RNA–Protein interactions for RNA: ENSMUST00000111191.8

Cd44-205, Transcript of CD44 antigen, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cd44, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44-205ENSMUST00000111191 Gm35339A0A140LHH9 1649 aa16.46■□□□□ 0.23
Cd44-205ENSMUST00000111191 NischQ80TM9 1593 aa16.35■□□□□ 0.21
Cd44-205ENSMUST00000111191 Abcc9P70170 1546 aa15.87■□□□□ 0.13
Cd44-205ENSMUST00000111191 Abcc8B2RUS7 1588 aa15.78■□□□□ 0.12
Cd44-205ENSMUST00000111191 ScribQ80U72 1612 aa15.06■□□□□ 0
Cd44-205ENSMUST00000111191 Kdm5dQ62240 1548 aa14.6□□□□□ -0.07
Cd44-205ENSMUST00000111191 Dcaf1Q80TR8 1506 aa14.6□□□□□ -0.07
Cd44-205ENSMUST00000111191 NacadQ5SWP3 1504 aa14.57□□□□□ -0.08
Cd44-205ENSMUST00000111191 Sycp2Q9CUU3 1500 aa14.31□□□□□ -0.12
Cd44-205ENSMUST00000111191 Rhox8Q6VSS7 320 aa14.29□□□□□ -0.12
Cd44-205ENSMUST00000111191 Rb1cc1Q9ESK9 1588 aa14.24□□□□□ -0.13
Cd44-205ENSMUST00000111191 Chic1Q8CBW7 227 aa14.22□□□□□ -0.13
Cd44-205ENSMUST00000111191 BicraF8VPZ9 1578 aa14.09□□□□□ -0.15
Cd44-205ENSMUST00000111191 Baz1aO88379 1555 aa14.08□□□□□ -0.16
Cd44-205ENSMUST00000111191 Ccdc180J3QNE4 1664 aa14.06□□□□□ -0.16
Cd44-205ENSMUST00000111191 Mapk8ip2Q9ERE9 830 aa14.05□□□□□ -0.16
Cd44-205ENSMUST00000111191 Crybg2B7ZCC2 1516 aa14.04□□□□□ -0.16
Cd44-205ENSMUST00000111191 Zcchc6Q5BLK4 1491 aaKnown RBP13.79□□□□□ -0.2
Cd44-205ENSMUST00000111191 Smarca2Q6DIC0 1577 aa13.72□□□□□ -0.21
Cd44-205ENSMUST00000111191 Cecr2E9Q2Z1 1453 aa13.62□□□□□ -0.23
Cd44-205ENSMUST00000111191 Pds5bQ4VA53 1446 aaKnown RBP13.57□□□□□ -0.24
Cd44-205ENSMUST00000111191 Rtl1Q7M732 1744 aa13.53□□□□□ -0.24
Cd44-205ENSMUST00000111191 Atad2bE9Q166 1460 aaKnown RBP13.53□□□□□ -0.24
Cd44-205ENSMUST00000111191 Smarca4Q3TKT4 1613 aaKnown RBP13.49□□□□□ -0.25
Cd44-205ENSMUST00000111191 Ccdc136Q3TVA9 1136 aa13.39□□□□□ -0.27
Cd44-205ENSMUST00000111191 Thoc2B1AZI6 1594 aaKnown RBP13.38□□□□□ -0.27
Cd44-205ENSMUST00000111191 Iqgap2Q3UQ44 1575 aa13.38□□□□□ -0.27
Cd44-205ENSMUST00000111191 Dnajc5bQ9CQ94 199 aa13.36□□□□□ -0.27
Cd44-205ENSMUST00000111191 CftrP26361 1476 aa13.33□□□□□ -0.27
Cd44-205ENSMUST00000111191 Brd4Q9ESU6 1400 aaKnown RBP13.31□□□□□ -0.28
Cd44-205ENSMUST00000111191 Synj1Q8CHC4 1574 aa13.3□□□□□ -0.28
Cd44-205ENSMUST00000111191 Frmpd1A2AKB4 1549 aa13.25□□□□□ -0.29
Cd44-205ENSMUST00000111191 Wdr62Q3U3T8 1523 aa13.25□□□□□ -0.29
Cd44-205ENSMUST00000111191 Ercc6F8VPZ5 1481 aa13.23□□□□□ -0.29
Cd44-205ENSMUST00000111191 Cttnbp2B9EJA2 1648 aa13.22□□□□□ -0.29
Cd44-205ENSMUST00000111191 Trim41Q5NCC3 630 aa13.18□□□□□ -0.3
Cd44-205ENSMUST00000111191 Cc2d2aQ8CFW7 1633 aa13.15□□□□□ -0.3
Cd44-205ENSMUST00000111191 Fam135aQ6NS59 1506 aa13.13□□□□□ -0.31
Cd44-205ENSMUST00000111191 Phldb1Q6PDH0 1371 aaKnown RBP13.09□□□□□ -0.31
Cd44-205ENSMUST00000111191 Unc13aQ4KUS2 1712 aa13.01□□□□□ -0.33
Cd44-205ENSMUST00000111191 Esf1Q3V1V3 845 aaKnown RBP12.97□□□□□ -0.33
Cd44-205ENSMUST00000111191 Golga3P55937 1487 aa12.97□□□□□ -0.33
Cd44-205ENSMUST00000111191 Baz1bQ9Z277 1479 aa12.95□□□□□ -0.34
Cd44-205ENSMUST00000111191 Phf23Q8BSN5 401 aa12.93□□□□□ -0.34
Cd44-205ENSMUST00000111191 Ubl4bQ9CQ84 188 aa12.93□□□□□ -0.34
Cd44-205ENSMUST00000111191 Top2bQ64511 1612 aa12.91□□□□□ -0.34
Cd44-205ENSMUST00000111191 Lamc3Q9R0B6 1581 aa12.85□□□□□ -0.35
Cd44-205ENSMUST00000111191 Rsf1E9PWW9 1441 aaKnown RBP12.85□□□□□ -0.35
Cd44-205ENSMUST00000111191 Cngb1E1AZ71 1325 aa12.82□□□□□ -0.36
Cd44-205ENSMUST00000111191 Kif15Q6P9L6 1387 aa12.82□□□□□ -0.36
Cd44-205ENSMUST00000111191 TnnQ80Z71 1560 aa12.8□□□□□ -0.36
Cd44-205ENSMUST00000111191 Mrc2Q64449 1479 aa12.79□□□□□ -0.36
Cd44-205ENSMUST00000111191 Cux2P70298 1426 aa12.76□□□□□ -0.37
Cd44-205ENSMUST00000111191 Fmn1Q05860 1466 aa12.75□□□□□ -0.37
Cd44-205ENSMUST00000111191 Ccdc88bQ4QRL3 1481 aa12.73□□□□□ -0.37
Cd44-205ENSMUST00000111191 HrcG5E8J6 738 aa12.66□□□□□ -0.38
Cd44-205ENSMUST00000111191 Camsap1A2AHC3 1581 aa12.64□□□□□ -0.39
Cd44-205ENSMUST00000111191 Npm1Q61937 292 aaKnown RBP12.59□□□□□ -0.39
Cd44-205ENSMUST00000111191 Ccdc18Q640L5 1455 aa12.58□□□□□ -0.4
Cd44-205ENSMUST00000111191 Cep164Q5DU05 1446 aa12.57□□□□□ -0.4
Cd44-205ENSMUST00000111191 Top2aQ01320 1528 aaKnown RBP12.57□□□□□ -0.4
Cd44-205ENSMUST00000111191 Kif21aQ9QXL2 1672 aa12.56□□□□□ -0.4
Cd44-205ENSMUST00000111191 LrpprcQ6PB66 1392 aaKnown RBP12.55□□□□□ -0.4
Cd44-205ENSMUST00000111191 Il27Q8K3I6 234 aa12.54□□□□□ -0.4
Cd44-205ENSMUST00000111191 Dhx29Q6PGC1 1365 aaKnown RBP12.52□□□□□ -0.41
Cd44-205ENSMUST00000111191 Grin2bQ01097 1482 aa12.51□□□□□ -0.41
Cd44-205ENSMUST00000111191 PogzQ8BZH4 1409 aaKnown RBP12.51□□□□□ -0.41
Cd44-205ENSMUST00000111191 Lrriq1Q0P5X1 1673 aa12.47□□□□□ -0.41
Cd44-205ENSMUST00000111191 Duox2A2AQ99 1517 aa12.45□□□□□ -0.42
Cd44-205ENSMUST00000111191 NrkQ9R0G8 1455 aa12.44□□□□□ -0.42
Cd44-205ENSMUST00000111191 Urb2E9Q7L1 1524 aaKnown RBP12.44□□□□□ -0.42
Cd44-205ENSMUST00000111191 PtprkP35822 1457 aa12.44□□□□□ -0.42
Cd44-205ENSMUST00000111191 Plb1Q3TTY0 1478 aa12.44□□□□□ -0.42
Cd44-205ENSMUST00000111191 Efcab5A0JP43 1406 aa12.43□□□□□ -0.42
Cd44-205ENSMUST00000111191 Crocc2F6XLV1 1638 aa12.41□□□□□ -0.42
Cd44-205ENSMUST00000111191 Shroom4Q1W617 1475 aa12.38□□□□□ -0.43
Cd44-205ENSMUST00000111191 Samd9lQ69Z37 1561 aa12.35□□□□□ -0.43
Cd44-205ENSMUST00000111191 Disp1Q3TDN0 1521 aa12.33□□□□□ -0.44
Cd44-205ENSMUST00000111191 Rapgef2Q8CHG7 1496 aa12.33□□□□□ -0.44
Cd44-205ENSMUST00000111191 Ift140E9PY46 1464 aa12.31□□□□□ -0.44
Cd44-205ENSMUST00000111191 Eif4g3Q80XI3 1579 aaKnown RBP12.3□□□□□ -0.44
Cd44-205ENSMUST00000111191 Gab3Q8BSM5 595 aa12.29□□□□□ -0.44
Cd44-205ENSMUST00000111191 Rad54l2Q99NG0 1466 aa12.26□□□□□ -0.45
Cd44-205ENSMUST00000111191 Nup160Q9Z0W3 1402 aaKnown RBP12.26□□□□□ -0.45
Cd44-205ENSMUST00000111191 Magi3Q9EQJ9 1476 aa12.26□□□□□ -0.45
Cd44-205ENSMUST00000111191 Eif4g1Q6NZJ6 1600 aaKnown RBP12.25□□□□□ -0.45
Cd44-205ENSMUST00000111191 Plppr3Q7TPB0 716 aa12.25□□□□□ -0.45
Cd44-205ENSMUST00000111191 Mroh2bQ7M6Y6 1581 aa12.24□□□□□ -0.45
Cd44-205ENSMUST00000111191 Arhgap35Q91YM2 1499 aa12.24□□□□□ -0.45
Cd44-205ENSMUST00000111191 Cep162Q6ZQ06 1403 aa12.23□□□□□ -0.45
Cd44-205ENSMUST00000111191 SynmQ70IV5 1561 aa12.22□□□□□ -0.45
Cd44-205ENSMUST00000111191 Grin2aP35436 1464 aa12.21□□□□□ -0.46
Cd44-205ENSMUST00000111191 Pla2r1Q62028 1487 aa12.21□□□□□ -0.46
Cd44-205ENSMUST00000111191 Rusc2Q80U22 1514 aa12.2□□□□□ -0.46
Cd44-205ENSMUST00000111191 Map3k1P53349 1493 aa12.19□□□□□ -0.46
Cd44-205ENSMUST00000111191 Gpatch8A2A6A1 1505 aa12.19□□□□□ -0.46
Cd44-205ENSMUST00000111191 Npm2Q80W85 207 aa12.18□□□□□ -0.46
Cd44-205ENSMUST00000111191 Cc2d2bA0A286YDU8 1405 aa12.18□□□□□ -0.46
Cd44-205ENSMUST00000111191 Setd1bQ8CFT2 1985 aa12.17□□□□□ -0.46
Cd44-205ENSMUST00000111191 Pbrm1Q8BSQ9 1634 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms