RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 NischQ80TM9 1593 aa46.78■■■■■ 5.08
Ccdc9-202ENSMUST00000118976 Gm35339A0A140LHH9 1649 aa45.59■■■■■ 4.89
Ccdc9-202ENSMUST00000118976 Abcc9P70170 1546 aa45.52■■■■■ 4.88
Ccdc9-202ENSMUST00000118976 Rtl1Q7M732 1744 aa44.79■■■■■ 4.76
Ccdc9-202ENSMUST00000118976 Rhox8Q6VSS7 320 aa44.29■■■■■ 4.68
Ccdc9-202ENSMUST00000118976 Ccdc180J3QNE4 1664 aa44.19■■■■■ 4.66
Ccdc9-202ENSMUST00000118976 Abcc8B2RUS7 1588 aa44.16■■■■■ 4.66
Ccdc9-202ENSMUST00000118976 Rpgrip1Q9EPQ2 1331 aa43.84■■■■■ 4.61
Ccdc9-202ENSMUST00000118976 Zcchc6Q5BLK4 1491 aaKnown RBP42.87■■■■■ 4.45
Ccdc9-202ENSMUST00000118976 Acin1Q9JIX8 1338 aaKnown RBP42.63■■■■■ 4.42
Ccdc9-202ENSMUST00000118976 HrcG5E8J6 738 aa41.98■■■■■ 4.31
Ccdc9-202ENSMUST00000118976 Dcaf1Q80TR8 1506 aa41.93■■■■■ 4.3
Ccdc9-202ENSMUST00000118976 Ehmt2Q9Z148 1263 aaKnown RBP41.59■■■■■ 4.25
Ccdc9-202ENSMUST00000118976 Pcgf6Q99NA9 353 aa41.44■■■■■ 4.22
Ccdc9-202ENSMUST00000118976 ScribQ80U72 1612 aa41.17■■■■■ 4.18
Ccdc9-202ENSMUST00000118976 Rb1cc1Q9ESK9 1588 aa41.06■■■■■ 4.16
Ccdc9-202ENSMUST00000118976 Ccdc136Q3TVA9 1136 aa40.95■■■■■ 4.15
Ccdc9-202ENSMUST00000118976 Trim41Q5NCC3 630 aa40.67■■■■■ 4.1
Ccdc9-202ENSMUST00000118976 Baz1aO88379 1555 aa40.65■■■■■ 4.1
Ccdc9-202ENSMUST00000118976 Supt5hO55201 1082 aaKnown RBP40.41■■■■■ 4.06
Ccdc9-202ENSMUST00000118976 Cep164Q5DU05 1446 aa40.36■■■■■ 4.05
Ccdc9-202ENSMUST00000118976 Kdm5dQ62240 1548 aa40.21■■■■■ 4.03
Ccdc9-202ENSMUST00000118976 NacadQ5SWP3 1504 aa40.1■■■■■ 4.01
Ccdc9-202ENSMUST00000118976 Neurod1Q60867 357 aa39.84■■■■□ 3.97
Ccdc9-202ENSMUST00000118976 Smarca2Q6DIC0 1577 aa39.83■■■■□ 3.97
Ccdc9-202ENSMUST00000118976 Crybg2B7ZCC2 1516 aa39.73■■■■□ 3.95
Ccdc9-202ENSMUST00000118976 NefmP08553 848 aa39.57■■■■□ 3.92
Ccdc9-202ENSMUST00000118976 Zeb1Q64318 1117 aa39.4■■■■□ 3.9
Ccdc9-202ENSMUST00000118976 Rsf1E9PWW9 1441 aaKnown RBP39.4■■■■□ 3.9
Ccdc9-202ENSMUST00000118976 Las1lA2BE28 776 aaKnown RBP39.35■■■■□ 3.89
Ccdc9-202ENSMUST00000118976 Chic1Q8CBW7 227 aa39.31■■■■□ 3.88
Ccdc9-202ENSMUST00000118976 Mier1Q5UAK0 511 aa39.26■■■■□ 3.88
Ccdc9-202ENSMUST00000118976 Sycp2Q9CUU3 1500 aa39.24■■■■□ 3.87
Ccdc9-202ENSMUST00000118976 Cngb1E1AZ71 1325 aa39.2■■■■□ 3.87
Ccdc9-202ENSMUST00000118976 Gab3Q8BSM5 595 aa39.14■■■■□ 3.86
Ccdc9-202ENSMUST00000118976 Sall2Q9QX96 1004 aa39.13■■■■□ 3.85
Ccdc9-202ENSMUST00000118976 Ccdc88bQ4QRL3 1481 aa38.97■■■■□ 3.83
Ccdc9-202ENSMUST00000118976 Anks4bQ8K3X6 423 aa38.94■■■■□ 3.82
Ccdc9-202ENSMUST00000118976 Brd4Q9ESU6 1400 aaKnown RBP38.93■■■■□ 3.82
Ccdc9-202ENSMUST00000118976 Golga3P55937 1487 aa38.88■■■■□ 3.81
Ccdc9-202ENSMUST00000118976 1700123L14RikQ3V2K7 440 aa38.67■■■■□ 3.78
Ccdc9-202ENSMUST00000118976 Cecr2E9Q2Z1 1453 aa38.54■■■■□ 3.76
Ccdc9-202ENSMUST00000118976 Csrnp3P59055 597 aa38.5■■■■□ 3.75
Ccdc9-202ENSMUST00000118976 Synj1Q8CHC4 1574 aa38.48■■■■□ 3.75
Ccdc9-202ENSMUST00000118976 BicraF8VPZ9 1578 aa38.41■■■■□ 3.74
Ccdc9-202ENSMUST00000118976 Aebp2Q9Z248 504 aaKnown RBP38.33■■■■□ 3.73
Ccdc9-202ENSMUST00000118976 Top2bQ64511 1612 aa38.31■■■■□ 3.72
Ccdc9-202ENSMUST00000118976 Wdr66E9Q743 1299 aa38.29■■■■□ 3.72
Ccdc9-202ENSMUST00000118976 ClspnQ80YR7 1315 aa38.26■■■■□ 3.72
Ccdc9-202ENSMUST00000118976 Cdk11bP24788 784 aaKnown RBP38.25■■■■□ 3.71
Ccdc9-202ENSMUST00000118976 UbtfP25976 765 aaKnown RBP38.19■■■■□ 3.7
Ccdc9-202ENSMUST00000118976 Aplp2Q06335 707 aa38.19■■■■□ 3.7
Ccdc9-202ENSMUST00000118976 Nop58Q6DFW4 536 aaKnown RBP38.15■■■■□ 3.7
Ccdc9-202ENSMUST00000118976 CftrP26361 1476 aa38.13■■■■□ 3.69
Ccdc9-202ENSMUST00000118976 Rapgef2Q8CHG7 1496 aa38.1■■■■□ 3.69
Ccdc9-202ENSMUST00000118976 Myt1Q8CFC2 1127 aa38.04■■■■□ 3.68
Ccdc9-202ENSMUST00000118976 Esf1Q3V1V3 845 aaKnown RBP38.02■■■■□ 3.68
Ccdc9-202ENSMUST00000118976 CenpbP27790 599 aa37.88■■■■□ 3.65
Ccdc9-202ENSMUST00000118976 Cttnbp2B9EJA2 1648 aa37.86■■■■□ 3.65
Ccdc9-202ENSMUST00000118976 Cc2d2aQ8CFW7 1633 aa37.85■■■■□ 3.65
Ccdc9-202ENSMUST00000118976 TonslQ6NZL6 1363 aa37.8■■■■□ 3.64
Ccdc9-202ENSMUST00000118976 Cep162Q6ZQ06 1403 aa37.73■■■■□ 3.63
Ccdc9-202ENSMUST00000118976 Top2aQ01320 1528 aaKnown RBP37.69■■■■□ 3.62
Ccdc9-202ENSMUST00000118976 Fmn1Q05860 1466 aa37.65■■■■□ 3.62
Ccdc9-202ENSMUST00000118976 Ppargc1bQ8VHJ7 1014 aa37.63■■■■□ 3.61
Ccdc9-202ENSMUST00000118976 Ncapd3Q6ZQK0 1506 aa37.46■■■■□ 3.59
Ccdc9-202ENSMUST00000118976 Myt1lP97500 1187 aa37.45■■■■□ 3.59
Ccdc9-202ENSMUST00000118976 Smarca4Q3TKT4 1613 aaKnown RBP37.35■■■■□ 3.57
Ccdc9-202ENSMUST00000118976 Clip1Q922J3 1391 aa37.34■■■■□ 3.57
Ccdc9-202ENSMUST00000118976 Eif4g1Q6NZJ6 1600 aaKnown RBP37.31■■■■□ 3.56
Ccdc9-202ENSMUST00000118976 Gm38655A0A286YDK6 273 aa37.28■■■■□ 3.56
Ccdc9-202ENSMUST00000118976 Plekhg3Q4VAC9 1341 aa37.2■■■■□ 3.55
Ccdc9-202ENSMUST00000118976 Npm2Q80W85 207 aa37.14■■■■□ 3.54
Ccdc9-202ENSMUST00000118976 Tnnt3Q9QZ47 272 aa37.08■■■■□ 3.53
Ccdc9-202ENSMUST00000118976 Atad2bE9Q166 1460 aaKnown RBP36.99■■■■□ 3.51
Ccdc9-202ENSMUST00000118976 Kdm5bQ80Y84 1544 aa36.99■■■■□ 3.51
Ccdc9-202ENSMUST00000118976 Pds5bQ4VA53 1446 aaKnown RBP36.98■■■■□ 3.51
Ccdc9-202ENSMUST00000118976 Hnrnpul2Q00PI9 745 aaKnown RBP36.93■■■■□ 3.5
Ccdc9-202ENSMUST00000118976 Iqgap2Q3UQ44 1575 aa36.91■■■■□ 3.5
Ccdc9-202ENSMUST00000118976 Arhgap35Q91YM2 1499 aa36.8■■■■□ 3.48
Ccdc9-202ENSMUST00000118976 Fam71e1A1L3C1 212 aa36.78■■■■□ 3.48
Ccdc9-202ENSMUST00000118976 Arap1Q4LDD4 1452 aa36.78■■■■□ 3.48
Ccdc9-202ENSMUST00000118976 Eea1Q8BL66 1411 aa36.75■■■■□ 3.47
Ccdc9-202ENSMUST00000118976 SafbD3YXK2 937 aaKnown RBP36.74■■■■□ 3.47
Ccdc9-202ENSMUST00000118976 Ccdc18Q640L5 1455 aa36.72■■■■□ 3.47
Ccdc9-202ENSMUST00000118976 Eid3Q3V124 375 aa36.71■■■■□ 3.47
Ccdc9-202ENSMUST00000118976 TnnQ80Z71 1560 aa36.7■■■■□ 3.47
Ccdc9-202ENSMUST00000118976 Arhgef5E9Q7D5 1581 aa36.68■■■■□ 3.46
Ccdc9-202ENSMUST00000118976 TchhA0A0B4J1F9 1599 aa36.64■■■■□ 3.46
Ccdc9-202ENSMUST00000118976 NrkQ9R0G8 1455 aa36.63■■■■□ 3.45
Ccdc9-202ENSMUST00000118976 Mapk8ip2Q9ERE9 830 aa36.58■■■■□ 3.45
Ccdc9-202ENSMUST00000118976 Ap3b1Q9Z1T1 1105 aa36.57■■■■□ 3.44
Ccdc9-202ENSMUST00000118976 Baz1bQ9Z277 1479 aa36.57■■■■□ 3.44
Ccdc9-202ENSMUST00000118976 Rpap1Q80TE0 1409 aa36.54■■■■□ 3.44
Ccdc9-202ENSMUST00000118976 PtprkP35822 1457 aa36.5■■■■□ 3.43
Ccdc9-202ENSMUST00000118976 Znf710Q3U288 666 aa36.49■■■■□ 3.43
Ccdc9-202ENSMUST00000118976 Setd5Q5XJV7 1441 aa36.47■■■■□ 3.43
Ccdc9-202ENSMUST00000118976 Stra8P70278 393 aa36.46■■■■□ 3.43
Ccdc9-202ENSMUST00000118976 Tiam1Q60610 1591 aa36.43■■■■□ 3.42
Ccdc9-202ENSMUST00000118976 Map3k1P53349 1493 aa36.38■■■■□ 3.41
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms