RNA–Protein interactions for RNA: ENSMUST00000119579.2

Med28-203, Transcript of Mediator of RNA polymerase II transcription subunit 28, mousemouse

TSL 3 BASIC

Gene Med28, Length 636 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Med28-203ENSMUST00000119579 Gm35339A0A140LHH9 1649 aa31.19■■■□□ 2.58
Med28-203ENSMUST00000119579 NischQ80TM9 1593 aa30.7■■■□□ 2.5
Med28-203ENSMUST00000119579 Abcc8B2RUS7 1588 aa29.84■■■□□ 2.37
Med28-203ENSMUST00000119579 Abcc9P70170 1546 aa29.64■■■□□ 2.34
Med28-203ENSMUST00000119579 ScribQ80U72 1612 aa28.94■■■□□ 2.22
Med28-203ENSMUST00000119579 NacadQ5SWP3 1504 aa28.07■■■□□ 2.08
Med28-203ENSMUST00000119579 Kdm5dQ62240 1548 aa27.92■■■□□ 2.06
Med28-203ENSMUST00000119579 Sycp2Q9CUU3 1500 aa27.54■■■□□ 2
Med28-203ENSMUST00000119579 Dcaf1Q80TR8 1506 aa27.31■■□□□ 1.96
Med28-203ENSMUST00000119579 Dnajc5bQ9CQ94 199 aa27.27■■□□□ 1.96
Med28-203ENSMUST00000119579 BicraF8VPZ9 1578 aa27.2■■□□□ 1.94
Med28-203ENSMUST00000119579 Rb1cc1Q9ESK9 1588 aa26.65■■□□□ 1.86
Med28-203ENSMUST00000119579 Pds5bQ4VA53 1446 aaKnown RBP26.6■■□□□ 1.85
Med28-203ENSMUST00000119579 Thoc2B1AZI6 1594 aaKnown RBP26.43■■□□□ 1.82
Med28-203ENSMUST00000119579 Crybg2B7ZCC2 1516 aa26.36■■□□□ 1.81
Med28-203ENSMUST00000119579 Baz1aO88379 1555 aa26.28■■□□□ 1.8
Med28-203ENSMUST00000119579 Atad2bE9Q166 1460 aaKnown RBP26.25■■□□□ 1.79
Med28-203ENSMUST00000119579 Rhox8Q6VSS7 320 aa26.16■■□□□ 1.78
Med28-203ENSMUST00000119579 Ccdc180J3QNE4 1664 aa26.1■■□□□ 1.77
Med28-203ENSMUST00000119579 Zcchc6Q5BLK4 1491 aaKnown RBP26.01■■□□□ 1.75
Med28-203ENSMUST00000119579 Cc2d2aQ8CFW7 1633 aa25.99■■□□□ 1.75
Med28-203ENSMUST00000119579 Ercc6F8VPZ5 1481 aa25.93■■□□□ 1.74
Med28-203ENSMUST00000119579 Smarca2Q6DIC0 1577 aa25.85■■□□□ 1.73
Med28-203ENSMUST00000119579 Smarca4Q3TKT4 1613 aaKnown RBP25.77■■□□□ 1.72
Med28-203ENSMUST00000119579 Fam135aQ6NS59 1506 aa25.76■■□□□ 1.71
Med28-203ENSMUST00000119579 Iqgap2Q3UQ44 1575 aa25.69■■□□□ 1.7
Med28-203ENSMUST00000119579 Cecr2E9Q2Z1 1453 aa25.66■■□□□ 1.7
Med28-203ENSMUST00000119579 Phldb1Q6PDH0 1371 aaKnown RBP25.6■■□□□ 1.69
Med28-203ENSMUST00000119579 Frmpd1A2AKB4 1549 aa25.58■■□□□ 1.69
Med28-203ENSMUST00000119579 Wdr62Q3U3T8 1523 aa25.57■■□□□ 1.68
Med28-203ENSMUST00000119579 Baz1bQ9Z277 1479 aa25.51■■□□□ 1.67
Med28-203ENSMUST00000119579 Ubl4bQ9CQ84 188 aa25.44■■□□□ 1.66
Med28-203ENSMUST00000119579 Mrc2Q64449 1479 aa25.2■■□□□ 1.62
Med28-203ENSMUST00000119579 Dnajc5P60904 198 aa25.13■■□□□ 1.61
Med28-203ENSMUST00000119579 Unc13aQ4KUS2 1712 aa25■■□□□ 1.59
Med28-203ENSMUST00000119579 CftrP26361 1476 aa24.99■■□□□ 1.59
Med28-203ENSMUST00000119579 Trim41Q5NCC3 630 aa24.89■■□□□ 1.58
Med28-203ENSMUST00000119579 Cttnbp2B9EJA2 1648 aa24.83■■□□□ 1.56
Med28-203ENSMUST00000119579 Synj1Q8CHC4 1574 aa24.81■■□□□ 1.56
Med28-203ENSMUST00000119579 Brd4Q9ESU6 1400 aaKnown RBP24.79■■□□□ 1.56
Med28-203ENSMUST00000119579 Cux2P70298 1426 aa24.63■■□□□ 1.53
Med28-203ENSMUST00000119579 Ccdc136Q3TVA9 1136 aa24.62■■□□□ 1.53
Med28-203ENSMUST00000119579 Rsf1E9PWW9 1441 aaKnown RBP24.59■■□□□ 1.53
Med28-203ENSMUST00000119579 Lrriq1Q0P5X1 1673 aa24.58■■□□□ 1.53
Med28-203ENSMUST00000119579 Esf1Q3V1V3 845 aaKnown RBP24.57■■□□□ 1.52
Med28-203ENSMUST00000119579 Kif15Q6P9L6 1387 aa24.54■■□□□ 1.52
Med28-203ENSMUST00000119579 Rtl1Q7M732 1744 aa24.41■■□□□ 1.5
Med28-203ENSMUST00000119579 Npm1Q61937 292 aaKnown RBP24.41■■□□□ 1.5
Med28-203ENSMUST00000119579 Kif21aQ9QXL2 1672 aa24.38■■□□□ 1.49
Med28-203ENSMUST00000119579 Lamc3Q9R0B6 1581 aa24.31■■□□□ 1.48
Med28-203ENSMUST00000119579 Shroom2A2ALU4 1481 aa24.3■■□□□ 1.48
Med28-203ENSMUST00000119579 Eif4g3Q80XI3 1579 aaKnown RBP24.23■■□□□ 1.47
Med28-203ENSMUST00000119579 Cep164Q5DU05 1446 aa24.22■■□□□ 1.47
Med28-203ENSMUST00000119579 Urb2E9Q7L1 1524 aaKnown RBP24.11■■□□□ 1.45
Med28-203ENSMUST00000119579 Dhx29Q6PGC1 1365 aaKnown RBP24.09■■□□□ 1.45
Med28-203ENSMUST00000119579 Plb1Q3TTY0 1478 aa24.08■■□□□ 1.45
Med28-203ENSMUST00000119579 Col17a1Q07563 1470 aa24.07■■□□□ 1.44
Med28-203ENSMUST00000119579 Pabpn1Q8CCS6 302 aaKnown RBP24.07■■□□□ 1.44
Med28-203ENSMUST00000119579 Il27Q8K3I6 234 aa24.01■■□□□ 1.43
Med28-203ENSMUST00000119579 LrpprcQ6PB66 1392 aaKnown RBP24■■□□□ 1.43
Med28-203ENSMUST00000119579 Ccdc18Q640L5 1455 aa23.98■■□□□ 1.43
Med28-203ENSMUST00000119579 Top2bQ64511 1612 aa23.86■■□□□ 1.41
Med28-203ENSMUST00000119579 TnnQ80Z71 1560 aa23.85■■□□□ 1.41
Med28-203ENSMUST00000119579 Crocc2F6XLV1 1638 aa23.84■■□□□ 1.41
Med28-203ENSMUST00000119579 Ift140E9PY46 1464 aa23.82■■□□□ 1.4
Med28-203ENSMUST00000119579 Pelp1Q9DBD5 1123 aaKnown RBP23.8■■□□□ 1.4
Med28-203ENSMUST00000119579 Camsap1A2AHC3 1581 aa23.78■■□□□ 1.4
Med28-203ENSMUST00000119579 PogzQ8BZH4 1409 aaKnown RBP23.78■■□□□ 1.4
Med28-203ENSMUST00000119579 Rusc2Q80U22 1514 aa23.75■■□□□ 1.39
Med28-203ENSMUST00000119579 Golga3P55937 1487 aa23.75■■□□□ 1.39
Med28-203ENSMUST00000119579 Cngb1E1AZ71 1325 aa23.67■■□□□ 1.38
Med28-203ENSMUST00000119579 Duox2A2AQ99 1517 aa23.65■■□□□ 1.38
Med28-203ENSMUST00000119579 Zcchc11B2RX14 1644 aaKnown RBP23.65■■□□□ 1.38
Med28-203ENSMUST00000119579 Disp1Q3TDN0 1521 aa23.63■■□□□ 1.37
Med28-203ENSMUST00000119579 Fmn1Q05860 1466 aa23.56■■□□□ 1.36
Med28-203ENSMUST00000119579 Cc2d2bA0A286YDU8 1405 aa23.52■■□□□ 1.36
Med28-203ENSMUST00000119579 Nup160Q9Z0W3 1402 aaKnown RBP23.51■■□□□ 1.35
Med28-203ENSMUST00000119579 Grin2bQ01097 1482 aa23.49■■□□□ 1.35
Med28-203ENSMUST00000119579 Efcab5A0JP43 1406 aa23.43■■□□□ 1.34
Med28-203ENSMUST00000119579 Pcdh10E9PXQ7 1057 aa23.43■■□□□ 1.34
Med28-203ENSMUST00000119579 Adgrl3Q80TS3 1537 aa23.38■■□□□ 1.33
Med28-203ENSMUST00000119579 Samd9lQ69Z37 1561 aa23.36■■□□□ 1.33
Med28-203ENSMUST00000119579 Gm156Q58A37 223 aa23.36■■□□□ 1.33
Med28-203ENSMUST00000119579 Fgd6Q69ZL1 1399 aa23.36■■□□□ 1.33
Med28-203ENSMUST00000119579 PtprkP35822 1457 aa23.35■■□□□ 1.33
Med28-203ENSMUST00000119579 Pbrm1Q8BSQ9 1634 aaKnown RBP23.33■■□□□ 1.33
Med28-203ENSMUST00000119579 Rad54l2Q99NG0 1466 aa23.3■■□□□ 1.32
Med28-203ENSMUST00000119579 Arhgef5E9Q7D5 1581 aa23.29■■□□□ 1.32
Med28-203ENSMUST00000119579 AqrQ8CFQ3 1481 aaKnown RBP23.28■■□□□ 1.32
Med28-203ENSMUST00000119579 Ttbk1Q6PCN3 1308 aa23.27■■□□□ 1.32
Med28-203ENSMUST00000119579 Grin2aP35436 1464 aa23.26■■□□□ 1.31
Med28-203ENSMUST00000119579 Gapvd1Q6PAR5 1458 aa23.26■■□□□ 1.31
Med28-203ENSMUST00000119579 Setd1bQ8CFT2 1985 aa23.26■■□□□ 1.31
Med28-203ENSMUST00000119579 Magi3Q9EQJ9 1476 aa23.24■■□□□ 1.31
Med28-203ENSMUST00000119579 Cep170Q6A065 1588 aa23.23■■□□□ 1.31
Med28-203ENSMUST00000119579 PtprtQ99M80 1454 aa23.22■■□□□ 1.31
Med28-203ENSMUST00000119579 NrkQ9R0G8 1455 aa23.14■■□□□ 1.29
Med28-203ENSMUST00000119579 Ythdc2B2RR83 1445 aaKnown RBP23.11■■□□□ 1.29
Med28-203ENSMUST00000119579 AknaQ80VW7 1404 aa23.11■■□□□ 1.29
Med28-203ENSMUST00000119579 CadpsQ80TJ1 1355 aa23.1■■□□□ 1.29
Retrieved 100 of 22,080 RNA–protein pairs in 100.6 ms