RNA–Protein interactions for RNA: ENSMUST00000115532.1

Rpgr-204, Transcript of X-linked retinitis pigmentosa GTPase regulator, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Rpgr, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpgr-204ENSMUST00000115532 NischQ80TM9 1593 aa17.24■□□□□ 0.35
Rpgr-204ENSMUST00000115532 Abcc9P70170 1546 aa16.66■□□□□ 0.26
Rpgr-204ENSMUST00000115532 Rhox8Q6VSS7 320 aa16.61■□□□□ 0.25
Rpgr-204ENSMUST00000115532 Gm35339A0A140LHH9 1649 aa16.6■□□□□ 0.25
Rpgr-204ENSMUST00000115532 Abcc8B2RUS7 1588 aa16.24■□□□□ 0.19
Rpgr-204ENSMUST00000115532 Rtl1Q7M732 1744 aa16.07■□□□□ 0.16
Rpgr-204ENSMUST00000115532 Ccdc180J3QNE4 1664 aa15.9■□□□□ 0.14
Rpgr-204ENSMUST00000115532 Rpgrip1Q9EPQ2 1331 aa15.55■□□□□ 0.08
Rpgr-204ENSMUST00000115532 Zcchc6Q5BLK4 1491 aaKnown RBP15.43■□□□□ 0.06
Rpgr-204ENSMUST00000115532 Ehmt2Q9Z148 1263 aaKnown RBP15.39■□□□□ 0.05
Rpgr-204ENSMUST00000115532 Ccdc136Q3TVA9 1136 aa15.34■□□□□ 0.05
Rpgr-204ENSMUST00000115532 Acin1Q9JIX8 1338 aaKnown RBP15.26■□□□□ 0.03
Rpgr-204ENSMUST00000115532 HrcG5E8J6 738 aa15.18■□□□□ 0.02
Rpgr-204ENSMUST00000115532 Rb1cc1Q9ESK9 1588 aa15.14■□□□□ 0.01
Rpgr-204ENSMUST00000115532 Dcaf1Q80TR8 1506 aa15.07■□□□□ 0
Rpgr-204ENSMUST00000115532 Trim41Q5NCC3 630 aa15.02■□□□□ -0
Rpgr-204ENSMUST00000115532 ScribQ80U72 1612 aa15.02□□□□□ -0.01
Rpgr-204ENSMUST00000115532 Baz1aO88379 1555 aa14.92□□□□□ -0.02
Rpgr-204ENSMUST00000115532 Kdm5dQ62240 1548 aa14.86□□□□□ -0.03
Rpgr-204ENSMUST00000115532 Pcgf6Q99NA9 353 aa14.79□□□□□ -0.04
Rpgr-204ENSMUST00000115532 NacadQ5SWP3 1504 aa14.69□□□□□ -0.06
Rpgr-204ENSMUST00000115532 Cngb1E1AZ71 1325 aa14.68□□□□□ -0.06
Rpgr-204ENSMUST00000115532 Cep164Q5DU05 1446 aa14.66□□□□□ -0.06
Rpgr-204ENSMUST00000115532 Gab3Q8BSM5 595 aa14.65□□□□□ -0.06
Rpgr-204ENSMUST00000115532 Smarca2Q6DIC0 1577 aa14.56□□□□□ -0.08
Rpgr-204ENSMUST00000115532 Supt5hO55201 1082 aaKnown RBP14.54□□□□□ -0.08
Rpgr-204ENSMUST00000115532 Chic1Q8CBW7 227 aa14.5□□□□□ -0.09
Rpgr-204ENSMUST00000115532 Crybg2B7ZCC2 1516 aa14.46□□□□□ -0.09
Rpgr-204ENSMUST00000115532 Zeb1Q64318 1117 aa14.46□□□□□ -0.09
Rpgr-204ENSMUST00000115532 Rsf1E9PWW9 1441 aaKnown RBP14.43□□□□□ -0.1
Rpgr-204ENSMUST00000115532 Esf1Q3V1V3 845 aaKnown RBP14.37□□□□□ -0.11
Rpgr-204ENSMUST00000115532 Brd4Q9ESU6 1400 aaKnown RBP14.36□□□□□ -0.11
Rpgr-204ENSMUST00000115532 Sycp2Q9CUU3 1500 aa14.34□□□□□ -0.11
Rpgr-204ENSMUST00000115532 NefmP08553 848 aa14.3□□□□□ -0.12
Rpgr-204ENSMUST00000115532 Mier1Q5UAK0 511 aa14.3□□□□□ -0.12
Rpgr-204ENSMUST00000115532 Ccdc88bQ4QRL3 1481 aa14.3□□□□□ -0.12
Rpgr-204ENSMUST00000115532 Golga3P55937 1487 aa14.27□□□□□ -0.13
Rpgr-204ENSMUST00000115532 Cecr2E9Q2Z1 1453 aa14.26□□□□□ -0.13
Rpgr-204ENSMUST00000115532 Neurod1Q60867 357 aa14.2□□□□□ -0.14
Rpgr-204ENSMUST00000115532 Synj1Q8CHC4 1574 aa14.17□□□□□ -0.14
Rpgr-204ENSMUST00000115532 UbtfP25976 765 aaKnown RBP14.16□□□□□ -0.14
Rpgr-204ENSMUST00000115532 Sall2Q9QX96 1004 aa14.12□□□□□ -0.15
Rpgr-204ENSMUST00000115532 Wdr66E9Q743 1299 aa14.1□□□□□ -0.15
Rpgr-204ENSMUST00000115532 Myt1lP97500 1187 aa14.08□□□□□ -0.16
Rpgr-204ENSMUST00000115532 Las1lA2BE28 776 aaKnown RBP14.05□□□□□ -0.16
Rpgr-204ENSMUST00000115532 CftrP26361 1476 aa14.05□□□□□ -0.16
Rpgr-204ENSMUST00000115532 BicraF8VPZ9 1578 aa13.98□□□□□ -0.17
Rpgr-204ENSMUST00000115532 Npm2Q80W85 207 aa13.97□□□□□ -0.17
Rpgr-204ENSMUST00000115532 Top2bQ64511 1612 aa13.94□□□□□ -0.18
Rpgr-204ENSMUST00000115532 Cttnbp2B9EJA2 1648 aa13.92□□□□□ -0.18
Rpgr-204ENSMUST00000115532 Cc2d2aQ8CFW7 1633 aa13.92□□□□□ -0.18
Rpgr-204ENSMUST00000115532 Ppargc1bQ8VHJ7 1014 aa13.92□□□□□ -0.18
Rpgr-204ENSMUST00000115532 Aebp2Q9Z248 504 aaKnown RBP13.9□□□□□ -0.18
Rpgr-204ENSMUST00000115532 Rapgef2Q8CHG7 1496 aa13.86□□□□□ -0.19
Rpgr-204ENSMUST00000115532 Plekhg3Q4VAC9 1341 aa13.83□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Fmn1Q05860 1466 aa13.82□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Cep162Q6ZQ06 1403 aa13.81□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Anks4bQ8K3X6 423 aa13.81□□□□□ -0.2
Rpgr-204ENSMUST00000115532 ClspnQ80YR7 1315 aa13.81□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Smarca4Q3TKT4 1613 aaKnown RBP13.81□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Cdk11bP24788 784 aaKnown RBP13.8□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Nop58Q6DFW4 536 aaKnown RBP13.8□□□□□ -0.2
Rpgr-204ENSMUST00000115532 TonslQ6NZL6 1363 aa13.8□□□□□ -0.2
Rpgr-204ENSMUST00000115532 Csrnp3P59055 597 aa13.77□□□□□ -0.21
Rpgr-204ENSMUST00000115532 Clip1Q922J3 1391 aa13.76□□□□□ -0.21
Rpgr-204ENSMUST00000115532 Top2aQ01320 1528 aaKnown RBP13.76□□□□□ -0.21
Rpgr-204ENSMUST00000115532 1700123L14RikQ3V2K7 440 aa13.69□□□□□ -0.22
Rpgr-204ENSMUST00000115532 Ap3b1Q9Z1T1 1105 aa13.68□□□□□ -0.22
Rpgr-204ENSMUST00000115532 Il27Q8K3I6 234 aa13.66□□□□□ -0.22
Rpgr-204ENSMUST00000115532 Iqgap2Q3UQ44 1575 aa13.62□□□□□ -0.23
Rpgr-204ENSMUST00000115532 Eid3Q3V124 375 aa13.6□□□□□ -0.23
Rpgr-204ENSMUST00000115532 Ncapd3Q6ZQK0 1506 aa13.53□□□□□ -0.24
Rpgr-204ENSMUST00000115532 Gm38655A0A286YDK6 273 aa13.53□□□□□ -0.24
Rpgr-204ENSMUST00000115532 CenpbP27790 599 aa13.51□□□□□ -0.25
Rpgr-204ENSMUST00000115532 Eea1Q8BL66 1411 aa13.51□□□□□ -0.25
Rpgr-204ENSMUST00000115532 Setd5Q5XJV7 1441 aa13.49□□□□□ -0.25
Rpgr-204ENSMUST00000115532 Aplp2Q06335 707 aa13.49□□□□□ -0.25
Rpgr-204ENSMUST00000115532 Atad2bE9Q166 1460 aaKnown RBP13.48□□□□□ -0.25
Rpgr-204ENSMUST00000115532 Arhgap35Q91YM2 1499 aa13.48□□□□□ -0.25
Rpgr-204ENSMUST00000115532 Eif4g1Q6NZJ6 1600 aaKnown RBP13.46□□□□□ -0.25
Rpgr-204ENSMUST00000115532 PtprkP35822 1457 aa13.45□□□□□ -0.26
Rpgr-204ENSMUST00000115532 Fam50aQ9WV03 339 aaKnown RBP13.44□□□□□ -0.26
Rpgr-204ENSMUST00000115532 Arap1Q4LDD4 1452 aa13.44□□□□□ -0.26
Rpgr-204ENSMUST00000115532 Mapk8ip2Q9ERE9 830 aa13.43□□□□□ -0.26
Rpgr-204ENSMUST00000115532 Kif15Q6P9L6 1387 aa13.42□□□□□ -0.26
Rpgr-204ENSMUST00000115532 Pds5bQ4VA53 1446 aaKnown RBP13.4□□□□□ -0.26
Rpgr-204ENSMUST00000115532 Lmod2Q3UHZ5 550 aa13.39□□□□□ -0.27
Rpgr-204ENSMUST00000115532 TnnQ80Z71 1560 aa13.39□□□□□ -0.27
Rpgr-204ENSMUST00000115532 BlmO88700 1416 aa13.38□□□□□ -0.27
Rpgr-204ENSMUST00000115532 Ccdc18Q640L5 1455 aa13.37□□□□□ -0.27
Rpgr-204ENSMUST00000115532 NclP09405 707 aaKnown RBP13.37□□□□□ -0.27
Rpgr-204ENSMUST00000115532 NrkQ9R0G8 1455 aa13.36□□□□□ -0.27
Rpgr-204ENSMUST00000115532 Arhgef5E9Q7D5 1581 aa13.36□□□□□ -0.27
Rpgr-204ENSMUST00000115532 Shroom4Q1W617 1475 aa13.33□□□□□ -0.28
Rpgr-204ENSMUST00000115532 Baz1bQ9Z277 1479 aa13.32□□□□□ -0.28
Rpgr-204ENSMUST00000115532 Frmpd1A2AKB4 1549 aa13.32□□□□□ -0.28
Rpgr-204ENSMUST00000115532 Tnnt3Q9QZ47 272 aa13.3□□□□□ -0.28
Rpgr-204ENSMUST00000115532 Hnrnpul2Q00PI9 745 aaKnown RBP13.3□□□□□ -0.28
Rpgr-204ENSMUST00000115532 Ube2uB1AUC4 352 aa13.29□□□□□ -0.28
Rpgr-204ENSMUST00000115532 Tiam1Q60610 1591 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 127.3 ms