RNA–Protein interactions for RNA: ENSMUST00000110657.1

Tubgcp4-202, Transcript of Gamma-tubulin complex component 4, mousemouse

TSL 1 (best) BASIC

Gene Tubgcp4, Length 1,992 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4-202ENSMUST00000110657 NischQ80TM9 1593 aa29.58■■■□□ 2.33
Tubgcp4-202ENSMUST00000110657 Gm35339A0A140LHH9 1649 aa29.23■■■□□ 2.27
Tubgcp4-202ENSMUST00000110657 Abcc9P70170 1546 aa28.84■■■□□ 2.21
Tubgcp4-202ENSMUST00000110657 Abcc8B2RUS7 1588 aa28.06■■■□□ 2.08
Tubgcp4-202ENSMUST00000110657 Rtl1Q7M732 1744 aa28.05■■■□□ 2.08
Tubgcp4-202ENSMUST00000110657 Ccdc180J3QNE4 1664 aa27.46■■□□□ 1.99
Tubgcp4-202ENSMUST00000110657 Rhox8Q6VSS7 320 aa27.45■■□□□ 1.98
Tubgcp4-202ENSMUST00000110657 Rpgrip1Q9EPQ2 1331 aa26.8■■□□□ 1.88
Tubgcp4-202ENSMUST00000110657 Zcchc6Q5BLK4 1491 aaKnown RBP26.56■■□□□ 1.84
Tubgcp4-202ENSMUST00000110657 Dcaf1Q80TR8 1506 aa26.43■■□□□ 1.82
Tubgcp4-202ENSMUST00000110657 HrcG5E8J6 738 aa26.06■■□□□ 1.76
Tubgcp4-202ENSMUST00000110657 ScribQ80U72 1612 aa26.02■■□□□ 1.76
Tubgcp4-202ENSMUST00000110657 Rb1cc1Q9ESK9 1588 aa25.95■■□□□ 1.74
Tubgcp4-202ENSMUST00000110657 Acin1Q9JIX8 1338 aaKnown RBP25.86■■□□□ 1.73
Tubgcp4-202ENSMUST00000110657 Baz1aO88379 1555 aa25.72■■□□□ 1.71
Tubgcp4-202ENSMUST00000110657 Kdm5dQ62240 1548 aa25.56■■□□□ 1.68
Tubgcp4-202ENSMUST00000110657 NacadQ5SWP3 1504 aa25.36■■□□□ 1.65
Tubgcp4-202ENSMUST00000110657 Ccdc136Q3TVA9 1136 aa25.32■■□□□ 1.64
Tubgcp4-202ENSMUST00000110657 Crybg2B7ZCC2 1516 aa25.31■■□□□ 1.64
Tubgcp4-202ENSMUST00000110657 Smarca2Q6DIC0 1577 aa25.19■■□□□ 1.62
Tubgcp4-202ENSMUST00000110657 Trim41Q5NCC3 630 aa25.16■■□□□ 1.62
Tubgcp4-202ENSMUST00000110657 Cep164Q5DU05 1446 aa25.07■■□□□ 1.6
Tubgcp4-202ENSMUST00000110657 Ehmt2Q9Z148 1263 aaKnown RBP24.94■■□□□ 1.58
Tubgcp4-202ENSMUST00000110657 Pcgf6Q99NA9 353 aa24.82■■□□□ 1.56
Tubgcp4-202ENSMUST00000110657 Sycp2Q9CUU3 1500 aa24.78■■□□□ 1.56
Tubgcp4-202ENSMUST00000110657 Brd4Q9ESU6 1400 aaKnown RBP24.58■■□□□ 1.53
Tubgcp4-202ENSMUST00000110657 Rsf1E9PWW9 1441 aaKnown RBP24.4■■□□□ 1.5
Tubgcp4-202ENSMUST00000110657 NefmP08553 848 aa24.36■■□□□ 1.49
Tubgcp4-202ENSMUST00000110657 Golga3P55937 1487 aa24.35■■□□□ 1.49
Tubgcp4-202ENSMUST00000110657 Cecr2E9Q2Z1 1453 aa24.28■■□□□ 1.48
Tubgcp4-202ENSMUST00000110657 Cngb1E1AZ71 1325 aa24.26■■□□□ 1.47
Tubgcp4-202ENSMUST00000110657 Synj1Q8CHC4 1574 aa24.25■■□□□ 1.47
Tubgcp4-202ENSMUST00000110657 Chic1Q8CBW7 227 aa24.21■■□□□ 1.47
Tubgcp4-202ENSMUST00000110657 Supt5hO55201 1082 aaKnown RBP24.2■■□□□ 1.46
Tubgcp4-202ENSMUST00000110657 Ccdc88bQ4QRL3 1481 aa24.19■■□□□ 1.46
Tubgcp4-202ENSMUST00000110657 BicraF8VPZ9 1578 aa24.18■■□□□ 1.46
Tubgcp4-202ENSMUST00000110657 Top2bQ64511 1612 aa24.15■■□□□ 1.46
Tubgcp4-202ENSMUST00000110657 CftrP26361 1476 aa24.08■■□□□ 1.45
Tubgcp4-202ENSMUST00000110657 Cttnbp2B9EJA2 1648 aa24.04■■□□□ 1.44
Tubgcp4-202ENSMUST00000110657 Gab3Q8BSM5 595 aa24.04■■□□□ 1.44
Tubgcp4-202ENSMUST00000110657 Mier1Q5UAK0 511 aa23.93■■□□□ 1.42
Tubgcp4-202ENSMUST00000110657 Esf1Q3V1V3 845 aaKnown RBP23.85■■□□□ 1.41
Tubgcp4-202ENSMUST00000110657 Las1lA2BE28 776 aaKnown RBP23.83■■□□□ 1.41
Tubgcp4-202ENSMUST00000110657 Zeb1Q64318 1117 aa23.8■■□□□ 1.4
Tubgcp4-202ENSMUST00000110657 Smarca4Q3TKT4 1613 aaKnown RBP23.8■■□□□ 1.4
Tubgcp4-202ENSMUST00000110657 Cc2d2aQ8CFW7 1633 aa23.78■■□□□ 1.4
Tubgcp4-202ENSMUST00000110657 Neurod1Q60867 357 aa23.73■■□□□ 1.39
Tubgcp4-202ENSMUST00000110657 Rapgef2Q8CHG7 1496 aa23.73■■□□□ 1.39
Tubgcp4-202ENSMUST00000110657 Fmn1Q05860 1466 aa23.7■■□□□ 1.38
Tubgcp4-202ENSMUST00000110657 Top2aQ01320 1528 aaKnown RBP23.66■■□□□ 1.38
Tubgcp4-202ENSMUST00000110657 Sall2Q9QX96 1004 aa23.56■■□□□ 1.36
Tubgcp4-202ENSMUST00000110657 Anks4bQ8K3X6 423 aa23.49■■□□□ 1.35
Tubgcp4-202ENSMUST00000110657 Cep162Q6ZQ06 1403 aa23.47■■□□□ 1.35
Tubgcp4-202ENSMUST00000110657 Eif4g1Q6NZJ6 1600 aaKnown RBP23.41■■□□□ 1.34
Tubgcp4-202ENSMUST00000110657 Iqgap2Q3UQ44 1575 aa23.4■■□□□ 1.34
Tubgcp4-202ENSMUST00000110657 UbtfP25976 765 aaKnown RBP23.4■■□□□ 1.34
Tubgcp4-202ENSMUST00000110657 ClspnQ80YR7 1315 aa23.37■■□□□ 1.33
Tubgcp4-202ENSMUST00000110657 TnnQ80Z71 1560 aa23.3■■□□□ 1.32
Tubgcp4-202ENSMUST00000110657 Wdr66E9Q743 1299 aa23.25■■□□□ 1.31
Tubgcp4-202ENSMUST00000110657 Cdk11bP24788 784 aaKnown RBP23.22■■□□□ 1.31
Tubgcp4-202ENSMUST00000110657 Atad2bE9Q166 1460 aaKnown RBP23.21■■□□□ 1.31
Tubgcp4-202ENSMUST00000110657 TonslQ6NZL6 1363 aa23.2■■□□□ 1.3
Tubgcp4-202ENSMUST00000110657 Clip1Q922J3 1391 aa23.18■■□□□ 1.3
Tubgcp4-202ENSMUST00000110657 Npm2Q80W85 207 aa23.18■■□□□ 1.3
Tubgcp4-202ENSMUST00000110657 Myt1lP97500 1187 aa23.15■■□□□ 1.3
Tubgcp4-202ENSMUST00000110657 Nop58Q6DFW4 536 aaKnown RBP23.14■■□□□ 1.3
Tubgcp4-202ENSMUST00000110657 Aebp2Q9Z248 504 aaKnown RBP23.12■■□□□ 1.29
Tubgcp4-202ENSMUST00000110657 Ncapd3Q6ZQK0 1506 aa23.1■■□□□ 1.29
Tubgcp4-202ENSMUST00000110657 NrkQ9R0G8 1455 aa23.02■■□□□ 1.28
Tubgcp4-202ENSMUST00000110657 Ccdc18Q640L5 1455 aa23.01■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 Pds5bQ4VA53 1446 aaKnown RBP23.01■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 Aplp2Q06335 707 aa23.01■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 Arhgap35Q91YM2 1499 aa22.99■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 Eea1Q8BL66 1411 aa22.98■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 Myt1Q8CFC2 1127 aa22.98■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 Lamc3Q9R0B6 1581 aa22.96■■□□□ 1.27
Tubgcp4-202ENSMUST00000110657 1700123L14RikQ3V2K7 440 aa22.95■■□□□ 1.26
Tubgcp4-202ENSMUST00000110657 Map3k1P53349 1493 aa22.91■■□□□ 1.26
Tubgcp4-202ENSMUST00000110657 Wdr62Q3U3T8 1523 aa22.91■■□□□ 1.26
Tubgcp4-202ENSMUST00000110657 Csrnp3P59055 597 aa22.9■■□□□ 1.26
Tubgcp4-202ENSMUST00000110657 Plekhg3Q4VAC9 1341 aa22.87■■□□□ 1.25
Tubgcp4-202ENSMUST00000110657 Frmpd1A2AKB4 1549 aa22.86■■□□□ 1.25
Tubgcp4-202ENSMUST00000110657 Arhgef5E9Q7D5 1581 aa22.85■■□□□ 1.25
Tubgcp4-202ENSMUST00000110657 Arap1Q4LDD4 1452 aa22.84■■□□□ 1.25
Tubgcp4-202ENSMUST00000110657 PtprkP35822 1457 aa22.83■■□□□ 1.25
Tubgcp4-202ENSMUST00000110657 Shroom4Q1W617 1475 aa22.82■■□□□ 1.24
Tubgcp4-202ENSMUST00000110657 CenpbP27790 599 aa22.82■■□□□ 1.24
Tubgcp4-202ENSMUST00000110657 Kdm5bQ80Y84 1544 aa22.81■■□□□ 1.24
Tubgcp4-202ENSMUST00000110657 TchhA0A0B4J1F9 1599 aa22.8■■□□□ 1.24
Tubgcp4-202ENSMUST00000110657 Camsap1A2AHC3 1581 aa22.8■■□□□ 1.24
Tubgcp4-202ENSMUST00000110657 Unc13aQ4KUS2 1712 aa22.75■■□□□ 1.23
Tubgcp4-202ENSMUST00000110657 Erich3F6QRE9 1637 aa22.75■■□□□ 1.23
Tubgcp4-202ENSMUST00000110657 Setd5Q5XJV7 1441 aa22.75■■□□□ 1.23
Tubgcp4-202ENSMUST00000110657 Tiam1Q60610 1591 aa22.72■■□□□ 1.23
Tubgcp4-202ENSMUST00000110657 Tnnt3Q9QZ47 272 aa22.72■■□□□ 1.23
Tubgcp4-202ENSMUST00000110657 Baz1bQ9Z277 1479 aa22.65■■□□□ 1.22
Tubgcp4-202ENSMUST00000110657 AqrQ8CFQ3 1481 aaKnown RBP22.63■■□□□ 1.21
Tubgcp4-202ENSMUST00000110657 Mroh2bQ7M6Y6 1581 aa22.61■■□□□ 1.21
Tubgcp4-202ENSMUST00000110657 Grin2bQ01097 1482 aa22.61■■□□□ 1.21
Tubgcp4-202ENSMUST00000110657 Kif15Q6P9L6 1387 aa22.6■■□□□ 1.21
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms