Rb1cc1Q9ESK9 1588 aa48.1■■■■■ 5.29
Ldb1-207ENSMUST00000156585 Ccdc180J3QNE4 1664 aa47.92■■■■■ 5.26
Ldb1-207ENSMUST00000156585 NacadQ5SWP3 1504 aa47.89■■■■■ 5.26
Ldb1-207ENSMUST00000156585 Baz1aO88379 1555 aa47.57■■■■■ 5.21
Ldb1-207ENSMUST00000156585 Zcchc6Q5BLK4 1491 aaKnown RBP47.32■■■■■ 5.17
Ldb1-207ENSMUST00000156585 Crybg2B7ZCC2 1516 aa46.97■■■■■ 5.11
Ldb1-207ENSMUST00000156585 Sycp2Q9CUU3 1500 aa46.85■■■■■ 5.09
Ldb1-207ENSMUST00000156585 Smarca2Q6DIC0 1577 aa46.42■■■■■ 5.02
Ldb1-207ENSMUST00000156585 Ccdc136Q3TVA9 1136 aa46.39■■■■■ 5.02
Ldb1-207ENSMUST00000156585 BicraF8VPZ9 1578 aa45.81■■■■■ 4.92
Ldb1-207ENSMUST00000156585 HrcG5E8J6 738 aa45.74■■■■■ 4.91
Ldb1-207ENSMUST00000156585 Trim41Q5NCC3 630 aa45.73■■■■■ 4.91
Ldb1-207ENSMUST00000156585 Cecr2E9Q2Z1 1453 aa45.35■■■■■ 4.85
Ldb1-207ENSMUST00000156585 Brd4Q9ESU6 1400 aaKnown RBP45.29■■■■■ 4.84
Ldb1-207ENSMUST00000156585 Synj1Q8CHC4 1574 aa44.9■■■■■ 4.78
Ldb1-207ENSMUST00000156585 CftrP26361 1476 aa44.73■■■■■ 4.75
Ldb1-207ENSMUST00000156585 Smarca4Q3TKT4 1613 aaKnown RBP44.69■■■■■ 4.75
Ldb1-207ENSMUST00000156585 Cep164Q5DU05 1446 aa44.6■■■■■ 4.73
Ldb1-207ENSMUST00000156585 Cttnbp2B9EJA2 1648 aa44.59■■■■■ 4.73
Ldb1-207ENSMUST00000156585 Golga3P55937 1487 aa44.56■■■■■ 4.72
Ldb1-207ENSMUST00000156585 Cngb1E1AZ71 1325 aa44.48■■■■■ 4.71
Ldb1-207ENSMUST00000156585 Esf1Q3V1V3 845 aaKnown RBP44.24■■■■■ 4.67
Ldb1-207ENSMUST00000156585 Rsf1E9PWW9 1441 aaKnown RBP44.22■■■■■ 4.67
Ldb1-207ENSMUST00000156585 Top2bQ64511 1612 aa44.18■■■■■ 4.66
Ldb1-207ENSMUST00000156585 Iqgap2Q3UQ44 1575 aa44.12■■■■■ 4.65
Ldb1-207ENSMUST00000156585 Atad2bE9Q166 1460 aaKnown RBP44.11■■■■■ 4.65
Ldb1-207ENSMUST00000156585 Chic1Q8CBW7 227 aa44.07■■■■■ 4.65
Ldb1-207ENSMUST00000156585 Pds5bQ4VA53 1446 aaKnown RBP44.03■■■■■ 4.64
Ldb1-207ENSMUST00000156585 Ccdc88bQ4QRL3 1481 aa44.02■■■■■ 4.64
Ldb1-207ENSMUST00000156585 Rpgrip1Q9EPQ2 1331 aa43.68■■■■■ 4.58
Ldb1-207ENSMUST00000156585 Cc2d2aQ8CFW7 1633 aa43.67■■■■■ 4.58
Ldb1-207ENSMUST00000156585 Fmn1Q05860 1466 aa43.56■■■■■ 4.56
Ldb1-207ENSMUST00000156585 Gab3Q8BSM5 595 aa43.49■■■■■ 4.55
Ldb1-207ENSMUST00000156585 Ehmt2Q9Z148 1263 aaKnown RBP43.46■■■■■ 4.55
Ldb1-207ENSMUST00000156585 Acin1Q9JIX8 1338 aaKnown RBP43.37■■■■■ 4.53
Ldb1-207ENSMUST00000156585 Wdr62Q3U3T8 1523 aa43.35■■■■■ 4.53
Ldb1-207ENSMUST00000156585 Frmpd1A2AKB4 1549 aa43.32■■■■■ 4.53
Ldb1-207ENSMUST00000156585 Top2aQ01320 1528 aaKnown RBP43.22■■■■■ 4.51
Ldb1-207ENSMUST00000156585 Ercc6F8VPZ5 1481 aa43.19■■■■■ 4.5
Ldb1-207ENSMUST00000156585 TnnQ80Z71 1560 aa43.06■■■■■ 4.48
Ldb1-207ENSMUST00000156585 Rapgef2Q8CHG7 1496 aa42.94■■■■■ 4.46
Ldb1-207ENSMUST00000156585 Lamc3Q9R0B6 1581 aa42.85■■■■■ 4.45
Ldb1-207ENSMUST00000156585 Unc13aQ4KUS2 1712 aa42.84■■■■■ 4.45
Ldb1-207ENSMUST00000156585 Thoc2B1AZI6 1594 aaKnown RBP42.73■■■■■ 4.43
Ldb1-207ENSMUST00000156585 Kif15Q6P9L6 1387 aa42.61■■■■■ 4.41
Ldb1-207ENSMUST00000156585 Cep162Q6ZQ06 1403 aa42.57■■■■■ 4.4
Ldb1-207ENSMUST00000156585 Phldb1Q6PDH0 1371 aaKnown RBP42.52■■■■■ 4.4
Ldb1-207ENSMUST00000156585 Camsap1A2AHC3 1581 aa42.37■■■■■ 4.37
Ldb1-207ENSMUST00000156585 Npm2Q80W85 207 aa42.37■■■■■ 4.37
Ldb1-207ENSMUST00000156585 Eif4g1Q6NZJ6 1600 aaKnown RBP42.35■■■■■ 4.37
Ldb1-207ENSMUST00000156585 Fam135aQ6NS59 1506 aa42.25■■■■■ 4.35
Ldb1-207ENSMUST00000156585 Ccdc18Q640L5 1455 aa42.25■■■■■ 4.35
Ldb1-207ENSMUST00000156585 NrkQ9R0G8 1455 aa42.19■■■■■ 4.34
Ldb1-207ENSMUST00000156585 Il27Q8K3I6 234 aa42.17■■■■■ 4.34
Ldb1-207ENSMUST00000156585 Myt1lP97500 1187 aa42.15■■■■■ 4.34
Ldb1-207ENSMUST00000156585 PtprkP35822 1457 aa42.13■■■■■ 4.33
Ldb1-207ENSMUST00000156585 Ubl4bQ9CQ84 188 aa42.11■■■■■ 4.33
Ldb1-207ENSMUST00000156585 Shroom4Q1W617 1475 aa42.1■■■■■ 4.33
Ldb1-207ENSMUST00000156585 Arhgap35Q91YM2 1499 aa42.04■■■■■ 4.32
Ldb1-207ENSMUST00000156585 Cux2P70298 1426 aa42.04■■■■■ 4.32
Ldb1-207ENSMUST00000156585 Grin2bQ01097 1482 aa42.03■■■■■ 4.32
Ldb1-207ENSMUST00000156585 Map3k1P53349 1493 aa41.85■■■■■ 4.29
Ldb1-207ENSMUST00000156585 Npm1Q61937 292 aaKnown RBP41.81■■■■■ 4.28
Ldb1-207ENSMUST00000156585 Clip1Q922J3 1391 aa41.78■■■■■ 4.28
Ldb1-207ENSMUST00000156585 Mier1Q5UAK0 511 aa41.72■■■■■ 4.27
Ldb1-207ENSMUST00000156585 Baz1bQ9Z277 1479 aa41.68■■■■■ 4.26
Ldb1-207ENSMUST00000156585 LrpprcQ6PB66 1392 aaKnown RBP41.66■■■■■ 4.26
Ldb1-207ENSMUST00000156585 Mroh2bQ7M6Y6 1581 aa41.66■■■■■ 4.26
Ldb1-207ENSMUST00000156585 Efcab5A0JP43 1406 aa41.63■■■■■ 4.26
Ldb1-207ENSMUST00000156585 PogzQ8BZH4 1409 aaKnown RBP41.59■■■■■ 4.25
Ldb1-207ENSMUST00000156585 Eea1Q8BL66 1411 aa41.56■■■■■ 4.24
Ldb1-207ENSMUST00000156585 UbtfP25976 765 aaKnown RBP41.54■■■■■ 4.24
Ldb1-207ENSMUST00000156585 Zeb1Q64318 1117 aa41.52■■■■■ 4.24
Ldb1-207ENSMUST00000156585 NefmP08553 848 aa41.51■■■■■ 4.23
Ldb1-207ENSMUST00000156585 AqrQ8CFQ3 1481 aaKnown RBP41.49■■■■■ 4.23
Ldb1-207ENSMUST00000156585 Duox2A2AQ99 1517 aa41.48■■■■■ 4.23
Ldb1-207ENSMUST00000156585 Arap1Q4LDD4 1452 aa41.39■■■■■ 4.22
Ldb1-207ENSMUST00000156585 Setd5Q5XJV7 1441 aa41.37■■■■■ 4.21
Ldb1-207ENSMUST00000156585 Mrc2Q64449 1479 aa41.33■■■■■ 4.21
Ldb1-207ENSMUST00000156585 Dhx29Q6PGC1 1365 aaKnown RBP41.32■■■■■ 4.2
Ldb1-207ENSMUST00000156585 Arhgef5E9Q7D5 1581 aa41.3■■■■■ 4.2
Ldb1-207ENSMUST00000156585 Plekhg3Q4VAC9 1341 aa41.3■■■■■ 4.2
Ldb1-207ENSMUST00000156585 Erich3F6QRE9 1637 aa41.26■■■■■ 4.19
Ldb1-207ENSMUST00000156585 Carmil1Q6EDY6 1374 aa41.25■■■■■ 4.19
Ldb1-207ENSMUST00000156585 Ankrd26Q811D2 1581 aa41.22■■■■■ 4.19
Ldb1-207ENSMUST00000156585 Samd9lQ69Z37 1561 aa41.17■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Dnajc5bQ9CQ94 199 aa41.17■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Kif21aQ9QXL2 1672 aa41.15■■■■■ 4.18
Ldb1-207ENSMUST00000156585 SynmQ70IV5 1561 aa41.15■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Crocc2F6XLV1 1638 aa41.13■■■■■ 4.18
Ldb1-207ENSMUST00000156585 Ap3b1Q9Z1T1 1105 aa41.06■■■■■ 4.16
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms