RNA–Protein interactions for RNA: ENSMUST00000132527.8

Col9a3-203, Transcript of Collagen, type IX, alpha 3, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col9a3, Length 3,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a3-203ENSMUST00000132527 Rpgrip1Q9EPQ2 1331 aa31.27■■■□□ 2.6
Col9a3-203ENSMUST00000132527 NischQ80TM9 1593 aa30.7■■■□□ 2.5
Col9a3-203ENSMUST00000132527 Acin1Q9JIX8 1338 aaKnown RBP30.32■■■□□ 2.44
Col9a3-203ENSMUST00000132527 Rhox8Q6VSS7 320 aa30.21■■■□□ 2.43
Col9a3-203ENSMUST00000132527 Rtl1Q7M732 1744 aa30.17■■■□□ 2.42
Col9a3-203ENSMUST00000132527 Ccdc180J3QNE4 1664 aa30.11■■■□□ 2.41
Col9a3-203ENSMUST00000132527 Pcgf6Q99NA9 353 aa30.04■■■□□ 2.4
Col9a3-203ENSMUST00000132527 Abcc9P70170 1546 aa29.78■■■□□ 2.36
Col9a3-203ENSMUST00000132527 Ehmt2Q9Z148 1263 aaKnown RBP29.71■■■□□ 2.35
Col9a3-203ENSMUST00000132527 Gm35339A0A140LHH9 1649 aa29.19■■■□□ 2.26
Col9a3-203ENSMUST00000132527 Supt5hO55201 1082 aaKnown RBP29.13■■■□□ 2.25
Col9a3-203ENSMUST00000132527 Dcaf1Q80TR8 1506 aa29.08■■■□□ 2.25
Col9a3-203ENSMUST00000132527 Zcchc6Q5BLK4 1491 aaKnown RBP29.07■■■□□ 2.24
Col9a3-203ENSMUST00000132527 Trim41Q5NCC3 630 aa29.05■■■□□ 2.24
Col9a3-203ENSMUST00000132527 Neurod1Q60867 357 aa29.05■■■□□ 2.24
Col9a3-203ENSMUST00000132527 HrcG5E8J6 738 aa28.78■■■□□ 2.2
Col9a3-203ENSMUST00000132527 Abcc8B2RUS7 1588 aa28.77■■■□□ 2.2
Col9a3-203ENSMUST00000132527 Las1lA2BE28 776 aaKnown RBP28.63■■■□□ 2.17
Col9a3-203ENSMUST00000132527 1700123L14RikQ3V2K7 440 aa28.4■■■□□ 2.14
Col9a3-203ENSMUST00000132527 Zeb1Q64318 1117 aa28.15■■■□□ 2.1
Col9a3-203ENSMUST00000132527 Csrnp3P59055 597 aa28.13■■■□□ 2.09
Col9a3-203ENSMUST00000132527 Anks4bQ8K3X6 423 aa28.06■■■□□ 2.08
Col9a3-203ENSMUST00000132527 CenpbP27790 599 aa28.04■■■□□ 2.08
Col9a3-203ENSMUST00000132527 Cngb1E1AZ71 1325 aa27.99■■■□□ 2.07
Col9a3-203ENSMUST00000132527 Myt1Q8CFC2 1127 aa27.99■■■□□ 2.07
Col9a3-203ENSMUST00000132527 Sall2Q9QX96 1004 aa27.97■■■□□ 2.07
Col9a3-203ENSMUST00000132527 Ccdc136Q3TVA9 1136 aa27.94■■■□□ 2.06
Col9a3-203ENSMUST00000132527 NefmP08553 848 aa27.7■■■□□ 2.02
Col9a3-203ENSMUST00000132527 Aplp2Q06335 707 aa27.67■■■□□ 2.02
Col9a3-203ENSMUST00000132527 DiexfQ8BTT6 772 aaKnown RBP27.67■■■□□ 2.02
Col9a3-203ENSMUST00000132527 Mier1Q5UAK0 511 aa27.51■■□□□ 1.99
Col9a3-203ENSMUST00000132527 Cep164Q5DU05 1446 aa27.42■■□□□ 1.98
Col9a3-203ENSMUST00000132527 Gm38655A0A286YDK6 273 aa27.36■■□□□ 1.97
Col9a3-203ENSMUST00000132527 Cdk11bP24788 784 aaKnown RBP27.35■■□□□ 1.97
Col9a3-203ENSMUST00000132527 Nop58Q6DFW4 536 aaKnown RBP27.25■■□□□ 1.95
Col9a3-203ENSMUST00000132527 Bcl11aQ9QYE3 773 aa27.24■■□□□ 1.95
Col9a3-203ENSMUST00000132527 Aebp2Q9Z248 504 aaKnown RBP27.22■■□□□ 1.95
Col9a3-203ENSMUST00000132527 Wdr66E9Q743 1299 aa27.2■■□□□ 1.94
Col9a3-203ENSMUST00000132527 Gab3Q8BSM5 595 aa27■■□□□ 1.91
Col9a3-203ENSMUST00000132527 Ppargc1bQ8VHJ7 1014 aa27■■□□□ 1.91
Col9a3-203ENSMUST00000132527 ClspnQ80YR7 1315 aa26.97■■□□□ 1.91
Col9a3-203ENSMUST00000132527 Rb1cc1Q9ESK9 1588 aa26.96■■□□□ 1.91
Col9a3-203ENSMUST00000132527 Fam71e1A1L3C1 212 aa26.88■■□□□ 1.89
Col9a3-203ENSMUST00000132527 Chic1Q8CBW7 227 aa26.84■■□□□ 1.89
Col9a3-203ENSMUST00000132527 Amer1Q7TS75 1132 aa26.76■■□□□ 1.87
Col9a3-203ENSMUST00000132527 Rsf1E9PWW9 1441 aaKnown RBP26.7■■□□□ 1.87
Col9a3-203ENSMUST00000132527 Mapk8ip2Q9ERE9 830 aa26.65■■□□□ 1.86
Col9a3-203ENSMUST00000132527 Baz1aO88379 1555 aa26.65■■□□□ 1.86
Col9a3-203ENSMUST00000132527 SafbD3YXK2 937 aaKnown RBP26.63■■□□□ 1.85
Col9a3-203ENSMUST00000132527 PrkcshO08795 521 aa26.61■■□□□ 1.85
Col9a3-203ENSMUST00000132527 UbtfP25976 765 aaKnown RBP26.57■■□□□ 1.84
Col9a3-203ENSMUST00000132527 Hnrnpul2Q00PI9 745 aaKnown RBP26.55■■□□□ 1.84
Col9a3-203ENSMUST00000132527 Ifnlr1Q8CGK5 535 aa26.54■■□□□ 1.84
Col9a3-203ENSMUST00000132527 TonslQ6NZL6 1363 aa26.39■■□□□ 1.81
Col9a3-203ENSMUST00000132527 Ccdc88bQ4QRL3 1481 aa26.33■■□□□ 1.81
Col9a3-203ENSMUST00000132527 Tnnt3Q9QZ47 272 aa26.33■■□□□ 1.81
Col9a3-203ENSMUST00000132527 Ap3b1Q9Z1T1 1105 aa26.18■■□□□ 1.78
Col9a3-203ENSMUST00000132527 Smarca2Q6DIC0 1577 aa26.16■■□□□ 1.78
Col9a3-203ENSMUST00000132527 ScribQ80U72 1612 aa26.14■■□□□ 1.78
Col9a3-203ENSMUST00000132527 Anp32aO35381 247 aa26.13■■□□□ 1.77
Col9a3-203ENSMUST00000132527 Plppr3Q7TPB0 716 aa26.04■■□□□ 1.76
Col9a3-203ENSMUST00000132527 Kdm5dQ62240 1548 aa25.99■■□□□ 1.75
Col9a3-203ENSMUST00000132527 Rtl5Q5DTT4 599 aa25.94■■□□□ 1.74
Col9a3-203ENSMUST00000132527 Nolc1E9Q5C9 702 aaKnown RBP25.93■■□□□ 1.74
Col9a3-203ENSMUST00000132527 Golga3P55937 1487 aa25.91■■□□□ 1.74
Col9a3-203ENSMUST00000132527 Znf710Q3U288 666 aa25.88■■□□□ 1.73
Col9a3-203ENSMUST00000132527 Ttbk1Q6PCN3 1308 aa25.8■■□□□ 1.72
Col9a3-203ENSMUST00000132527 Crybg2B7ZCC2 1516 aa25.77■■□□□ 1.72
Col9a3-203ENSMUST00000132527 Brd4Q9ESU6 1400 aaKnown RBP25.7■■□□□ 1.71
Col9a3-203ENSMUST00000132527 Hdac5Q9Z2V6 1113 aa25.7■■□□□ 1.71
Col9a3-203ENSMUST00000132527 Pelp1Q9DBD5 1123 aaKnown RBP25.7■■□□□ 1.7
Col9a3-203ENSMUST00000132527 Supt16hQ920B9 1047 aa25.69■■□□□ 1.7
Col9a3-203ENSMUST00000132527 Calr4Q3TQS0 420 aa25.69■■□□□ 1.7
Col9a3-203ENSMUST00000132527 Myt1lP97500 1187 aa25.64■■□□□ 1.7
Col9a3-203ENSMUST00000132527 Eid3Q3V124 375 aa25.64■■□□□ 1.7
Col9a3-203ENSMUST00000132527 Ncapd3Q6ZQK0 1506 aa25.6■■□□□ 1.69
Col9a3-203ENSMUST00000132527 Plekhg3Q4VAC9 1341 aa25.59■■□□□ 1.69
Col9a3-203ENSMUST00000132527 Rapgef2Q8CHG7 1496 aa25.59■■□□□ 1.69
Col9a3-203ENSMUST00000132527 Stra8P70278 393 aa25.58■■□□□ 1.69
Col9a3-203ENSMUST00000132527 CatipB9EKE5 520 aa25.57■■□□□ 1.68
Col9a3-203ENSMUST00000132527 Rpap1Q80TE0 1409 aa25.57■■□□□ 1.68
Col9a3-203ENSMUST00000132527 NacadQ5SWP3 1504 aa25.54■■□□□ 1.68
Col9a3-203ENSMUST00000132527 Esf1Q3V1V3 845 aaKnown RBP25.47■■□□□ 1.67
Col9a3-203ENSMUST00000132527 Cecr2E9Q2Z1 1453 aa25.43■■□□□ 1.66
Col9a3-203ENSMUST00000132527 Cep162Q6ZQ06 1403 aa25.43■■□□□ 1.66
Col9a3-203ENSMUST00000132527 Ppp4r2Q0VGB7 417 aa25.42■■□□□ 1.66
Col9a3-203ENSMUST00000132527 Clip1Q922J3 1391 aa25.38■■□□□ 1.65
Col9a3-203ENSMUST00000132527 Synj1Q8CHC4 1574 aa25.38■■□□□ 1.65
Col9a3-203ENSMUST00000132527 Upf2A2AT37 1269 aaKnown RBP25.35■■□□□ 1.65
Col9a3-203ENSMUST00000132527 Il27Q8K3I6 234 aa25.31■■□□□ 1.64
Col9a3-203ENSMUST00000132527 Pak3Q61036 559 aa25.31■■□□□ 1.64
Col9a3-203ENSMUST00000132527 Wdr43Q6ZQL4 677 aaKnown RBP25.31■■□□□ 1.64
Col9a3-203ENSMUST00000132527 Washc2Q6PGL7 1334 aa25.28■■□□□ 1.64
Col9a3-203ENSMUST00000132527 Top2bQ64511 1612 aa25.28■■□□□ 1.64
Col9a3-203ENSMUST00000132527 Gtf3c3Q3TMP1 882 aa25.25■■□□□ 1.63
Col9a3-203ENSMUST00000132527 Fgd1P52734 960 aa25.25■■□□□ 1.63
Col9a3-203ENSMUST00000132527 Kdm5bQ80Y84 1544 aa25.25■■□□□ 1.63
Col9a3-203ENSMUST00000132527 Ccdc27Q3V036 639 aa25.22■■□□□ 1.63
Col9a3-203ENSMUST00000132527 NclP09405 707 aaKnown RBP25.22■■□□□ 1.63
Col9a3-203ENSMUST00000132527 Liat1Q810M6 228 aa25.2■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 9.9 ms