RNA–Protein interactions for RNA: ENSMUST00000120238.1

Trim24-202, Transcript of Transcription intermediary factor 1-alpha, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim24, Length 3,258 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim24-202ENSMUST00000120238 Gm35339A0A140LHH9 1649 aa12.29□□□□□ -0.44
Trim24-202ENSMUST00000120238 NischQ80TM9 1593 aa11.4□□□□□ -0.59
Trim24-202ENSMUST00000120238 Abcc9P70170 1546 aa11.32□□□□□ -0.6
Trim24-202ENSMUST00000120238 Abcc8B2RUS7 1588 aa11.12□□□□□ -0.63
Trim24-202ENSMUST00000120238 Ccdc180J3QNE4 1664 aa10.84□□□□□ -0.67
Trim24-202ENSMUST00000120238 Dcaf1Q80TR8 1506 aa10.77□□□□□ -0.69
Trim24-202ENSMUST00000120238 Rpgrip1Q9EPQ2 1331 aa10.76□□□□□ -0.69
Trim24-202ENSMUST00000120238 ScribQ80U72 1612 aa10.63□□□□□ -0.71
Trim24-202ENSMUST00000120238 Rhox8Q6VSS7 320 aa10.52□□□□□ -0.72
Trim24-202ENSMUST00000120238 Crybg2B7ZCC2 1516 aa10.3□□□□□ -0.76
Trim24-202ENSMUST00000120238 NacadQ5SWP3 1504 aa10.26□□□□□ -0.77
Trim24-202ENSMUST00000120238 Rtl1Q7M732 1744 aa10.24□□□□□ -0.77
Trim24-202ENSMUST00000120238 Mapk8ip2Q9ERE9 830 aa10.2□□□□□ -0.78
Trim24-202ENSMUST00000120238 Kdm5dQ62240 1548 aa10.17□□□□□ -0.78
Trim24-202ENSMUST00000120238 Acin1Q9JIX8 1338 aaKnown RBP10.15□□□□□ -0.78
Trim24-202ENSMUST00000120238 Pcgf6Q99NA9 353 aa10.09□□□□□ -0.79
Trim24-202ENSMUST00000120238 Sycp2Q9CUU3 1500 aa10.06□□□□□ -0.8
Trim24-202ENSMUST00000120238 Las1lA2BE28 776 aaKnown RBP9.99□□□□□ -0.81
Trim24-202ENSMUST00000120238 Baz1aO88379 1555 aa9.99□□□□□ -0.81
Trim24-202ENSMUST00000120238 Myt1Q8CFC2 1127 aa9.95□□□□□ -0.82
Trim24-202ENSMUST00000120238 Rb1cc1Q9ESK9 1588 aa9.95□□□□□ -0.82
Trim24-202ENSMUST00000120238 BicraF8VPZ9 1578 aa9.88□□□□□ -0.83
Trim24-202ENSMUST00000120238 Baz1bQ9Z277 1479 aa9.81□□□□□ -0.84
Trim24-202ENSMUST00000120238 Smarca2Q6DIC0 1577 aa9.81□□□□□ -0.84
Trim24-202ENSMUST00000120238 CenpbP27790 599 aa9.8□□□□□ -0.84
Trim24-202ENSMUST00000120238 Ccdc136Q3TVA9 1136 aa9.74□□□□□ -0.85
Trim24-202ENSMUST00000120238 Zcchc6Q5BLK4 1491 aaKnown RBP9.72□□□□□ -0.85
Trim24-202ENSMUST00000120238 Neurod1Q60867 357 aa9.72□□□□□ -0.85
Trim24-202ENSMUST00000120238 DiexfQ8BTT6 772 aaKnown RBP9.72□□□□□ -0.85
Trim24-202ENSMUST00000120238 Chic1Q8CBW7 227 aa9.67□□□□□ -0.86
Trim24-202ENSMUST00000120238 Trim41Q5NCC3 630 aa9.65□□□□□ -0.86
Trim24-202ENSMUST00000120238 Supt5hO55201 1082 aaKnown RBP9.65□□□□□ -0.86
Trim24-202ENSMUST00000120238 Ehmt2Q9Z148 1263 aaKnown RBP9.6□□□□□ -0.87
Trim24-202ENSMUST00000120238 1700123L14RikQ3V2K7 440 aa9.57□□□□□ -0.88
Trim24-202ENSMUST00000120238 Thoc2B1AZI6 1594 aaKnown RBP9.57□□□□□ -0.88
Trim24-202ENSMUST00000120238 HrcG5E8J6 738 aa9.52□□□□□ -0.89
Trim24-202ENSMUST00000120238 Smarca4Q3TKT4 1613 aaKnown RBP9.52□□□□□ -0.89
Trim24-202ENSMUST00000120238 Anks4bQ8K3X6 423 aa9.48□□□□□ -0.89
Trim24-202ENSMUST00000120238 Cttnbp2B9EJA2 1648 aa9.48□□□□□ -0.89
Trim24-202ENSMUST00000120238 Bcl11aQ9QYE3 773 aa9.47□□□□□ -0.89
Trim24-202ENSMUST00000120238 Cngb1E1AZ71 1325 aa9.47□□□□□ -0.89
Trim24-202ENSMUST00000120238 Aplp2Q06335 707 aa9.45□□□□□ -0.9
Trim24-202ENSMUST00000120238 Pds5bQ4VA53 1446 aaKnown RBP9.42□□□□□ -0.9
Trim24-202ENSMUST00000120238 Atad2bE9Q166 1460 aaKnown RBP9.41□□□□□ -0.9
Trim24-202ENSMUST00000120238 Csrnp3P59055 597 aa9.41□□□□□ -0.9
Trim24-202ENSMUST00000120238 Unc13aQ4KUS2 1712 aa9.4□□□□□ -0.9
Trim24-202ENSMUST00000120238 Fam135aQ6NS59 1506 aa9.38□□□□□ -0.91
Trim24-202ENSMUST00000120238 Gpatch8A2A6A1 1505 aa9.35□□□□□ -0.91
Trim24-202ENSMUST00000120238 Iqgap2Q3UQ44 1575 aa9.34□□□□□ -0.91
Trim24-202ENSMUST00000120238 Wdr62Q3U3T8 1523 aa9.34□□□□□ -0.92
Trim24-202ENSMUST00000120238 Brd4Q9ESU6 1400 aaKnown RBP9.32□□□□□ -0.92
Trim24-202ENSMUST00000120238 Top2bQ64511 1612 aa9.32□□□□□ -0.92
Trim24-202ENSMUST00000120238 Amer1Q7TS75 1132 aa9.31□□□□□ -0.92
Trim24-202ENSMUST00000120238 TnnQ80Z71 1560 aa9.3□□□□□ -0.92
Trim24-202ENSMUST00000120238 Cecr2E9Q2Z1 1453 aa9.29□□□□□ -0.92
Trim24-202ENSMUST00000120238 Esf1Q3V1V3 845 aaKnown RBP9.27□□□□□ -0.93
Trim24-202ENSMUST00000120238 Zeb1Q64318 1117 aa9.27□□□□□ -0.93
Trim24-202ENSMUST00000120238 NefmP08553 848 aa9.25□□□□□ -0.93
Trim24-202ENSMUST00000120238 Cep164Q5DU05 1446 aa9.24□□□□□ -0.93
Trim24-202ENSMUST00000120238 Sall2Q9QX96 1004 aa9.2□□□□□ -0.94
Trim24-202ENSMUST00000120238 Synj1Q8CHC4 1574 aa9.2□□□□□ -0.94
Trim24-202ENSMUST00000120238 CftrP26361 1476 aa9.19□□□□□ -0.94
Trim24-202ENSMUST00000120238 Gab3Q8BSM5 595 aa9.19□□□□□ -0.94
Trim24-202ENSMUST00000120238 Cdk11bP24788 784 aaKnown RBP9.18□□□□□ -0.94
Trim24-202ENSMUST00000120238 Golga3P55937 1487 aa9.18□□□□□ -0.94
Trim24-202ENSMUST00000120238 Lamc3Q9R0B6 1581 aa9.16□□□□□ -0.94
Trim24-202ENSMUST00000120238 PrkcshO08795 521 aa9.15□□□□□ -0.94
Trim24-202ENSMUST00000120238 Rsf1E9PWW9 1441 aaKnown RBP9.15□□□□□ -0.94
Trim24-202ENSMUST00000120238 Frmpd1A2AKB4 1549 aa9.13□□□□□ -0.95
Trim24-202ENSMUST00000120238 Nop58Q6DFW4 536 aaKnown RBP9.11□□□□□ -0.95
Trim24-202ENSMUST00000120238 Ccdc88bQ4QRL3 1481 aa9.1□□□□□ -0.95
Trim24-202ENSMUST00000120238 Ercc6F8VPZ5 1481 aa9.09□□□□□ -0.95
Trim24-202ENSMUST00000120238 Rtl5Q5DTT4 599 aa9.06□□□□□ -0.96
Trim24-202ENSMUST00000120238 Cc2d2aQ8CFW7 1633 aa9.05□□□□□ -0.96
Trim24-202ENSMUST00000120238 Fam71e1A1L3C1 212 aa9.04□□□□□ -0.96
Trim24-202ENSMUST00000120238 Gm38655A0A286YDK6 273 aa9.04□□□□□ -0.96
Trim24-202ENSMUST00000120238 Wdr66E9Q743 1299 aa9.01□□□□□ -0.97
Trim24-202ENSMUST00000120238 Pelp1Q9DBD5 1123 aaKnown RBP9□□□□□ -0.97
Trim24-202ENSMUST00000120238 ClspnQ80YR7 1315 aa8.99□□□□□ -0.97
Trim24-202ENSMUST00000120238 Pbrm1Q8BSQ9 1634 aaKnown RBP8.98□□□□□ -0.97
Trim24-202ENSMUST00000120238 Tnnt3Q9QZ47 272 aa8.98□□□□□ -0.97
Trim24-202ENSMUST00000120238 Fmn1Q05860 1466 aa8.94□□□□□ -0.98
Trim24-202ENSMUST00000120238 Mier1Q5UAK0 511 aa8.93□□□□□ -0.98
Trim24-202ENSMUST00000120238 Phldb1Q6PDH0 1371 aaKnown RBP8.93□□□□□ -0.98
Trim24-202ENSMUST00000120238 Ifnlr1Q8CGK5 535 aa8.93□□□□□ -0.98
Trim24-202ENSMUST00000120238 Eif4g1Q6NZJ6 1600 aaKnown RBP8.91□□□□□ -0.98
Trim24-202ENSMUST00000120238 Npm2Q80W85 207 aa8.91□□□□□ -0.98
Trim24-202ENSMUST00000120238 Myt1lP97500 1187 aa8.9□□□□□ -0.99
Trim24-202ENSMUST00000120238 Top2aQ01320 1528 aaKnown RBP8.89□□□□□ -0.99
Trim24-202ENSMUST00000120238 Anp32aO35381 247 aa8.89□□□□□ -0.99
Trim24-202ENSMUST00000120238 Camsap1A2AHC3 1581 aa8.86□□□□□ -0.99
Trim24-202ENSMUST00000120238 Il27Q8K3I6 234 aa8.84□□□□□ -0.99
Trim24-202ENSMUST00000120238 Rapgef2Q8CHG7 1496 aa8.84□□□□□ -0.99
Trim24-202ENSMUST00000120238 Aebp2Q9Z248 504 aaKnown RBP8.83□□□□□ -1
Trim24-202ENSMUST00000120238 Hdac5Q9Z2V6 1113 aa8.83□□□□□ -1
Trim24-202ENSMUST00000120238 Cep162Q6ZQ06 1403 aa8.8□□□□□ -1
Trim24-202ENSMUST00000120238 NrdcQ8BHG1 1161 aa8.8□□□□□ -1
Trim24-202ENSMUST00000120238 Mrc2Q64449 1479 aa8.8□□□□□ -1
Trim24-202ENSMUST00000120238 Pknox2Q8BG99 474 aa8.79□□□□□ -1
Trim24-202ENSMUST00000120238 UbtfP25976 765 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 72.5 ms