RNA–Protein interactions for RNA: ENSMUST00000111117.7

Cdc42bpa-204, Transcript of Serine/threonine-protein kinase MRCK alpha, mousemouse

TSL 1 (best) BASIC

Gene Cdc42bpa, Length 9,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42bpa-204ENSMUST00000111117 Rpgrip1Q9EPQ2 1331 aa12.35□□□□□ -0.43
Cdc42bpa-204ENSMUST00000111117 Cngb1E1AZ71 1325 aa12.1□□□□□ -0.47
Cdc42bpa-204ENSMUST00000111117 Las1lA2BE28 776 aaKnown RBP12.07□□□□□ -0.48
Cdc42bpa-204ENSMUST00000111117 Rhox8Q6VSS7 320 aa11.99□□□□□ -0.49
Cdc42bpa-204ENSMUST00000111117 Pelp1Q9DBD5 1123 aaKnown RBP11.87□□□□□ -0.51
Cdc42bpa-204ENSMUST00000111117 Rtl1Q7M732 1744 aa11.6□□□□□ -0.55
Cdc42bpa-204ENSMUST00000111117 Myt1Q8CFC2 1127 aa11.33□□□□□ -0.6
Cdc42bpa-204ENSMUST00000111117 CenpbP27790 599 aa11.28□□□□□ -0.6
Cdc42bpa-204ENSMUST00000111117 Amer1Q7TS75 1132 aa11.28□□□□□ -0.6
Cdc42bpa-204ENSMUST00000111117 Wdr66E9Q743 1299 aa11.26□□□□□ -0.61
Cdc42bpa-204ENSMUST00000111117 Ccdc180J3QNE4 1664 aa11.2□□□□□ -0.62
Cdc42bpa-204ENSMUST00000111117 4930567H17RikQ3V0K5 233 aa11.11□□□□□ -0.63
Cdc42bpa-204ENSMUST00000111117 Stra8P70278 393 aa11.06□□□□□ -0.64
Cdc42bpa-204ENSMUST00000111117 Ehmt2Q9Z148 1263 aaKnown RBP11.05□□□□□ -0.64
Cdc42bpa-204ENSMUST00000111117 Zeb1Q64318 1117 aa11.02□□□□□ -0.65
Cdc42bpa-204ENSMUST00000111117 Acin1Q9JIX8 1338 aaKnown RBP10.91□□□□□ -0.66
Cdc42bpa-204ENSMUST00000111117 NefmP08553 848 aa10.83□□□□□ -0.68
Cdc42bpa-204ENSMUST00000111117 Rtl5Q5DTT4 599 aa10.79□□□□□ -0.68
Cdc42bpa-204ENSMUST00000111117 Ube2uB1AUC4 352 aa10.77□□□□□ -0.69
Cdc42bpa-204ENSMUST00000111117 Ttbk1Q6PCN3 1308 aa10.75□□□□□ -0.69
Cdc42bpa-204ENSMUST00000111117 Tnnt3Q9QZ47 272 aa10.73□□□□□ -0.69
Cdc42bpa-204ENSMUST00000111117 4933416C03RikQ3V063 378 aa10.7□□□□□ -0.7
Cdc42bpa-204ENSMUST00000111117 DiexfQ8BTT6 772 aaKnown RBP10.65□□□□□ -0.7
Cdc42bpa-204ENSMUST00000111117 Cdk11bP24788 784 aaKnown RBP10.63□□□□□ -0.71
Cdc42bpa-204ENSMUST00000111117 NeflP08551 543 aa10.57□□□□□ -0.72
Cdc42bpa-204ENSMUST00000111117 Esf1Q3V1V3 845 aaKnown RBP10.53□□□□□ -0.72
Cdc42bpa-204ENSMUST00000111117 Trim41Q5NCC3 630 aa10.53□□□□□ -0.72
Cdc42bpa-204ENSMUST00000111117 Pcgf6Q99NA9 353 aa10.51□□□□□ -0.73
Cdc42bpa-204ENSMUST00000111117 Ccdc136Q3TVA9 1136 aa10.48□□□□□ -0.73
Cdc42bpa-204ENSMUST00000111117 Npm2Q80W85 207 aa10.48□□□□□ -0.73
Cdc42bpa-204ENSMUST00000111117 NischQ80TM9 1593 aa10.46□□□□□ -0.73
Cdc42bpa-204ENSMUST00000111117 HrcG5E8J6 738 aa10.43□□□□□ -0.74
Cdc42bpa-204ENSMUST00000111117 Slc24a1Q91WD8 1130 aa10.43□□□□□ -0.74
Cdc42bpa-204ENSMUST00000111117 Nop58Q6DFW4 536 aaKnown RBP10.42□□□□□ -0.74
Cdc42bpa-204ENSMUST00000111117 Anp32bQ9EST5 272 aaKnown RBP10.41□□□□□ -0.74
Cdc42bpa-204ENSMUST00000111117 NrdcQ8BHG1 1161 aa10.4□□□□□ -0.75
Cdc42bpa-204ENSMUST00000111117 Gab3Q8BSM5 595 aa10.39□□□□□ -0.75
Cdc42bpa-204ENSMUST00000111117 Ythdc1E9Q5K9 736 aaKnown RBP10.36□□□□□ -0.75
Cdc42bpa-204ENSMUST00000111117 Myt1lP97500 1187 aa10.32□□□□□ -0.76
Cdc42bpa-204ENSMUST00000111117 UbtfP25976 765 aaKnown RBP10.3□□□□□ -0.76
Cdc42bpa-204ENSMUST00000111117 Anp32aO35381 247 aa10.29□□□□□ -0.76
Cdc42bpa-204ENSMUST00000111117 Ccdc9Q8VC31 543 aaKnown RBP10.23□□□□□ -0.77
Cdc42bpa-204ENSMUST00000111117 Neurod1Q60867 357 aa10.22□□□□□ -0.77
Cdc42bpa-204ENSMUST00000111117 DaxxO35613 739 aa10.2□□□□□ -0.78
Cdc42bpa-204ENSMUST00000111117 NclP09405 707 aaKnown RBP10.18□□□□□ -0.78
Cdc42bpa-204ENSMUST00000111117 Eif5bQ05D44 1216 aaKnown RBP10.17□□□□□ -0.78
Cdc42bpa-204ENSMUST00000111117 TonslQ6NZL6 1363 aa10.15□□□□□ -0.78
Cdc42bpa-204ENSMUST00000111117 Supt5hO55201 1082 aaKnown RBP10.15□□□□□ -0.79
Cdc42bpa-204ENSMUST00000111117 ClspnQ80YR7 1315 aa10.1□□□□□ -0.79
Cdc42bpa-204ENSMUST00000111117 Aplp2Q06335 707 aa10.06□□□□□ -0.8
Cdc42bpa-204ENSMUST00000111117 CatipB9EKE5 520 aa10.05□□□□□ -0.8
Cdc42bpa-204ENSMUST00000111117 Anks4bQ8K3X6 423 aa10.01□□□□□ -0.81
Cdc42bpa-204ENSMUST00000111117 Hsp90aa1P07901 733 aaKnown RBP9.96□□□□□ -0.82
Cdc42bpa-204ENSMUST00000111117 Fam50aQ9WV03 339 aaKnown RBP9.95□□□□□ -0.82
Cdc42bpa-204ENSMUST00000111117 Upf2A2AT37 1269 aaKnown RBP9.95□□□□□ -0.82
Cdc42bpa-204ENSMUST00000111117 Dcaf1Q80TR8 1506 aa9.9□□□□□ -0.82
Cdc42bpa-204ENSMUST00000111117 Os9Q8K2C7 672 aa9.89□□□□□ -0.83
Cdc42bpa-204ENSMUST00000111117 Csrnp3P59055 597 aa9.88□□□□□ -0.83
Cdc42bpa-204ENSMUST00000111117 Trim44Q9QXA7 346 aa9.85□□□□□ -0.83
Cdc42bpa-204ENSMUST00000111117 Mier1Q5UAK0 511 aa9.84□□□□□ -0.83
Cdc42bpa-204ENSMUST00000111117 Calr4Q3TQS0 420 aa9.8□□□□□ -0.84
Cdc42bpa-204ENSMUST00000111117 Lmod3E9QA62 571 aa9.79□□□□□ -0.84
Cdc42bpa-204ENSMUST00000111117 Adam1bQ8R534 806 aa9.78□□□□□ -0.84
Cdc42bpa-204ENSMUST00000111117 Ppargc1bQ8VHJ7 1014 aa9.77□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Wdr43Q6ZQL4 677 aaKnown RBP9.76□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Hdac5Q9Z2V6 1113 aa9.76□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Ccdc27Q3V036 639 aa9.75□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Nlrp6Q91WS2 869 aa9.74□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Ppp4r2Q0VGB7 417 aa9.73□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Bcl11aQ9QYE3 773 aa9.73□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 Tnnt2P50752 301 aa9.73□□□□□ -0.85
Cdc42bpa-204ENSMUST00000111117 DekQ7TNV0 380 aaKnown RBP9.71□□□□□ -0.86
Cdc42bpa-204ENSMUST00000111117 Htatsf1Q8BGC0 757 aa9.71□□□□□ -0.86
Cdc42bpa-204ENSMUST00000111117 Zcchc6Q5BLK4 1491 aaKnown RBP9.7□□□□□ -0.86
Cdc42bpa-204ENSMUST00000111117 ArxO35085 564 aa9.68□□□□□ -0.86
Cdc42bpa-204ENSMUST00000111117 Irx3P81067 507 aa9.67□□□□□ -0.86
Cdc42bpa-204ENSMUST00000111117 Ap3b1Q9Z1T1 1105 aa9.67□□□□□ -0.86
Cdc42bpa-204ENSMUST00000111117 Abcc9P70170 1546 aa9.64□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 Gm38655A0A286YDK6 273 aa9.64□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 PtmaP26350 111 aa9.61□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 Polr3glQ8R0C0 218 aa9.61□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 Ccer2J3QPU5 274 aa9.6□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 CanxP35564 591 aaKnown RBP9.59□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 Fam71e1A1L3C1 212 aa9.59□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 Hsp90ab1P11499 724 aaKnown RBP9.59□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 Cep164Q5DU05 1446 aa9.59□□□□□ -0.87
Cdc42bpa-204ENSMUST00000111117 AU015836B2RUM3 263 aa9.58□□□□□ -0.88
Cdc42bpa-204ENSMUST00000111117 1700123L14RikQ3V2K7 440 aa9.57□□□□□ -0.88
Cdc42bpa-204ENSMUST00000111117 Il27Q8K3I6 234 aa9.57□□□□□ -0.88
Cdc42bpa-204ENSMUST00000111117 Sall2Q9QX96 1004 aa9.56□□□□□ -0.88
Cdc42bpa-204ENSMUST00000111117 Calcoco2A2A6M5 331 aa9.56□□□□□ -0.88
Cdc42bpa-204ENSMUST00000111117 Ppm1gQ61074 542 aa9.55□□□□□ -0.88
Cdc42bpa-204ENSMUST00000111117 Trim30dE9PWL0 497 aa9.51□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 Map7d2A2AG50 781 aa9.49□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 SetQ9EQU5 289 aaKnown RBP9.48□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 MsnP26041 577 aaKnown RBP9.48□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 4933402E13RikQ9D4D2 429 aa9.47□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 Plekhg3Q4VAC9 1341 aa9.47□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 Vsig10D3YX43 558 aa9.46□□□□□ -0.89
Cdc42bpa-204ENSMUST00000111117 Mapk8ip2Q9ERE9 830 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms