RNA–Protein interactions for RNA: ENSMUST00000113092.8

Rpusd3-202, Transcript of Mitochondrial mRNA pseudouridine synthase Rpusd3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rpusd3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd3-202ENSMUST00000113092 Gm35339A0A140LHH9 1649 aa43.54■■■■■ 4.56
Rpusd3-202ENSMUST00000113092 NischQ80TM9 1593 aa42.81■■■■■ 4.44
Rpusd3-202ENSMUST00000113092 Abcc8B2RUS7 1588 aa41.51■■■■■ 4.24
Rpusd3-202ENSMUST00000113092 Abcc9P70170 1546 aa41.39■■■■■ 4.22
Rpusd3-202ENSMUST00000113092 ScribQ80U72 1612 aa40.3■■■■■ 4.04
Rpusd3-202ENSMUST00000113092 NacadQ5SWP3 1504 aa38.89■■■■□ 3.82
Rpusd3-202ENSMUST00000113092 Kdm5dQ62240 1548 aa38.84■■■■□ 3.81
Rpusd3-202ENSMUST00000113092 Sycp2Q9CUU3 1500 aa38.17■■■■□ 3.7
Rpusd3-202ENSMUST00000113092 Dcaf1Q80TR8 1506 aa38.06■■■■□ 3.68
Rpusd3-202ENSMUST00000113092 BicraF8VPZ9 1578 aa37.76■■■■□ 3.64
Rpusd3-202ENSMUST00000113092 Dnajc5bQ9CQ94 199 aa37.33■■■■□ 3.57
Rpusd3-202ENSMUST00000113092 Rb1cc1Q9ESK9 1588 aa37.28■■■■□ 3.56
Rpusd3-202ENSMUST00000113092 Baz1aO88379 1555 aa36.7■■■■□ 3.47
Rpusd3-202ENSMUST00000113092 Pds5bQ4VA53 1446 aaKnown RBP36.68■■■■□ 3.46
Rpusd3-202ENSMUST00000113092 Rhox8Q6VSS7 320 aa36.6■■■■□ 3.45
Rpusd3-202ENSMUST00000113092 Ccdc180J3QNE4 1664 aa36.6■■■■□ 3.45
Rpusd3-202ENSMUST00000113092 Crybg2B7ZCC2 1516 aa36.58■■■■□ 3.45
Rpusd3-202ENSMUST00000113092 Thoc2B1AZI6 1594 aaKnown RBP36.57■■■■□ 3.45
Rpusd3-202ENSMUST00000113092 Atad2bE9Q166 1460 aaKnown RBP36.28■■■■□ 3.4
Rpusd3-202ENSMUST00000113092 Zcchc6Q5BLK4 1491 aaKnown RBP36.25■■■■□ 3.39
Rpusd3-202ENSMUST00000113092 Cc2d2aQ8CFW7 1633 aa35.98■■■■□ 3.35
Rpusd3-202ENSMUST00000113092 Ercc6F8VPZ5 1481 aa35.89■■■■□ 3.34
Rpusd3-202ENSMUST00000113092 Smarca2Q6DIC0 1577 aa35.86■■■■□ 3.33
Rpusd3-202ENSMUST00000113092 Smarca4Q3TKT4 1613 aaKnown RBP35.85■■■■□ 3.33
Rpusd3-202ENSMUST00000113092 Iqgap2Q3UQ44 1575 aa35.72■■■■□ 3.31
Rpusd3-202ENSMUST00000113092 Cecr2E9Q2Z1 1453 aa35.72■■■■□ 3.31
Rpusd3-202ENSMUST00000113092 Fam135aQ6NS59 1506 aa35.65■■■■□ 3.3
Rpusd3-202ENSMUST00000113092 Wdr62Q3U3T8 1523 aa35.48■■■■□ 3.27
Rpusd3-202ENSMUST00000113092 Frmpd1A2AKB4 1549 aa35.45■■■■□ 3.27
Rpusd3-202ENSMUST00000113092 Phldb1Q6PDH0 1371 aaKnown RBP35.28■■■■□ 3.24
Rpusd3-202ENSMUST00000113092 Baz1bQ9Z277 1479 aa35.1■■■■□ 3.21
Rpusd3-202ENSMUST00000113092 Unc13aQ4KUS2 1712 aa35.01■■■■□ 3.19
Rpusd3-202ENSMUST00000113092 Ubl4bQ9CQ84 188 aa35■■■■□ 3.19
Rpusd3-202ENSMUST00000113092 Mrc2Q64449 1479 aa34.8■■■■□ 3.16
Rpusd3-202ENSMUST00000113092 CftrP26361 1476 aa34.78■■■■□ 3.16
Rpusd3-202ENSMUST00000113092 Cttnbp2B9EJA2 1648 aa34.73■■■■□ 3.15
Rpusd3-202ENSMUST00000113092 Synj1Q8CHC4 1574 aa34.7■■■■□ 3.15
Rpusd3-202ENSMUST00000113092 Rtl1Q7M732 1744 aa34.69■■■■□ 3.14
Rpusd3-202ENSMUST00000113092 Brd4Q9ESU6 1400 aaKnown RBP34.53■■■■□ 3.12
Rpusd3-202ENSMUST00000113092 Ccdc136Q3TVA9 1136 aa34.37■■■■□ 3.09
Rpusd3-202ENSMUST00000113092 Lrriq1Q0P5X1 1673 aa34.12■■■■□ 3.05
Rpusd3-202ENSMUST00000113092 Cux2P70298 1426 aa34.11■■■■□ 3.05
Rpusd3-202ENSMUST00000113092 Esf1Q3V1V3 845 aaKnown RBP34.1■■■■□ 3.05
Rpusd3-202ENSMUST00000113092 Trim41Q5NCC3 630 aa34.09■■■■□ 3.05
Rpusd3-202ENSMUST00000113092 Dnajc5P60904 198 aa34.05■■■■□ 3.04
Rpusd3-202ENSMUST00000113092 Kif15Q6P9L6 1387 aa34.04■■■■□ 3.04
Rpusd3-202ENSMUST00000113092 Rsf1E9PWW9 1441 aaKnown RBP34.04■■■■□ 3.04
Rpusd3-202ENSMUST00000113092 Kif21aQ9QXL2 1672 aa33.96■■■■□ 3.03
Rpusd3-202ENSMUST00000113092 Lamc3Q9R0B6 1581 aa33.85■■■■□ 3.01
Rpusd3-202ENSMUST00000113092 Npm1Q61937 292 aaKnown RBP33.67■■■□□ 2.98
Rpusd3-202ENSMUST00000113092 Eif4g3Q80XI3 1579 aaKnown RBP33.6■■■□□ 2.97
Rpusd3-202ENSMUST00000113092 Cep164Q5DU05 1446 aa33.53■■■□□ 2.96
Rpusd3-202ENSMUST00000113092 Urb2E9Q7L1 1524 aaKnown RBP33.41■■■□□ 2.94
Rpusd3-202ENSMUST00000113092 TnnQ80Z71 1560 aa33.37■■■□□ 2.93
Rpusd3-202ENSMUST00000113092 Shroom2A2ALU4 1481 aa33.37■■■□□ 2.93
Rpusd3-202ENSMUST00000113092 Dhx29Q6PGC1 1365 aaKnown RBP33.35■■■□□ 2.93
Rpusd3-202ENSMUST00000113092 Plb1Q3TTY0 1478 aa33.34■■■□□ 2.93
Rpusd3-202ENSMUST00000113092 Il27Q8K3I6 234 aa33.31■■■□□ 2.92
Rpusd3-202ENSMUST00000113092 Ccdc18Q640L5 1455 aa33.3■■■□□ 2.92
Rpusd3-202ENSMUST00000113092 Top2bQ64511 1612 aa33.27■■■□□ 2.92
Rpusd3-202ENSMUST00000113092 LrpprcQ6PB66 1392 aaKnown RBP33.22■■■□□ 2.91
Rpusd3-202ENSMUST00000113092 Golga3P55937 1487 aa33.22■■■□□ 2.91
Rpusd3-202ENSMUST00000113092 Camsap1A2AHC3 1581 aa33.21■■■□□ 2.91
Rpusd3-202ENSMUST00000113092 Crocc2F6XLV1 1638 aa33.19■■■□□ 2.9
Rpusd3-202ENSMUST00000113092 Cngb1E1AZ71 1325 aa33.1■■■□□ 2.89
Rpusd3-202ENSMUST00000113092 Col17a1Q07563 1470 aa33.02■■■□□ 2.88
Rpusd3-202ENSMUST00000113092 PogzQ8BZH4 1409 aaKnown RBP33.01■■■□□ 2.87
Rpusd3-202ENSMUST00000113092 Ift140E9PY46 1464 aa32.97■■■□□ 2.87
Rpusd3-202ENSMUST00000113092 Pabpn1Q8CCS6 302 aaKnown RBP32.96■■■□□ 2.87
Rpusd3-202ENSMUST00000113092 Rusc2Q80U22 1514 aa32.96■■■□□ 2.87
Rpusd3-202ENSMUST00000113092 Fmn1Q05860 1466 aa32.9■■■□□ 2.86
Rpusd3-202ENSMUST00000113092 Duox2A2AQ99 1517 aa32.85■■■□□ 2.85
Rpusd3-202ENSMUST00000113092 Pelp1Q9DBD5 1123 aaKnown RBP32.75■■■□□ 2.83
Rpusd3-202ENSMUST00000113092 Disp1Q3TDN0 1521 aa32.74■■■□□ 2.83
Rpusd3-202ENSMUST00000113092 Grin2bQ01097 1482 aa32.72■■■□□ 2.83
Rpusd3-202ENSMUST00000113092 Setd1bQ8CFT2 1985 aa32.65■■■□□ 2.82
Rpusd3-202ENSMUST00000113092 Samd9lQ69Z37 1561 aa32.62■■■□□ 2.81
Rpusd3-202ENSMUST00000113092 Nup160Q9Z0W3 1402 aaKnown RBP32.58■■■□□ 2.81
Rpusd3-202ENSMUST00000113092 Zcchc11B2RX14 1644 aaKnown RBP32.55■■■□□ 2.8
Rpusd3-202ENSMUST00000113092 Pbrm1Q8BSQ9 1634 aaKnown RBP32.53■■■□□ 2.8
Rpusd3-202ENSMUST00000113092 Cc2d2bA0A286YDU8 1405 aa32.51■■■□□ 2.79
Rpusd3-202ENSMUST00000113092 Efcab5A0JP43 1406 aa32.49■■■□□ 2.79
Rpusd3-202ENSMUST00000113092 Rad54l2Q99NG0 1466 aa32.42■■■□□ 2.78
Rpusd3-202ENSMUST00000113092 Grin2aP35436 1464 aa32.33■■■□□ 2.77
Rpusd3-202ENSMUST00000113092 Magi3Q9EQJ9 1476 aa32.33■■■□□ 2.77
Rpusd3-202ENSMUST00000113092 Ccdc88bQ4QRL3 1481 aa32.3■■■□□ 2.76
Rpusd3-202ENSMUST00000113092 AqrQ8CFQ3 1481 aaKnown RBP32.29■■■□□ 2.76
Rpusd3-202ENSMUST00000113092 Fgd6Q69ZL1 1399 aa32.24■■■□□ 2.75
Rpusd3-202ENSMUST00000113092 NrkQ9R0G8 1455 aa32.23■■■□□ 2.75
Rpusd3-202ENSMUST00000113092 Top2aQ01320 1528 aaKnown RBP32.22■■■□□ 2.75
Rpusd3-202ENSMUST00000113092 Adgrl3Q80TS3 1537 aa32.21■■■□□ 2.75
Rpusd3-202ENSMUST00000113092 PtprkP35822 1457 aa32.16■■■□□ 2.74
Rpusd3-202ENSMUST00000113092 Cep170Q6A065 1588 aa32.15■■■□□ 2.74
Rpusd3-202ENSMUST00000113092 Gapvd1Q6PAR5 1458 aa32.12■■■□□ 2.73
Rpusd3-202ENSMUST00000113092 Pla2r1Q62028 1487 aa32.1■■■□□ 2.73
Rpusd3-202ENSMUST00000113092 Shroom4Q1W617 1475 aa32.08■■■□□ 2.73
Rpusd3-202ENSMUST00000113092 Arhgef5E9Q7D5 1581 aa32.07■■■□□ 2.72
Rpusd3-202ENSMUST00000113092 Gm156Q58A37 223 aa32.07■■■□□ 2.72
Rpusd3-202ENSMUST00000113092 Gpatch8A2A6A1 1505 aa32.05■■■□□ 2.72
Rpusd3-202ENSMUST00000113092 Pcdh10E9PXQ7 1057 aa32.05■■■□□ 2.72
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms