RNA–Protein interactions for RNA: ENSMUST00000112053.1

Trex1-202, Transcript of Three-prime repair exonuclease 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trex1, Length 1,054 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1-202ENSMUST00000112053 Gm35339A0A140LHH9 1649 aa22.13■■□□□ 1.13
Trex1-202ENSMUST00000112053 NischQ80TM9 1593 aa21.67■■□□□ 1.06
Trex1-202ENSMUST00000112053 Abcc8B2RUS7 1588 aa21.04■□□□□ 0.96
Trex1-202ENSMUST00000112053 Abcc9P70170 1546 aa20.95■□□□□ 0.94
Trex1-202ENSMUST00000112053 ScribQ80U72 1612 aa20.49■□□□□ 0.87
Trex1-202ENSMUST00000112053 NacadQ5SWP3 1504 aa19.74■□□□□ 0.75
Trex1-202ENSMUST00000112053 Kdm5dQ62240 1548 aa19.71■□□□□ 0.75
Trex1-202ENSMUST00000112053 Sycp2Q9CUU3 1500 aa19.38■□□□□ 0.69
Trex1-202ENSMUST00000112053 Dcaf1Q80TR8 1506 aa19.3■□□□□ 0.68
Trex1-202ENSMUST00000112053 BicraF8VPZ9 1578 aa19.2■□□□□ 0.66
Trex1-202ENSMUST00000112053 Dnajc5bQ9CQ94 199 aa19.04■□□□□ 0.64
Trex1-202ENSMUST00000112053 Rb1cc1Q9ESK9 1588 aa18.87■□□□□ 0.61
Trex1-202ENSMUST00000112053 Thoc2B1AZI6 1594 aaKnown RBP18.64■□□□□ 0.57
Trex1-202ENSMUST00000112053 Pds5bQ4VA53 1446 aaKnown RBP18.63■□□□□ 0.57
Trex1-202ENSMUST00000112053 Baz1aO88379 1555 aa18.57■□□□□ 0.56
Trex1-202ENSMUST00000112053 Ccdc180J3QNE4 1664 aa18.56■□□□□ 0.56
Trex1-202ENSMUST00000112053 Crybg2B7ZCC2 1516 aa18.54■□□□□ 0.56
Trex1-202ENSMUST00000112053 Atad2bE9Q166 1460 aaKnown RBP18.42■□□□□ 0.54
Trex1-202ENSMUST00000112053 Rhox8Q6VSS7 320 aa18.38■□□□□ 0.53
Trex1-202ENSMUST00000112053 Zcchc6Q5BLK4 1491 aaKnown RBP18.32■□□□□ 0.52
Trex1-202ENSMUST00000112053 Cc2d2aQ8CFW7 1633 aa18.31■□□□□ 0.52
Trex1-202ENSMUST00000112053 Ercc6F8VPZ5 1481 aa18.21■□□□□ 0.51
Trex1-202ENSMUST00000112053 Smarca2Q6DIC0 1577 aa18.21■□□□□ 0.51
Trex1-202ENSMUST00000112053 Smarca4Q3TKT4 1613 aaKnown RBP18.19■□□□□ 0.5
Trex1-202ENSMUST00000112053 Fam135aQ6NS59 1506 aa18.13■□□□□ 0.49
Trex1-202ENSMUST00000112053 Iqgap2Q3UQ44 1575 aa18.13■□□□□ 0.49
Trex1-202ENSMUST00000112053 Cecr2E9Q2Z1 1453 aa18.08■□□□□ 0.49
Trex1-202ENSMUST00000112053 Wdr62Q3U3T8 1523 aa18.02■□□□□ 0.47
Trex1-202ENSMUST00000112053 Frmpd1A2AKB4 1549 aa18■□□□□ 0.47
Trex1-202ENSMUST00000112053 Phldb1Q6PDH0 1371 aaKnown RBP17.91■□□□□ 0.46
Trex1-202ENSMUST00000112053 Baz1bQ9Z277 1479 aa17.88■□□□□ 0.45
Trex1-202ENSMUST00000112053 Unc13aQ4KUS2 1712 aa17.81■□□□□ 0.44
Trex1-202ENSMUST00000112053 Ubl4bQ9CQ84 188 aa17.75■□□□□ 0.43
Trex1-202ENSMUST00000112053 Mrc2Q64449 1479 aa17.69■□□□□ 0.42
Trex1-202ENSMUST00000112053 CftrP26361 1476 aa17.6■□□□□ 0.41
Trex1-202ENSMUST00000112053 Cttnbp2B9EJA2 1648 aa17.59■□□□□ 0.41
Trex1-202ENSMUST00000112053 Synj1Q8CHC4 1574 aa17.56■□□□□ 0.4
Trex1-202ENSMUST00000112053 Rtl1Q7M732 1744 aa17.52■□□□□ 0.39
Trex1-202ENSMUST00000112053 Dnajc5P60904 198 aa17.44■□□□□ 0.38
Trex1-202ENSMUST00000112053 Brd4Q9ESU6 1400 aaKnown RBP17.44■□□□□ 0.38
Trex1-202ENSMUST00000112053 Lrriq1Q0P5X1 1673 aa17.36■□□□□ 0.37
Trex1-202ENSMUST00000112053 Trim41Q5NCC3 630 aa17.35■□□□□ 0.37
Trex1-202ENSMUST00000112053 Cux2P70298 1426 aa17.29■□□□□ 0.36
Trex1-202ENSMUST00000112053 Ccdc136Q3TVA9 1136 aa17.28■□□□□ 0.36
Trex1-202ENSMUST00000112053 Kif21aQ9QXL2 1672 aa17.26■□□□□ 0.35
Trex1-202ENSMUST00000112053 Rsf1E9PWW9 1441 aaKnown RBP17.23■□□□□ 0.35
Trex1-202ENSMUST00000112053 Kif15Q6P9L6 1387 aa17.22■□□□□ 0.35
Trex1-202ENSMUST00000112053 Esf1Q3V1V3 845 aaKnown RBP17.18■□□□□ 0.34
Trex1-202ENSMUST00000112053 Lamc3Q9R0B6 1581 aa17.15■□□□□ 0.34
Trex1-202ENSMUST00000112053 Eif4g3Q80XI3 1579 aaKnown RBP17.1■□□□□ 0.33
Trex1-202ENSMUST00000112053 Npm1Q61937 292 aaKnown RBP17.04■□□□□ 0.32
Trex1-202ENSMUST00000112053 Shroom2A2ALU4 1481 aa17.02■□□□□ 0.32
Trex1-202ENSMUST00000112053 Cep164Q5DU05 1446 aa16.97■□□□□ 0.31
Trex1-202ENSMUST00000112053 Urb2E9Q7L1 1524 aaKnown RBP16.96■□□□□ 0.31
Trex1-202ENSMUST00000112053 Plb1Q3TTY0 1478 aa16.91■□□□□ 0.3
Trex1-202ENSMUST00000112053 Dhx29Q6PGC1 1365 aaKnown RBP16.9■□□□□ 0.3
Trex1-202ENSMUST00000112053 TnnQ80Z71 1560 aa16.89■□□□□ 0.3
Trex1-202ENSMUST00000112053 Col17a1Q07563 1470 aa16.85■□□□□ 0.29
Trex1-202ENSMUST00000112053 Ccdc18Q640L5 1455 aa16.85■□□□□ 0.29
Trex1-202ENSMUST00000112053 Crocc2F6XLV1 1638 aa16.84■□□□□ 0.29
Trex1-202ENSMUST00000112053 Top2bQ64511 1612 aa16.82■□□□□ 0.28
Trex1-202ENSMUST00000112053 LrpprcQ6PB66 1392 aaKnown RBP16.82■□□□□ 0.28
Trex1-202ENSMUST00000112053 Camsap1A2AHC3 1581 aa16.81■□□□□ 0.28
Trex1-202ENSMUST00000112053 Il27Q8K3I6 234 aa16.81■□□□□ 0.28
Trex1-202ENSMUST00000112053 Pabpn1Q8CCS6 302 aaKnown RBP16.76■□□□□ 0.27
Trex1-202ENSMUST00000112053 Golga3P55937 1487 aa16.75■□□□□ 0.27
Trex1-202ENSMUST00000112053 Rusc2Q80U22 1514 aa16.75■□□□□ 0.27
Trex1-202ENSMUST00000112053 Ift140E9PY46 1464 aa16.72■□□□□ 0.27
Trex1-202ENSMUST00000112053 PogzQ8BZH4 1409 aaKnown RBP16.71■□□□□ 0.27
Trex1-202ENSMUST00000112053 Duox2A2AQ99 1517 aa16.64■□□□□ 0.25
Trex1-202ENSMUST00000112053 Cngb1E1AZ71 1325 aa16.64■□□□□ 0.25
Trex1-202ENSMUST00000112053 Setd1bQ8CFT2 1985 aa16.62■□□□□ 0.25
Trex1-202ENSMUST00000112053 Fmn1Q05860 1466 aa16.61■□□□□ 0.25
Trex1-202ENSMUST00000112053 Pelp1Q9DBD5 1123 aaKnown RBP16.61■□□□□ 0.25
Trex1-202ENSMUST00000112053 Disp1Q3TDN0 1521 aa16.6■□□□□ 0.25
Trex1-202ENSMUST00000112053 Zcchc11B2RX14 1644 aaKnown RBP16.6■□□□□ 0.25
Trex1-202ENSMUST00000112053 Grin2bQ01097 1482 aa16.54■□□□□ 0.24
Trex1-202ENSMUST00000112053 Samd9lQ69Z37 1561 aa16.53■□□□□ 0.24
Trex1-202ENSMUST00000112053 Nup160Q9Z0W3 1402 aaKnown RBP16.53■□□□□ 0.24
Trex1-202ENSMUST00000112053 Pbrm1Q8BSQ9 1634 aaKnown RBP16.52■□□□□ 0.23
Trex1-202ENSMUST00000112053 Cc2d2bA0A286YDU8 1405 aa16.48■□□□□ 0.23
Trex1-202ENSMUST00000112053 Efcab5A0JP43 1406 aa16.44■□□□□ 0.22
Trex1-202ENSMUST00000112053 Rad54l2Q99NG0 1466 aa16.41■□□□□ 0.22
Trex1-202ENSMUST00000112053 Magi3Q9EQJ9 1476 aa16.39■□□□□ 0.21
Trex1-202ENSMUST00000112053 Adgrl3Q80TS3 1537 aa16.39■□□□□ 0.21
Trex1-202ENSMUST00000112053 Grin2aP35436 1464 aa16.37■□□□□ 0.21
Trex1-202ENSMUST00000112053 AqrQ8CFQ3 1481 aaKnown RBP16.37■□□□□ 0.21
Trex1-202ENSMUST00000112053 Arhgef5E9Q7D5 1581 aa16.35■□□□□ 0.21
Trex1-202ENSMUST00000112053 Cep170Q6A065 1588 aa16.35■□□□□ 0.21
Trex1-202ENSMUST00000112053 Fgd6Q69ZL1 1399 aa16.35■□□□□ 0.21
Trex1-202ENSMUST00000112053 PtprkP35822 1457 aa16.35■□□□□ 0.21
Trex1-202ENSMUST00000112053 Pcdh10E9PXQ7 1057 aa16.34■□□□□ 0.21
Trex1-202ENSMUST00000112053 Gapvd1Q6PAR5 1458 aa16.32■□□□□ 0.2
Trex1-202ENSMUST00000112053 NrkQ9R0G8 1455 aa16.29■□□□□ 0.2
Trex1-202ENSMUST00000112053 Gm156Q58A37 223 aa16.29■□□□□ 0.2
Trex1-202ENSMUST00000112053 Gpatch8A2A6A1 1505 aa16.29■□□□□ 0.2
Trex1-202ENSMUST00000112053 Ccdc88bQ4QRL3 1481 aa16.27■□□□□ 0.19
Trex1-202ENSMUST00000112053 Top2aQ01320 1528 aaKnown RBP16.26■□□□□ 0.19
Trex1-202ENSMUST00000112053 PtprtQ99M80 1454 aa16.26■□□□□ 0.19
Trex1-202ENSMUST00000112053 Pla2r1Q62028 1487 aa16.25■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 132.1 ms