RNA–Protein interactions for RNA: ENSMUST00000112453.8

Sh3kbp1-205, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

TSL 5 BASIC

Gene Sh3kbp1, Length 2,515 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-205ENSMUST00000112453 Gm35339A0A140LHH9 1649 aa17.58■□□□□ 0.41
Sh3kbp1-205ENSMUST00000112453 NischQ80TM9 1593 aa17.4■□□□□ 0.38
Sh3kbp1-205ENSMUST00000112453 Abcc9P70170 1546 aa16.89■□□□□ 0.29
Sh3kbp1-205ENSMUST00000112453 Abcc8B2RUS7 1588 aa16.73■□□□□ 0.27
Sh3kbp1-205ENSMUST00000112453 ScribQ80U72 1612 aa15.88■□□□□ 0.13
Sh3kbp1-205ENSMUST00000112453 Dcaf1Q80TR8 1506 aa15.62■□□□□ 0.09
Sh3kbp1-205ENSMUST00000112453 NacadQ5SWP3 1504 aa15.52■□□□□ 0.08
Sh3kbp1-205ENSMUST00000112453 Kdm5dQ62240 1548 aa15.46■□□□□ 0.06
Sh3kbp1-205ENSMUST00000112453 Rhox8Q6VSS7 320 aa15.24■□□□□ 0.03
Sh3kbp1-205ENSMUST00000112453 Ccdc180J3QNE4 1664 aa15.24■□□□□ 0.03
Sh3kbp1-205ENSMUST00000112453 Rb1cc1Q9ESK9 1588 aa15.19■□□□□ 0.02
Sh3kbp1-205ENSMUST00000112453 Sycp2Q9CUU3 1500 aa15.17■□□□□ 0.02
Sh3kbp1-205ENSMUST00000112453 Crybg2B7ZCC2 1516 aa15.04■□□□□ -0
Sh3kbp1-205ENSMUST00000112453 Baz1aO88379 1555 aa15.03■□□□□ -0
Sh3kbp1-205ENSMUST00000112453 BicraF8VPZ9 1578 aa14.85□□□□□ -0.03
Sh3kbp1-205ENSMUST00000112453 Rtl1Q7M732 1744 aa14.77□□□□□ -0.04
Sh3kbp1-205ENSMUST00000112453 Zcchc6Q5BLK4 1491 aaKnown RBP14.66□□□□□ -0.06
Sh3kbp1-205ENSMUST00000112453 Smarca2Q6DIC0 1577 aa14.61□□□□□ -0.07
Sh3kbp1-205ENSMUST00000112453 Pds5bQ4VA53 1446 aaKnown RBP14.47□□□□□ -0.09
Sh3kbp1-205ENSMUST00000112453 Smarca4Q3TKT4 1613 aaKnown RBP14.38□□□□□ -0.11
Sh3kbp1-205ENSMUST00000112453 Atad2bE9Q166 1460 aaKnown RBP14.37□□□□□ -0.11
Sh3kbp1-205ENSMUST00000112453 Cecr2E9Q2Z1 1453 aa14.33□□□□□ -0.12
Sh3kbp1-205ENSMUST00000112453 Brd4Q9ESU6 1400 aaKnown RBP14.25□□□□□ -0.13
Sh3kbp1-205ENSMUST00000112453 Iqgap2Q3UQ44 1575 aa14.23□□□□□ -0.13
Sh3kbp1-205ENSMUST00000112453 Ccdc136Q3TVA9 1136 aa14.17□□□□□ -0.14
Sh3kbp1-205ENSMUST00000112453 Thoc2B1AZI6 1594 aaKnown RBP14.17□□□□□ -0.14
Sh3kbp1-205ENSMUST00000112453 Cttnbp2B9EJA2 1648 aa14.17□□□□□ -0.14
Sh3kbp1-205ENSMUST00000112453 Trim41Q5NCC3 630 aa14.16□□□□□ -0.14
Sh3kbp1-205ENSMUST00000112453 Ercc6F8VPZ5 1481 aa14.15□□□□□ -0.14
Sh3kbp1-205ENSMUST00000112453 CftrP26361 1476 aa14.13□□□□□ -0.15
Sh3kbp1-205ENSMUST00000112453 Synj1Q8CHC4 1574 aa14.12□□□□□ -0.15
Sh3kbp1-205ENSMUST00000112453 Wdr62Q3U3T8 1523 aa14.06□□□□□ -0.16
Sh3kbp1-205ENSMUST00000112453 Frmpd1A2AKB4 1549 aa14.01□□□□□ -0.17
Sh3kbp1-205ENSMUST00000112453 Baz1bQ9Z277 1479 aa13.97□□□□□ -0.17
Sh3kbp1-205ENSMUST00000112453 Fam135aQ6NS59 1506 aa13.94□□□□□ -0.18
Sh3kbp1-205ENSMUST00000112453 Cc2d2aQ8CFW7 1633 aa13.93□□□□□ -0.18
Sh3kbp1-205ENSMUST00000112453 Phldb1Q6PDH0 1371 aaKnown RBP13.91□□□□□ -0.18
Sh3kbp1-205ENSMUST00000112453 Esf1Q3V1V3 845 aaKnown RBP13.87□□□□□ -0.19
Sh3kbp1-205ENSMUST00000112453 Unc13aQ4KUS2 1712 aa13.87□□□□□ -0.19
Sh3kbp1-205ENSMUST00000112453 Golga3P55937 1487 aa13.84□□□□□ -0.19
Sh3kbp1-205ENSMUST00000112453 Top2bQ64511 1612 aa13.8□□□□□ -0.2
Sh3kbp1-205ENSMUST00000112453 Dnajc5bQ9CQ94 199 aa13.79□□□□□ -0.2
Sh3kbp1-205ENSMUST00000112453 Rsf1E9PWW9 1441 aaKnown RBP13.72□□□□□ -0.21
Sh3kbp1-205ENSMUST00000112453 Ubl4bQ9CQ84 188 aa13.71□□□□□ -0.21
Sh3kbp1-205ENSMUST00000112453 Lamc3Q9R0B6 1581 aa13.71□□□□□ -0.22
Sh3kbp1-205ENSMUST00000112453 Cngb1E1AZ71 1325 aa13.67□□□□□ -0.22
Sh3kbp1-205ENSMUST00000112453 HrcG5E8J6 738 aa13.65□□□□□ -0.22
Sh3kbp1-205ENSMUST00000112453 TnnQ80Z71 1560 aa13.64□□□□□ -0.23
Sh3kbp1-205ENSMUST00000112453 Fmn1Q05860 1466 aa13.64□□□□□ -0.23
Sh3kbp1-205ENSMUST00000112453 Kif15Q6P9L6 1387 aa13.6□□□□□ -0.23
Sh3kbp1-205ENSMUST00000112453 Mrc2Q64449 1479 aa13.59□□□□□ -0.23
Sh3kbp1-205ENSMUST00000112453 Cux2P70298 1426 aa13.53□□□□□ -0.24
Sh3kbp1-205ENSMUST00000112453 Ccdc18Q640L5 1455 aa13.5□□□□□ -0.25
Sh3kbp1-205ENSMUST00000112453 Cep164Q5DU05 1446 aa13.46□□□□□ -0.25
Sh3kbp1-205ENSMUST00000112453 Camsap1A2AHC3 1581 aa13.45□□□□□ -0.26
Sh3kbp1-205ENSMUST00000112453 Ccdc88bQ4QRL3 1481 aa13.44□□□□□ -0.26
Sh3kbp1-205ENSMUST00000112453 Npm1Q61937 292 aaKnown RBP13.44□□□□□ -0.26
Sh3kbp1-205ENSMUST00000112453 Top2aQ01320 1528 aaKnown RBP13.42□□□□□ -0.26
Sh3kbp1-205ENSMUST00000112453 Chic1Q8CBW7 227 aa13.36□□□□□ -0.27
Sh3kbp1-205ENSMUST00000112453 Kif21aQ9QXL2 1672 aa13.36□□□□□ -0.27
Sh3kbp1-205ENSMUST00000112453 LrpprcQ6PB66 1392 aaKnown RBP13.34□□□□□ -0.27
Sh3kbp1-205ENSMUST00000112453 Grin2bQ01097 1482 aa13.3□□□□□ -0.28
Sh3kbp1-205ENSMUST00000112453 NrkQ9R0G8 1455 aa13.3□□□□□ -0.28
Sh3kbp1-205ENSMUST00000112453 PogzQ8BZH4 1409 aaKnown RBP13.28□□□□□ -0.28
Sh3kbp1-205ENSMUST00000112453 Il27Q8K3I6 234 aa13.28□□□□□ -0.28
Sh3kbp1-205ENSMUST00000112453 Dhx29Q6PGC1 1365 aaKnown RBP13.27□□□□□ -0.29
Sh3kbp1-205ENSMUST00000112453 Crocc2F6XLV1 1638 aa13.26□□□□□ -0.29
Sh3kbp1-205ENSMUST00000112453 Lrriq1Q0P5X1 1673 aa13.26□□□□□ -0.29
Sh3kbp1-205ENSMUST00000112453 Efcab5A0JP43 1406 aa13.25□□□□□ -0.29
Sh3kbp1-205ENSMUST00000112453 Duox2A2AQ99 1517 aa13.22□□□□□ -0.29
Sh3kbp1-205ENSMUST00000112453 Shroom4Q1W617 1475 aa13.21□□□□□ -0.3
Sh3kbp1-205ENSMUST00000112453 Urb2E9Q7L1 1524 aaKnown RBP13.16□□□□□ -0.3
Sh3kbp1-205ENSMUST00000112453 Rapgef2Q8CHG7 1496 aa13.15□□□□□ -0.3
Sh3kbp1-205ENSMUST00000112453 Ift140E9PY46 1464 aa13.14□□□□□ -0.31
Sh3kbp1-205ENSMUST00000112453 Plb1Q3TTY0 1478 aa13.14□□□□□ -0.31
Sh3kbp1-205ENSMUST00000112453 Pbrm1Q8BSQ9 1634 aaKnown RBP13.13□□□□□ -0.31
Sh3kbp1-205ENSMUST00000112453 Eif4g3Q80XI3 1579 aaKnown RBP13.12□□□□□ -0.31
Sh3kbp1-205ENSMUST00000112453 PtprkP35822 1457 aa13.1□□□□□ -0.31
Sh3kbp1-205ENSMUST00000112453 Samd9lQ69Z37 1561 aa13.08□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Npm2Q80W85 207 aa13.06□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Map3k1P53349 1493 aa13.06□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Gab3Q8BSM5 595 aa13.06□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Mroh2bQ7M6Y6 1581 aa13.05□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Eif4g1Q6NZJ6 1600 aaKnown RBP13.05□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Gpatch8A2A6A1 1505 aa13.05□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 SynmQ70IV5 1561 aa13.04□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Disp1Q3TDN0 1521 aa13.04□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 Cep162Q6ZQ06 1403 aa13.03□□□□□ -0.32
Sh3kbp1-205ENSMUST00000112453 AqrQ8CFQ3 1481 aaKnown RBP13.02□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Nup160Q9Z0W3 1402 aaKnown RBP13□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Arhgap35Q91YM2 1499 aa12.99□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Cc2d2bA0A286YDU8 1405 aa12.99□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Rusc2Q80U22 1514 aa12.99□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Setd1bQ8CFT2 1985 aa12.97□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Magi3Q9EQJ9 1476 aa12.96□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Grin2aP35436 1464 aa12.96□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Rad54l2Q99NG0 1466 aa12.96□□□□□ -0.33
Sh3kbp1-205ENSMUST00000112453 Zeb1Q64318 1117 aa12.96□□□□□ -0.34
Sh3kbp1-205ENSMUST00000112453 Carmil1Q6EDY6 1374 aa12.95□□□□□ -0.34
Sh3kbp1-205ENSMUST00000112453 Polr1aO35134 1717 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 84.1 ms