RNA–Protein interactions for RNA: ENSMUST00000111338.9

Ckap5-204, Transcript of Cytoskeleton-associated protein 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap5, Length 6,665 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap5-204ENSMUST00000111338 Rhox8Q6VSS7 320 aa8.06□□□□□ -1.12
Ckap5-204ENSMUST00000111338 Amer1Q7TS75 1132 aa7.58□□□□□ -1.2
Ckap5-204ENSMUST00000111338 Ube2uB1AUC4 352 aa7.38□□□□□ -1.23
Ckap5-204ENSMUST00000111338 Zeb1Q64318 1117 aa7.3□□□□□ -1.24
Ckap5-204ENSMUST00000111338 Esf1Q3V1V3 845 aaKnown RBP7.28□□□□□ -1.24
Ckap5-204ENSMUST00000111338 Pelp1Q9DBD5 1123 aaKnown RBP7.18□□□□□ -1.26
Ckap5-204ENSMUST00000111338 Cngb1E1AZ71 1325 aa7.18□□□□□ -1.26
Ckap5-204ENSMUST00000111338 4930567H17RikQ3V0K5 233 aa7.16□□□□□ -1.26
Ckap5-204ENSMUST00000111338 Npm2Q80W85 207 aa7.13□□□□□ -1.27
Ckap5-204ENSMUST00000111338 Ttbk1Q6PCN3 1308 aa7.12□□□□□ -1.27
Ckap5-204ENSMUST00000111338 Wdr66E9Q743 1299 aa7.09□□□□□ -1.27
Ckap5-204ENSMUST00000111338 Las1lA2BE28 776 aaKnown RBP7.08□□□□□ -1.28
Ckap5-204ENSMUST00000111338 Ehmt2Q9Z148 1263 aaKnown RBP7.03□□□□□ -1.28
Ckap5-204ENSMUST00000111338 Rpgrip1Q9EPQ2 1331 aa7.03□□□□□ -1.28
Ckap5-204ENSMUST00000111338 Myt1lP97500 1187 aa6.98□□□□□ -1.29
Ckap5-204ENSMUST00000111338 Ccdc136Q3TVA9 1136 aa6.98□□□□□ -1.29
Ckap5-204ENSMUST00000111338 Gab3Q8BSM5 595 aa6.95□□□□□ -1.3
Ckap5-204ENSMUST00000111338 Os9Q8K2C7 672 aa6.84□□□□□ -1.31
Ckap5-204ENSMUST00000111338 Trim41Q5NCC3 630 aa6.82□□□□□ -1.32
Ckap5-204ENSMUST00000111338 4933416C03RikQ3V063 378 aa6.79□□□□□ -1.32
Ckap5-204ENSMUST00000111338 Gm13697A2AK42 830 aa6.79□□□□□ -1.32
Ckap5-204ENSMUST00000111338 Slc24a1Q91WD8 1130 aa6.78□□□□□ -1.32
Ckap5-204ENSMUST00000111338 Il27Q8K3I6 234 aa6.78□□□□□ -1.32
Ckap5-204ENSMUST00000111338 Myt1Q8CFC2 1127 aa6.75□□□□□ -1.33
Ckap5-204ENSMUST00000111338 HrcG5E8J6 738 aa6.73□□□□□ -1.33
Ckap5-204ENSMUST00000111338 Anp32bQ9EST5 272 aaKnown RBP6.69□□□□□ -1.34
Ckap5-204ENSMUST00000111338 Plppr3Q7TPB0 716 aa6.69□□□□□ -1.34
Ckap5-204ENSMUST00000111338 Stra8P70278 393 aa6.68□□□□□ -1.34
Ckap5-204ENSMUST00000111338 DiexfQ8BTT6 772 aaKnown RBP6.68□□□□□ -1.34
Ckap5-204ENSMUST00000111338 UbtfP25976 765 aaKnown RBP6.66□□□□□ -1.34
Ckap5-204ENSMUST00000111338 Ifnlr1Q8CGK5 535 aa6.65□□□□□ -1.34
Ckap5-204ENSMUST00000111338 Chic1Q8CBW7 227 aa6.65□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Neurod1Q60867 357 aa6.65□□□□□ -1.35
Ckap5-204ENSMUST00000111338 NclP09405 707 aaKnown RBP6.62□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Gm13695A2AK44 830 aa6.62□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Atp1b4Q99ME6 356 aa6.61□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Ythdc1E9Q5K9 736 aaKnown RBP6.6□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Ap3b1Q9Z1T1 1105 aa6.6□□□□□ -1.35
Ckap5-204ENSMUST00000111338 NeflP08551 543 aa6.6□□□□□ -1.35
Ckap5-204ENSMUST00000111338 CatipB9EKE5 520 aa6.59□□□□□ -1.35
Ckap5-204ENSMUST00000111338 NrdcQ8BHG1 1161 aa6.59□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Zbtb7cQ8VCZ7 619 aa6.59□□□□□ -1.35
Ckap5-204ENSMUST00000111338 Fam50aQ9WV03 339 aaKnown RBP6.58□□□□□ -1.36
Ckap5-204ENSMUST00000111338 Hnrnpul2Q00PI9 745 aaKnown RBP6.55□□□□□ -1.36
Ckap5-204ENSMUST00000111338 Cdk11bP24788 784 aaKnown RBP6.54□□□□□ -1.36
Ckap5-204ENSMUST00000111338 CenpbP27790 599 aa6.54□□□□□ -1.36
Ckap5-204ENSMUST00000111338 Lmod3E9QA62 571 aa6.52□□□□□ -1.37
Ckap5-204ENSMUST00000111338 Erich6D3Z6S9 713 aa6.5□□□□□ -1.37
Ckap5-204ENSMUST00000111338 Safb2Q80YR5 991 aaKnown RBP6.49□□□□□ -1.37
Ckap5-204ENSMUST00000111338 Eif5bQ05D44 1216 aaKnown RBP6.49□□□□□ -1.37
Ckap5-204ENSMUST00000111338 Acin1Q9JIX8 1338 aaKnown RBP6.48□□□□□ -1.37
Ckap5-204ENSMUST00000111338 NefmP08553 848 aa6.45□□□□□ -1.38
Ckap5-204ENSMUST00000111338 Npm1Q61937 292 aaKnown RBP6.44□□□□□ -1.38
Ckap5-204ENSMUST00000111338 Nlrp6Q91WS2 869 aa6.43□□□□□ -1.38
Ckap5-204ENSMUST00000111338 Rangap1P46061 589 aaKnown RBP6.42□□□□□ -1.38
Ckap5-204ENSMUST00000111338 Prdm10Q3UTQ7 1184 aa6.42□□□□□ -1.38
Ckap5-204ENSMUST00000111338 Podxl2Q8CAE9 603 aa6.41□□□□□ -1.38
Ckap5-204ENSMUST00000111338 BccipQ9CWI3 316 aa6.41□□□□□ -1.38
Ckap5-204ENSMUST00000111338 Rtl5Q5DTT4 599 aa6.4□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Zbtb4Q5F293 982 aa6.4□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Hdac5Q9Z2V6 1113 aa6.39□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Fkbp15Q6P9Q6 1216 aaKnown RBP6.39□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Polr3glQ8R0C0 218 aa6.38□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Gm35339A0A140LHH9 1649 aa6.38□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Znf326O88291 580 aa6.35□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Abcc9P70170 1546 aa6.34□□□□□ -1.39
Ckap5-204ENSMUST00000111338 Slc4a1apE9PX68 744 aa6.32□□□□□ -1.4
Ckap5-204ENSMUST00000111338 ArxO35085 564 aa6.32□□□□□ -1.4
Ckap5-204ENSMUST00000111338 Lmod2Q3UHZ5 550 aa6.32□□□□□ -1.4
Ckap5-204ENSMUST00000111338 Hsp90aa1P07901 733 aaKnown RBP6.32□□□□□ -1.4
Ckap5-204ENSMUST00000111338 Zcchc6Q5BLK4 1491 aaKnown RBP6.32□□□□□ -1.4
Ckap5-204ENSMUST00000111338 Prm3Q62100 101 aa6.31□□□□□ -1.4
Ckap5-204ENSMUST00000111338 P3h3Q8CG70 732 aa6.29□□□□□ -1.4
Ckap5-204ENSMUST00000111338 NischQ80TM9 1593 aa6.29□□□□□ -1.4
Ckap5-204ENSMUST00000111338 Tnnt3Q9QZ47 272 aa6.28□□□□□ -1.4
Ckap5-204ENSMUST00000111338 MyclP10166 368 aa6.28□□□□□ -1.4
Ckap5-204ENSMUST00000111338 Ggt6Q6PDE7 497 aa6.23□□□□□ -1.41
Ckap5-204ENSMUST00000111338 DaxxO35613 739 aa6.23□□□□□ -1.41
Ckap5-204ENSMUST00000111338 Irx6Q9ER75 438 aa6.22□□□□□ -1.41
Ckap5-204ENSMUST00000111338 TonslQ6NZL6 1363 aa6.21□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Ppargc1bQ8VHJ7 1014 aa6.21□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Fgd1P52734 960 aa6.19□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Znf316Q6PGE4 1016 aa6.18□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Rtn4Q99P72 1162 aaKnown RBP6.17□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Clstn1Q9EPL2 979 aa6.17□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Nop58Q6DFW4 536 aaKnown RBP6.17□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Vsig10D3YX43 558 aa6.16□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Upf2A2AT37 1269 aaKnown RBP6.16□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Ubl4bQ9CQ84 188 aa6.16□□□□□ -1.42
Ckap5-204ENSMUST00000111338 Ppm1fQ8CGA0 452 aa6.14□□□□□ -1.43
Ckap5-204ENSMUST00000111338 Plekhg3Q4VAC9 1341 aa6.13□□□□□ -1.43
Ckap5-204ENSMUST00000111338 Plagl1Q9JLQ4 704 aa6.13□□□□□ -1.43
Ckap5-204ENSMUST00000111338 Q8BT18 775 aa6.12□□□□□ -1.43
Ckap5-204ENSMUST00000111338 NgefQ8CHT1 710 aa6.11□□□□□ -1.43
Ckap5-204ENSMUST00000111338 Ccdc180J3QNE4 1664 aa6.11□□□□□ -1.43
Ckap5-204ENSMUST00000111338 Aplp2Q06335 707 aa6.1□□□□□ -1.43
Ckap5-204ENSMUST00000111338 Clstn2Q9ER65 966 aa6.09□□□□□ -1.44
Ckap5-204ENSMUST00000111338 MlecQ6ZQI3 291 aaKnown RBP6.08□□□□□ -1.44
Ckap5-204ENSMUST00000111338 Ppp1r18Q8BQ30 594 aa6.08□□□□□ -1.44
Ckap5-204ENSMUST00000111338 IqubQ8CDK3 788 aa6.08□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms