RNA–Protein interactions for RNA: ENSMUST00000111354.1

Nr1h3-202, Transcript of Oxysterols receptor LXR-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nr1h3, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3-202ENSMUST00000111354 Gm35339A0A140LHH9 1649 aa36.41■■■■□ 3.42
Nr1h3-202ENSMUST00000111354 NischQ80TM9 1593 aa36.09■■■■□ 3.37
Nr1h3-202ENSMUST00000111354 Abcc9P70170 1546 aa35.01■■■■□ 3.2
Nr1h3-202ENSMUST00000111354 Abcc8B2RUS7 1588 aa34.76■■■■□ 3.15
Nr1h3-202ENSMUST00000111354 ScribQ80U72 1612 aa33.24■■■□□ 2.91
Nr1h3-202ENSMUST00000111354 Kdm5dQ62240 1548 aa32.22■■■□□ 2.75
Nr1h3-202ENSMUST00000111354 NacadQ5SWP3 1504 aa32.17■■■□□ 2.74
Nr1h3-202ENSMUST00000111354 Dcaf1Q80TR8 1506 aa32.15■■■□□ 2.74
Nr1h3-202ENSMUST00000111354 Rhox8Q6VSS7 320 aa31.57■■■□□ 2.64
Nr1h3-202ENSMUST00000111354 Sycp2Q9CUU3 1500 aa31.54■■■□□ 2.64
Nr1h3-202ENSMUST00000111354 Rb1cc1Q9ESK9 1588 aa31.51■■■□□ 2.63
Nr1h3-202ENSMUST00000111354 Ccdc180J3QNE4 1664 aa31.23■■■□□ 2.59
Nr1h3-202ENSMUST00000111354 Baz1aO88379 1555 aa31.1■■■□□ 2.57
Nr1h3-202ENSMUST00000111354 BicraF8VPZ9 1578 aa31.07■■■□□ 2.56
Nr1h3-202ENSMUST00000111354 Crybg2B7ZCC2 1516 aa30.9■■■□□ 2.54
Nr1h3-202ENSMUST00000111354 Zcchc6Q5BLK4 1491 aaKnown RBP30.48■■■□□ 2.47
Nr1h3-202ENSMUST00000111354 Rtl1Q7M732 1744 aa30.3■■■□□ 2.44
Nr1h3-202ENSMUST00000111354 Smarca2Q6DIC0 1577 aa30.28■■■□□ 2.44
Nr1h3-202ENSMUST00000111354 Pds5bQ4VA53 1446 aaKnown RBP29.96■■■□□ 2.39
Nr1h3-202ENSMUST00000111354 Cecr2E9Q2Z1 1453 aa29.93■■■□□ 2.38
Nr1h3-202ENSMUST00000111354 Smarca4Q3TKT4 1613 aaKnown RBP29.83■■■□□ 2.37
Nr1h3-202ENSMUST00000111354 Atad2bE9Q166 1460 aaKnown RBP29.82■■■□□ 2.36
Nr1h3-202ENSMUST00000111354 Iqgap2Q3UQ44 1575 aa29.59■■■□□ 2.33
Nr1h3-202ENSMUST00000111354 Thoc2B1AZI6 1594 aaKnown RBP29.59■■■□□ 2.33
Nr1h3-202ENSMUST00000111354 Ccdc136Q3TVA9 1136 aa29.5■■■□□ 2.31
Nr1h3-202ENSMUST00000111354 Brd4Q9ESU6 1400 aaKnown RBP29.37■■■□□ 2.29
Nr1h3-202ENSMUST00000111354 Synj1Q8CHC4 1574 aa29.36■■■□□ 2.29
Nr1h3-202ENSMUST00000111354 CftrP26361 1476 aa29.35■■■□□ 2.29
Nr1h3-202ENSMUST00000111354 Ercc6F8VPZ5 1481 aa29.33■■■□□ 2.29
Nr1h3-202ENSMUST00000111354 Cttnbp2B9EJA2 1648 aa29.32■■■□□ 2.28
Nr1h3-202ENSMUST00000111354 Dnajc5bQ9CQ94 199 aa29.31■■■□□ 2.28
Nr1h3-202ENSMUST00000111354 Wdr62Q3U3T8 1523 aa29.25■■■□□ 2.27
Nr1h3-202ENSMUST00000111354 Frmpd1A2AKB4 1549 aa29.21■■■□□ 2.27
Nr1h3-202ENSMUST00000111354 Cc2d2aQ8CFW7 1633 aa29.12■■■□□ 2.25
Nr1h3-202ENSMUST00000111354 Trim41Q5NCC3 630 aa29.06■■■□□ 2.24
Nr1h3-202ENSMUST00000111354 Fam135aQ6NS59 1506 aa29.01■■■□□ 2.24
Nr1h3-202ENSMUST00000111354 Unc13aQ4KUS2 1712 aa28.94■■■□□ 2.22
Nr1h3-202ENSMUST00000111354 Phldb1Q6PDH0 1371 aaKnown RBP28.86■■■□□ 2.21
Nr1h3-202ENSMUST00000111354 Esf1Q3V1V3 845 aaKnown RBP28.71■■■□□ 2.19
Nr1h3-202ENSMUST00000111354 Baz1bQ9Z277 1479 aa28.63■■■□□ 2.17
Nr1h3-202ENSMUST00000111354 Golga3P55937 1487 aa28.57■■■□□ 2.16
Nr1h3-202ENSMUST00000111354 Top2bQ64511 1612 aa28.55■■■□□ 2.16
Nr1h3-202ENSMUST00000111354 Ubl4bQ9CQ84 188 aa28.52■■■□□ 2.16
Nr1h3-202ENSMUST00000111354 Rsf1E9PWW9 1441 aaKnown RBP28.38■■■□□ 2.13
Nr1h3-202ENSMUST00000111354 Lamc3Q9R0B6 1581 aa28.37■■■□□ 2.13
Nr1h3-202ENSMUST00000111354 Cngb1E1AZ71 1325 aa28.34■■■□□ 2.13
Nr1h3-202ENSMUST00000111354 Mrc2Q64449 1479 aa28.29■■■□□ 2.12
Nr1h3-202ENSMUST00000111354 Kif15Q6P9L6 1387 aa28.29■■■□□ 2.12
Nr1h3-202ENSMUST00000111354 TnnQ80Z71 1560 aa28.26■■■□□ 2.11
Nr1h3-202ENSMUST00000111354 Cux2P70298 1426 aa28.15■■■□□ 2.1
Nr1h3-202ENSMUST00000111354 Fmn1Q05860 1466 aa28.13■■■□□ 2.09
Nr1h3-202ENSMUST00000111354 Ccdc88bQ4QRL3 1481 aa27.98■■■□□ 2.07
Nr1h3-202ENSMUST00000111354 Camsap1A2AHC3 1581 aa27.93■■■□□ 2.06
Nr1h3-202ENSMUST00000111354 Kif21aQ9QXL2 1672 aa27.89■■■□□ 2.06
Nr1h3-202ENSMUST00000111354 Ccdc18Q640L5 1455 aa27.86■■■□□ 2.05
Nr1h3-202ENSMUST00000111354 Npm1Q61937 292 aaKnown RBP27.82■■■□□ 2.04
Nr1h3-202ENSMUST00000111354 Cep164Q5DU05 1446 aa27.81■■■□□ 2.04
Nr1h3-202ENSMUST00000111354 Chic1Q8CBW7 227 aa27.81■■■□□ 2.04
Nr1h3-202ENSMUST00000111354 HrcG5E8J6 738 aa27.8■■■□□ 2.04
Nr1h3-202ENSMUST00000111354 Top2aQ01320 1528 aaKnown RBP27.75■■■□□ 2.03
Nr1h3-202ENSMUST00000111354 Il27Q8K3I6 234 aa27.72■■■□□ 2.03
Nr1h3-202ENSMUST00000111354 Lrriq1Q0P5X1 1673 aa27.69■■■□□ 2.02
Nr1h3-202ENSMUST00000111354 LrpprcQ6PB66 1392 aaKnown RBP27.66■■■□□ 2.02
Nr1h3-202ENSMUST00000111354 Dhx29Q6PGC1 1365 aaKnown RBP27.61■■■□□ 2.01
Nr1h3-202ENSMUST00000111354 Grin2bQ01097 1482 aa27.58■■■□□ 2.01
Nr1h3-202ENSMUST00000111354 PogzQ8BZH4 1409 aaKnown RBP27.56■■■□□ 2
Nr1h3-202ENSMUST00000111354 Crocc2F6XLV1 1638 aa27.52■■■□□ 2
Nr1h3-202ENSMUST00000111354 Duox2A2AQ99 1517 aa27.46■■□□□ 1.99
Nr1h3-202ENSMUST00000111354 Urb2E9Q7L1 1524 aaKnown RBP27.45■■□□□ 1.98
Nr1h3-202ENSMUST00000111354 Plb1Q3TTY0 1478 aa27.42■■□□□ 1.98
Nr1h3-202ENSMUST00000111354 NrkQ9R0G8 1455 aa27.42■■□□□ 1.98
Nr1h3-202ENSMUST00000111354 Efcab5A0JP43 1406 aa27.35■■□□□ 1.97
Nr1h3-202ENSMUST00000111354 PtprkP35822 1457 aa27.33■■□□□ 1.97
Nr1h3-202ENSMUST00000111354 Shroom4Q1W617 1475 aa27.31■■□□□ 1.96
Nr1h3-202ENSMUST00000111354 Samd9lQ69Z37 1561 aa27.29■■□□□ 1.96
Nr1h3-202ENSMUST00000111354 Eif4g3Q80XI3 1579 aaKnown RBP27.29■■□□□ 1.96
Nr1h3-202ENSMUST00000111354 Ift140E9PY46 1464 aa27.2■■□□□ 1.94
Nr1h3-202ENSMUST00000111354 Disp1Q3TDN0 1521 aa27.14■■□□□ 1.94
Nr1h3-202ENSMUST00000111354 Gab3Q8BSM5 595 aa27.13■■□□□ 1.93
Nr1h3-202ENSMUST00000111354 Setd1bQ8CFT2 1985 aa27.12■■□□□ 1.93
Nr1h3-202ENSMUST00000111354 Rapgef2Q8CHG7 1496 aa27.12■■□□□ 1.93
Nr1h3-202ENSMUST00000111354 Pbrm1Q8BSQ9 1634 aaKnown RBP27.05■■□□□ 1.92
Nr1h3-202ENSMUST00000111354 Rad54l2Q99NG0 1466 aa27.05■■□□□ 1.92
Nr1h3-202ENSMUST00000111354 SynmQ70IV5 1561 aa27.02■■□□□ 1.92
Nr1h3-202ENSMUST00000111354 Rusc2Q80U22 1514 aa27.01■■□□□ 1.91
Nr1h3-202ENSMUST00000111354 Magi3Q9EQJ9 1476 aa27.01■■□□□ 1.91
Nr1h3-202ENSMUST00000111354 Nup160Q9Z0W3 1402 aaKnown RBP27■■□□□ 1.91
Nr1h3-202ENSMUST00000111354 Eif4g1Q6NZJ6 1600 aaKnown RBP27■■□□□ 1.91
Nr1h3-202ENSMUST00000111354 Mroh2bQ7M6Y6 1581 aa26.99■■□□□ 1.91
Nr1h3-202ENSMUST00000111354 Npm2Q80W85 207 aa26.97■■□□□ 1.91
Nr1h3-202ENSMUST00000111354 Grin2aP35436 1464 aa26.95■■□□□ 1.9
Nr1h3-202ENSMUST00000111354 Arhgap35Q91YM2 1499 aa26.93■■□□□ 1.9
Nr1h3-202ENSMUST00000111354 Gpatch8A2A6A1 1505 aa26.92■■□□□ 1.9
Nr1h3-202ENSMUST00000111354 Cep162Q6ZQ06 1403 aa26.91■■□□□ 1.9
Nr1h3-202ENSMUST00000111354 Pla2r1Q62028 1487 aa26.9■■□□□ 1.9
Nr1h3-202ENSMUST00000111354 Cc2d2bA0A286YDU8 1405 aa26.88■■□□□ 1.89
Nr1h3-202ENSMUST00000111354 Map3k1P53349 1493 aa26.87■■□□□ 1.89
Nr1h3-202ENSMUST00000111354 Zeb1Q64318 1117 aa26.82■■□□□ 1.88
Nr1h3-202ENSMUST00000111354 AqrQ8CFQ3 1481 aaKnown RBP26.78■■□□□ 1.88
Nr1h3-202ENSMUST00000111354 Carmil1Q6EDY6 1374 aa26.72■■□□□ 1.87
Retrieved 100 of 22,080 RNA–protein pairs in 333.3 ms