RNA–Protein interactions for RNA: ENSMUST00000141135.4

Abca4-207, Transcript of Retinal-specific ATP-binding cassette transporter, mousemouse

TSL 1 (best) BASIC

Gene Abca4, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4-207ENSMUST00000141135 Gm35339A0A140LHH9 1649 aa14.26□□□□□ -0.13
Abca4-207ENSMUST00000141135 NischQ80TM9 1593 aa13.52□□□□□ -0.24
Abca4-207ENSMUST00000141135 Abcc9P70170 1546 aa13.34□□□□□ -0.27
Abca4-207ENSMUST00000141135 Abcc8B2RUS7 1588 aa13.06□□□□□ -0.32
Abca4-207ENSMUST00000141135 ScribQ80U72 1612 aa12.7□□□□□ -0.38
Abca4-207ENSMUST00000141135 Dcaf1Q80TR8 1506 aa12.5□□□□□ -0.41
Abca4-207ENSMUST00000141135 Ccdc180J3QNE4 1664 aa12.47□□□□□ -0.41
Abca4-207ENSMUST00000141135 Rtl1Q7M732 1744 aa12.22□□□□□ -0.45
Abca4-207ENSMUST00000141135 NacadQ5SWP3 1504 aa12.07□□□□□ -0.48
Abca4-207ENSMUST00000141135 Kdm5dQ62240 1548 aa12.05□□□□□ -0.48
Abca4-207ENSMUST00000141135 Crybg2B7ZCC2 1516 aa11.94□□□□□ -0.5
Abca4-207ENSMUST00000141135 Sycp2Q9CUU3 1500 aa11.91□□□□□ -0.5
Abca4-207ENSMUST00000141135 BicraF8VPZ9 1578 aa11.87□□□□□ -0.51
Abca4-207ENSMUST00000141135 Rb1cc1Q9ESK9 1588 aa11.82□□□□□ -0.52
Abca4-207ENSMUST00000141135 Baz1aO88379 1555 aa11.81□□□□□ -0.52
Abca4-207ENSMUST00000141135 Zcchc6Q5BLK4 1491 aaKnown RBP11.63□□□□□ -0.55
Abca4-207ENSMUST00000141135 Thoc2B1AZI6 1594 aaKnown RBP11.59□□□□□ -0.55
Abca4-207ENSMUST00000141135 Smarca2Q6DIC0 1577 aa11.58□□□□□ -0.56
Abca4-207ENSMUST00000141135 Baz1bQ9Z277 1479 aa11.4□□□□□ -0.58
Abca4-207ENSMUST00000141135 Pds5bQ4VA53 1446 aaKnown RBP11.26□□□□□ -0.61
Abca4-207ENSMUST00000141135 Rhox8Q6VSS7 320 aa11.25□□□□□ -0.61
Abca4-207ENSMUST00000141135 Fam135aQ6NS59 1506 aa11.23□□□□□ -0.61
Abca4-207ENSMUST00000141135 Dnajc5bQ9CQ94 199 aa11.22□□□□□ -0.61
Abca4-207ENSMUST00000141135 Atad2bE9Q166 1460 aaKnown RBP11.19□□□□□ -0.62
Abca4-207ENSMUST00000141135 Smarca4Q3TKT4 1613 aaKnown RBP11.13□□□□□ -0.63
Abca4-207ENSMUST00000141135 Cttnbp2B9EJA2 1648 aa11.12□□□□□ -0.63
Abca4-207ENSMUST00000141135 Cc2d2aQ8CFW7 1633 aa11.1□□□□□ -0.63
Abca4-207ENSMUST00000141135 Unc13aQ4KUS2 1712 aa11.1□□□□□ -0.63
Abca4-207ENSMUST00000141135 Wdr62Q3U3T8 1523 aa11.06□□□□□ -0.64
Abca4-207ENSMUST00000141135 Chic1Q8CBW7 227 aa11.04□□□□□ -0.64
Abca4-207ENSMUST00000141135 Top2bQ64511 1612 aa11.04□□□□□ -0.64
Abca4-207ENSMUST00000141135 Brd4Q9ESU6 1400 aaKnown RBP11.03□□□□□ -0.64
Abca4-207ENSMUST00000141135 Iqgap2Q3UQ44 1575 aa11.03□□□□□ -0.64
Abca4-207ENSMUST00000141135 Cecr2E9Q2Z1 1453 aa10.99□□□□□ -0.65
Abca4-207ENSMUST00000141135 Synj1Q8CHC4 1574 aa10.99□□□□□ -0.65
Abca4-207ENSMUST00000141135 CftrP26361 1476 aa10.97□□□□□ -0.65
Abca4-207ENSMUST00000141135 Frmpd1A2AKB4 1549 aa10.95□□□□□ -0.66
Abca4-207ENSMUST00000141135 HrcG5E8J6 738 aa10.89□□□□□ -0.67
Abca4-207ENSMUST00000141135 TnnQ80Z71 1560 aa10.87□□□□□ -0.67
Abca4-207ENSMUST00000141135 Ercc6F8VPZ5 1481 aa10.87□□□□□ -0.67
Abca4-207ENSMUST00000141135 DiexfQ8BTT6 772 aaKnown RBP10.84□□□□□ -0.67
Abca4-207ENSMUST00000141135 Gpatch8A2A6A1 1505 aa10.82□□□□□ -0.68
Abca4-207ENSMUST00000141135 Golga3P55937 1487 aa10.82□□□□□ -0.68
Abca4-207ENSMUST00000141135 Phldb1Q6PDH0 1371 aaKnown RBP10.75□□□□□ -0.69
Abca4-207ENSMUST00000141135 Trim41Q5NCC3 630 aa10.73□□□□□ -0.69
Abca4-207ENSMUST00000141135 Cep164Q5DU05 1446 aa10.73□□□□□ -0.69
Abca4-207ENSMUST00000141135 Lamc3Q9R0B6 1581 aa10.72□□□□□ -0.69
Abca4-207ENSMUST00000141135 Ttbk1Q6PCN3 1308 aa10.71□□□□□ -0.7
Abca4-207ENSMUST00000141135 Fmn1Q05860 1466 aa10.68□□□□□ -0.7
Abca4-207ENSMUST00000141135 Top2aQ01320 1528 aaKnown RBP10.66□□□□□ -0.7
Abca4-207ENSMUST00000141135 Mrc2Q64449 1479 aa10.66□□□□□ -0.7
Abca4-207ENSMUST00000141135 Eif4g1Q6NZJ6 1600 aaKnown RBP10.63□□□□□ -0.71
Abca4-207ENSMUST00000141135 Lrriq1Q0P5X1 1673 aa10.59□□□□□ -0.71
Abca4-207ENSMUST00000141135 Ube2uB1AUC4 352 aa10.59□□□□□ -0.71
Abca4-207ENSMUST00000141135 Amer1Q7TS75 1132 aa10.57□□□□□ -0.72
Abca4-207ENSMUST00000141135 Rsf1E9PWW9 1441 aaKnown RBP10.53□□□□□ -0.72
Abca4-207ENSMUST00000141135 Eif4g3Q80XI3 1579 aaKnown RBP10.52□□□□□ -0.72
Abca4-207ENSMUST00000141135 Kif21aQ9QXL2 1672 aa10.5□□□□□ -0.73
Abca4-207ENSMUST00000141135 Ccdc88bQ4QRL3 1481 aa10.49□□□□□ -0.73
Abca4-207ENSMUST00000141135 Rapgef2Q8CHG7 1496 aa10.47□□□□□ -0.73
Abca4-207ENSMUST00000141135 Camsap1A2AHC3 1581 aa10.47□□□□□ -0.73
Abca4-207ENSMUST00000141135 Ccdc136Q3TVA9 1136 aa10.47□□□□□ -0.73
Abca4-207ENSMUST00000141135 Shroom2A2ALU4 1481 aa10.45□□□□□ -0.74
Abca4-207ENSMUST00000141135 Mapk8ip2Q9ERE9 830 aa10.45□□□□□ -0.74
Abca4-207ENSMUST00000141135 Phf23Q8BSN5 401 aa10.44□□□□□ -0.74
Abca4-207ENSMUST00000141135 Pbrm1Q8BSQ9 1634 aaKnown RBP10.44□□□□□ -0.74
Abca4-207ENSMUST00000141135 NrkQ9R0G8 1455 aa10.43□□□□□ -0.74
Abca4-207ENSMUST00000141135 Plppr3Q7TPB0 716 aa10.4□□□□□ -0.75
Abca4-207ENSMUST00000141135 Map3k1P53349 1493 aa10.39□□□□□ -0.75
Abca4-207ENSMUST00000141135 AqrQ8CFQ3 1481 aaKnown RBP10.35□□□□□ -0.75
Abca4-207ENSMUST00000141135 Rpgrip1Q9EPQ2 1331 aa10.34□□□□□ -0.75
Abca4-207ENSMUST00000141135 Dnajc5P60904 198 aa10.33□□□□□ -0.76
Abca4-207ENSMUST00000141135 Grin2bQ01097 1482 aa10.32□□□□□ -0.76
Abca4-207ENSMUST00000141135 Erich3F6QRE9 1637 aa10.31□□□□□ -0.76
Abca4-207ENSMUST00000141135 Shroom4Q1W617 1475 aa10.31□□□□□ -0.76
Abca4-207ENSMUST00000141135 Setd1bQ8CFT2 1985 aa10.27□□□□□ -0.77
Abca4-207ENSMUST00000141135 Kcna4Q61423 654 aa10.25□□□□□ -0.77
Abca4-207ENSMUST00000141135 Ubl4bQ9CQ84 188 aa10.25□□□□□ -0.77
Abca4-207ENSMUST00000141135 Ccdc18Q640L5 1455 aa10.25□□□□□ -0.77
Abca4-207ENSMUST00000141135 Col17a1Q07563 1470 aa10.24□□□□□ -0.77
Abca4-207ENSMUST00000141135 Urb2E9Q7L1 1524 aaKnown RBP10.24□□□□□ -0.77
Abca4-207ENSMUST00000141135 Zcchc11B2RX14 1644 aaKnown RBP10.24□□□□□ -0.77
Abca4-207ENSMUST00000141135 Cux2P70298 1426 aa10.23□□□□□ -0.77
Abca4-207ENSMUST00000141135 Efcab5A0JP43 1406 aa10.22□□□□□ -0.77
Abca4-207ENSMUST00000141135 Rusc2Q80U22 1514 aa10.22□□□□□ -0.77
Abca4-207ENSMUST00000141135 Peg3Q3URU2 1571 aa10.21□□□□□ -0.77
Abca4-207ENSMUST00000141135 Cep162Q6ZQ06 1403 aa10.21□□□□□ -0.78
Abca4-207ENSMUST00000141135 Arhgap35Q91YM2 1499 aa10.2□□□□□ -0.78
Abca4-207ENSMUST00000141135 PogzQ8BZH4 1409 aaKnown RBP10.2□□□□□ -0.78
Abca4-207ENSMUST00000141135 EprsQ8CGC7 1512 aaKnown RBP10.19□□□□□ -0.78
Abca4-207ENSMUST00000141135 Mroh2bQ7M6Y6 1581 aa10.18□□□□□ -0.78
Abca4-207ENSMUST00000141135 Ehmt2Q9Z148 1263 aaKnown RBP10.18□□□□□ -0.78
Abca4-207ENSMUST00000141135 Crocc2F6XLV1 1638 aa10.17□□□□□ -0.78
Abca4-207ENSMUST00000141135 Kif15Q6P9L6 1387 aa10.17□□□□□ -0.78
Abca4-207ENSMUST00000141135 Lmo7E9PYF4 1699 aaKnown RBP10.16□□□□□ -0.78
Abca4-207ENSMUST00000141135 SynmQ70IV5 1561 aa10.14□□□□□ -0.79
Abca4-207ENSMUST00000141135 Polr1aO35134 1717 aaKnown RBP10.13□□□□□ -0.79
Abca4-207ENSMUST00000141135 PtprkP35822 1457 aa10.12□□□□□ -0.79
Abca4-207ENSMUST00000141135 Samd9lQ69Z37 1561 aa10.12□□□□□ -0.79
Abca4-207ENSMUST00000141135 Adamts12Q811B3 1600 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms