RNA–Protein interactions for RNA: ENSMUST00000137771.1

Ldb1-205, Transcript of LIM domain-binding protein 1, mousemouse

TSL 5 BASIC

Gene Ldb1, Length 2,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-205ENSMUST00000137771 NischQ80TM9 1593 aa32.65■■■□□ 2.82
Ldb1-205ENSMUST00000137771 Gm35339A0A140LHH9 1649 aa32.31■■■□□ 2.76
Ldb1-205ENSMUST00000137771 Abcc9P70170 1546 aa31.79■■■□□ 2.68
Ldb1-205ENSMUST00000137771 Abcc8B2RUS7 1588 aa31.02■■■□□ 2.56
Ldb1-205ENSMUST00000137771 Rtl1Q7M732 1744 aa30.27■■■□□ 2.44
Ldb1-205ENSMUST00000137771 Rhox8Q6VSS7 320 aa29.95■■■□□ 2.39
Ldb1-205ENSMUST00000137771 Ccdc180J3QNE4 1664 aa29.58■■■□□ 2.33
Ldb1-205ENSMUST00000137771 Dcaf1Q80TR8 1506 aa29.2■■■□□ 2.27
Ldb1-205ENSMUST00000137771 Zcchc6Q5BLK4 1491 aaKnown RBP28.85■■■□□ 2.21
Ldb1-205ENSMUST00000137771 ScribQ80U72 1612 aa28.81■■■□□ 2.2
Ldb1-205ENSMUST00000137771 Rb1cc1Q9ESK9 1588 aa28.61■■■□□ 2.17
Ldb1-205ENSMUST00000137771 Baz1aO88379 1555 aa28.36■■■□□ 2.13
Ldb1-205ENSMUST00000137771 Kdm5dQ62240 1548 aa28.31■■■□□ 2.12
Ldb1-205ENSMUST00000137771 NacadQ5SWP3 1504 aa28.18■■■□□ 2.1
Ldb1-205ENSMUST00000137771 HrcG5E8J6 738 aa28.08■■■□□ 2.09
Ldb1-205ENSMUST00000137771 Crybg2B7ZCC2 1516 aa28.02■■■□□ 2.08
Ldb1-205ENSMUST00000137771 Rpgrip1Q9EPQ2 1331 aa27.99■■■□□ 2.07
Ldb1-205ENSMUST00000137771 Smarca2Q6DIC0 1577 aa27.72■■■□□ 2.03
Ldb1-205ENSMUST00000137771 Ccdc136Q3TVA9 1136 aa27.7■■■□□ 2.03
Ldb1-205ENSMUST00000137771 Sycp2Q9CUU3 1500 aa27.53■■■□□ 2
Ldb1-205ENSMUST00000137771 Trim41Q5NCC3 630 aa27.48■■□□□ 1.99
Ldb1-205ENSMUST00000137771 Acin1Q9JIX8 1338 aaKnown RBP27.34■■□□□ 1.97
Ldb1-205ENSMUST00000137771 Cep164Q5DU05 1446 aa27.2■■□□□ 1.94
Ldb1-205ENSMUST00000137771 Brd4Q9ESU6 1400 aaKnown RBP27.06■■□□□ 1.92
Ldb1-205ENSMUST00000137771 BicraF8VPZ9 1578 aa26.83■■□□□ 1.88
Ldb1-205ENSMUST00000137771 Cecr2E9Q2Z1 1453 aa26.79■■□□□ 1.88
Ldb1-205ENSMUST00000137771 Golga3P55937 1487 aa26.74■■□□□ 1.87
Ldb1-205ENSMUST00000137771 Synj1Q8CHC4 1574 aa26.7■■□□□ 1.87
Ldb1-205ENSMUST00000137771 Ehmt2Q9Z148 1263 aaKnown RBP26.7■■□□□ 1.87
Ldb1-205ENSMUST00000137771 Rsf1E9PWW9 1441 aaKnown RBP26.66■■□□□ 1.86
Ldb1-205ENSMUST00000137771 CftrP26361 1476 aa26.57■■□□□ 1.84
Ldb1-205ENSMUST00000137771 Cngb1E1AZ71 1325 aa26.56■■□□□ 1.84
Ldb1-205ENSMUST00000137771 Cttnbp2B9EJA2 1648 aa26.54■■□□□ 1.84
Ldb1-205ENSMUST00000137771 Top2bQ64511 1612 aa26.5■■□□□ 1.83
Ldb1-205ENSMUST00000137771 Chic1Q8CBW7 227 aa26.48■■□□□ 1.83
Ldb1-205ENSMUST00000137771 Ccdc88bQ4QRL3 1481 aa26.45■■□□□ 1.82
Ldb1-205ENSMUST00000137771 Smarca4Q3TKT4 1613 aaKnown RBP26.38■■□□□ 1.81
Ldb1-205ENSMUST00000137771 Esf1Q3V1V3 845 aaKnown RBP26.22■■□□□ 1.79
Ldb1-205ENSMUST00000137771 Gab3Q8BSM5 595 aa26.15■■□□□ 1.78
Ldb1-205ENSMUST00000137771 Cc2d2aQ8CFW7 1633 aa26.09■■□□□ 1.77
Ldb1-205ENSMUST00000137771 Fmn1Q05860 1466 aa26.09■■□□□ 1.77
Ldb1-205ENSMUST00000137771 Pcgf6Q99NA9 353 aa26.03■■□□□ 1.76
Ldb1-205ENSMUST00000137771 Top2aQ01320 1528 aaKnown RBP25.96■■□□□ 1.75
Ldb1-205ENSMUST00000137771 Iqgap2Q3UQ44 1575 aa25.96■■□□□ 1.75
Ldb1-205ENSMUST00000137771 Rapgef2Q8CHG7 1496 aa25.96■■□□□ 1.75
Ldb1-205ENSMUST00000137771 NefmP08553 848 aa25.89■■□□□ 1.74
Ldb1-205ENSMUST00000137771 Atad2bE9Q166 1460 aaKnown RBP25.86■■□□□ 1.73
Ldb1-205ENSMUST00000137771 Pds5bQ4VA53 1446 aaKnown RBP25.73■■□□□ 1.71
Ldb1-205ENSMUST00000137771 Mier1Q5UAK0 511 aa25.68■■□□□ 1.7
Ldb1-205ENSMUST00000137771 TnnQ80Z71 1560 aa25.67■■□□□ 1.7
Ldb1-205ENSMUST00000137771 Cep162Q6ZQ06 1403 aa25.67■■□□□ 1.7
Ldb1-205ENSMUST00000137771 Eif4g1Q6NZJ6 1600 aaKnown RBP25.58■■□□□ 1.68
Ldb1-205ENSMUST00000137771 Supt5hO55201 1082 aaKnown RBP25.56■■□□□ 1.68
Ldb1-205ENSMUST00000137771 Wdr62Q3U3T8 1523 aa25.45■■□□□ 1.66
Ldb1-205ENSMUST00000137771 Lamc3Q9R0B6 1581 aa25.4■■□□□ 1.66
Ldb1-205ENSMUST00000137771 Frmpd1A2AKB4 1549 aa25.4■■□□□ 1.66
Ldb1-205ENSMUST00000137771 Npm2Q80W85 207 aa25.32■■□□□ 1.64
Ldb1-205ENSMUST00000137771 NrkQ9R0G8 1455 aa25.3■■□□□ 1.64
Ldb1-205ENSMUST00000137771 Zeb1Q64318 1117 aa25.28■■□□□ 1.64
Ldb1-205ENSMUST00000137771 UbtfP25976 765 aaKnown RBP25.26■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Myt1lP97500 1187 aa25.25■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Ercc6F8VPZ5 1481 aa25.24■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Clip1Q922J3 1391 aa25.24■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Arhgap35Q91YM2 1499 aa25.22■■□□□ 1.63
Ldb1-205ENSMUST00000137771 Unc13aQ4KUS2 1712 aa25.18■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Map3k1P53349 1493 aa25.17■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Shroom4Q1W617 1475 aa25.14■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Camsap1A2AHC3 1581 aa25.14■■□□□ 1.62
Ldb1-205ENSMUST00000137771 Ccdc18Q640L5 1455 aa25.11■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Las1lA2BE28 776 aaKnown RBP25.1■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Kif15Q6P9L6 1387 aa25.09■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Eea1Q8BL66 1411 aa25.08■■□□□ 1.61
Ldb1-205ENSMUST00000137771 PtprkP35822 1457 aa25.08■■□□□ 1.61
Ldb1-205ENSMUST00000137771 Ncapd3Q6ZQK0 1506 aa25.05■■□□□ 1.6
Ldb1-205ENSMUST00000137771 Sall2Q9QX96 1004 aa25.01■■□□□ 1.59
Ldb1-205ENSMUST00000137771 Arhgef5E9Q7D5 1581 aa24.98■■□□□ 1.59
Ldb1-205ENSMUST00000137771 Grin2bQ01097 1482 aa24.97■■□□□ 1.59
Ldb1-205ENSMUST00000137771 Arap1Q4LDD4 1452 aa24.96■■□□□ 1.59
Ldb1-205ENSMUST00000137771 AqrQ8CFQ3 1481 aaKnown RBP24.91■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Erich3F6QRE9 1637 aa24.9■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Mroh2bQ7M6Y6 1581 aa24.9■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Plekhg3Q4VAC9 1341 aa24.9■■□□□ 1.58
Ldb1-205ENSMUST00000137771 Setd5Q5XJV7 1441 aa24.87■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Phldb1Q6PDH0 1371 aaKnown RBP24.85■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Neurod1Q60867 357 aa24.85■■□□□ 1.57
Ldb1-205ENSMUST00000137771 TonslQ6NZL6 1363 aa24.84■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Tiam1Q60610 1591 aa24.83■■□□□ 1.57
Ldb1-205ENSMUST00000137771 ClspnQ80YR7 1315 aa24.83■■□□□ 1.57
Ldb1-205ENSMUST00000137771 Thoc2B1AZI6 1594 aaKnown RBP24.8■■□□□ 1.56
Ldb1-205ENSMUST00000137771 Il27Q8K3I6 234 aa24.79■■□□□ 1.56
Ldb1-205ENSMUST00000137771 TchhA0A0B4J1F9 1599 aa24.77■■□□□ 1.56
Ldb1-205ENSMUST00000137771 Ankrd26Q811D2 1581 aa24.75■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Efcab5A0JP43 1406 aa24.74■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Baz1bQ9Z277 1479 aa24.73■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Kdm5bQ80Y84 1544 aa24.72■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Wdr66E9Q743 1299 aa24.71■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Aebp2Q9Z248 504 aaKnown RBP24.71■■□□□ 1.55
Ldb1-205ENSMUST00000137771 Cux2P70298 1426 aa24.66■■□□□ 1.54
Ldb1-205ENSMUST00000137771 Naip1Q9QWK5 1403 aa24.66■■□□□ 1.54
Ldb1-205ENSMUST00000137771 Lmo7E9PYF4 1699 aaKnown RBP24.64■■□□□ 1.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms