RNA–Protein interactions for RNA: ENSMUST00000110530.8

Shf-202, Transcript of SH2 domain-containing adapter protein F, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shf, Length 910 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shf-202ENSMUST00000110530 Gm35339A0A140LHH9 1649 aa31.02■■■□□ 2.56
Shf-202ENSMUST00000110530 NischQ80TM9 1593 aa30.57■■■□□ 2.48
Shf-202ENSMUST00000110530 Abcc9P70170 1546 aa29.61■■■□□ 2.33
Shf-202ENSMUST00000110530 Abcc8B2RUS7 1588 aa29.59■■■□□ 2.33
Shf-202ENSMUST00000110530 ScribQ80U72 1612 aa28.53■■■□□ 2.16
Shf-202ENSMUST00000110530 NacadQ5SWP3 1504 aa27.62■■■□□ 2.01
Shf-202ENSMUST00000110530 Kdm5dQ62240 1548 aa27.58■■■□□ 2.01
Shf-202ENSMUST00000110530 Dcaf1Q80TR8 1506 aa27.25■■□□□ 1.95
Shf-202ENSMUST00000110530 Sycp2Q9CUU3 1500 aa27.09■■□□□ 1.93
Shf-202ENSMUST00000110530 BicraF8VPZ9 1578 aa26.71■■□□□ 1.87
Shf-202ENSMUST00000110530 Rb1cc1Q9ESK9 1588 aa26.63■■□□□ 1.85
Shf-202ENSMUST00000110530 Rhox8Q6VSS7 320 aa26.3■■□□□ 1.8
Shf-202ENSMUST00000110530 Baz1aO88379 1555 aa26.28■■□□□ 1.8
Shf-202ENSMUST00000110530 Ccdc180J3QNE4 1664 aa26.28■■□□□ 1.8
Shf-202ENSMUST00000110530 Crybg2B7ZCC2 1516 aa26.22■■□□□ 1.79
Shf-202ENSMUST00000110530 Pds5bQ4VA53 1446 aaKnown RBP25.95■■□□□ 1.74
Shf-202ENSMUST00000110530 Dnajc5bQ9CQ94 199 aa25.94■■□□□ 1.74
Shf-202ENSMUST00000110530 Zcchc6Q5BLK4 1491 aaKnown RBP25.85■■□□□ 1.73
Shf-202ENSMUST00000110530 Thoc2B1AZI6 1594 aaKnown RBP25.76■■□□□ 1.71
Shf-202ENSMUST00000110530 Atad2bE9Q166 1460 aaKnown RBP25.72■■□□□ 1.71
Shf-202ENSMUST00000110530 Smarca2Q6DIC0 1577 aa25.52■■□□□ 1.68
Shf-202ENSMUST00000110530 Smarca4Q3TKT4 1613 aaKnown RBP25.49■■□□□ 1.67
Shf-202ENSMUST00000110530 Cecr2E9Q2Z1 1453 aa25.43■■□□□ 1.66
Shf-202ENSMUST00000110530 Ercc6F8VPZ5 1481 aa25.37■■□□□ 1.65
Shf-202ENSMUST00000110530 Iqgap2Q3UQ44 1575 aa25.35■■□□□ 1.65
Shf-202ENSMUST00000110530 Cc2d2aQ8CFW7 1633 aa25.3■■□□□ 1.64
Shf-202ENSMUST00000110530 Fam135aQ6NS59 1506 aa25.17■■□□□ 1.62
Shf-202ENSMUST00000110530 Wdr62Q3U3T8 1523 aa25.16■■□□□ 1.62
Shf-202ENSMUST00000110530 Frmpd1A2AKB4 1549 aa25.12■■□□□ 1.61
Shf-202ENSMUST00000110530 Rtl1Q7M732 1744 aa25.02■■□□□ 1.6
Shf-202ENSMUST00000110530 Phldb1Q6PDH0 1371 aaKnown RBP24.97■■□□□ 1.59
Shf-202ENSMUST00000110530 Baz1bQ9Z277 1479 aa24.92■■□□□ 1.58
Shf-202ENSMUST00000110530 CftrP26361 1476 aa24.87■■□□□ 1.57
Shf-202ENSMUST00000110530 Cttnbp2B9EJA2 1648 aa24.81■■□□□ 1.56
Shf-202ENSMUST00000110530 Synj1Q8CHC4 1574 aa24.79■■□□□ 1.56
Shf-202ENSMUST00000110530 Brd4Q9ESU6 1400 aaKnown RBP24.78■■□□□ 1.56
Shf-202ENSMUST00000110530 Unc13aQ4KUS2 1712 aa24.73■■□□□ 1.55
Shf-202ENSMUST00000110530 Ubl4bQ9CQ84 188 aa24.69■■□□□ 1.54
Shf-202ENSMUST00000110530 Ccdc136Q3TVA9 1136 aa24.64■■□□□ 1.54
Shf-202ENSMUST00000110530 Mrc2Q64449 1479 aa24.57■■□□□ 1.52
Shf-202ENSMUST00000110530 Esf1Q3V1V3 845 aaKnown RBP24.31■■□□□ 1.48
Shf-202ENSMUST00000110530 Trim41Q5NCC3 630 aa24.29■■□□□ 1.48
Shf-202ENSMUST00000110530 Rsf1E9PWW9 1441 aaKnown RBP24.24■■□□□ 1.47
Shf-202ENSMUST00000110530 Cux2P70298 1426 aa24.18■■□□□ 1.46
Shf-202ENSMUST00000110530 Kif15Q6P9L6 1387 aa24.18■■□□□ 1.46
Shf-202ENSMUST00000110530 Lamc3Q9R0B6 1581 aa24.13■■□□□ 1.45
Shf-202ENSMUST00000110530 Lrriq1Q0P5X1 1673 aa24■■□□□ 1.43
Shf-202ENSMUST00000110530 Kif21aQ9QXL2 1672 aa23.98■■□□□ 1.43
Shf-202ENSMUST00000110530 Golga3P55937 1487 aa23.91■■□□□ 1.42
Shf-202ENSMUST00000110530 Top2bQ64511 1612 aa23.89■■□□□ 1.42
Shf-202ENSMUST00000110530 TnnQ80Z71 1560 aa23.88■■□□□ 1.41
Shf-202ENSMUST00000110530 Npm1Q61937 292 aaKnown RBP23.88■■□□□ 1.41
Shf-202ENSMUST00000110530 Cep164Q5DU05 1446 aa23.84■■□□□ 1.41
Shf-202ENSMUST00000110530 Ccdc18Q640L5 1455 aa23.75■■□□□ 1.39
Shf-202ENSMUST00000110530 Cngb1E1AZ71 1325 aa23.71■■□□□ 1.39
Shf-202ENSMUST00000110530 Camsap1A2AHC3 1581 aa23.69■■□□□ 1.38
Shf-202ENSMUST00000110530 Eif4g3Q80XI3 1579 aaKnown RBP23.68■■□□□ 1.38
Shf-202ENSMUST00000110530 Dhx29Q6PGC1 1365 aaKnown RBP23.67■■□□□ 1.38
Shf-202ENSMUST00000110530 LrpprcQ6PB66 1392 aaKnown RBP23.65■■□□□ 1.38
Shf-202ENSMUST00000110530 Fmn1Q05860 1466 aa23.64■■□□□ 1.38
Shf-202ENSMUST00000110530 Urb2E9Q7L1 1524 aaKnown RBP23.64■■□□□ 1.37
Shf-202ENSMUST00000110530 Il27Q8K3I6 234 aa23.61■■□□□ 1.37
Shf-202ENSMUST00000110530 Plb1Q3TTY0 1478 aa23.6■■□□□ 1.37
Shf-202ENSMUST00000110530 Crocc2F6XLV1 1638 aa23.55■■□□□ 1.36
Shf-202ENSMUST00000110530 PogzQ8BZH4 1409 aaKnown RBP23.51■■□□□ 1.35
Shf-202ENSMUST00000110530 Dnajc5P60904 198 aa23.46■■□□□ 1.35
Shf-202ENSMUST00000110530 Shroom2A2ALU4 1481 aa23.42■■□□□ 1.34
Shf-202ENSMUST00000110530 Ift140E9PY46 1464 aa23.41■■□□□ 1.34
Shf-202ENSMUST00000110530 Duox2A2AQ99 1517 aa23.39■■□□□ 1.34
Shf-202ENSMUST00000110530 Grin2bQ01097 1482 aa23.37■■□□□ 1.33
Shf-202ENSMUST00000110530 Rusc2Q80U22 1514 aa23.32■■□□□ 1.32
Shf-202ENSMUST00000110530 Ccdc88bQ4QRL3 1481 aa23.26■■□□□ 1.31
Shf-202ENSMUST00000110530 Disp1Q3TDN0 1521 aa23.25■■□□□ 1.31
Shf-202ENSMUST00000110530 Efcab5A0JP43 1406 aa23.24■■□□□ 1.31
Shf-202ENSMUST00000110530 Samd9lQ69Z37 1561 aa23.21■■□□□ 1.31
Shf-202ENSMUST00000110530 Top2aQ01320 1528 aaKnown RBP23.2■■□□□ 1.3
Shf-202ENSMUST00000110530 HrcG5E8J6 738 aa23.18■■□□□ 1.3
Shf-202ENSMUST00000110530 Nup160Q9Z0W3 1402 aaKnown RBP23.16■■□□□ 1.3
Shf-202ENSMUST00000110530 NrkQ9R0G8 1455 aa23.13■■□□□ 1.29
Shf-202ENSMUST00000110530 Pbrm1Q8BSQ9 1634 aaKnown RBP23.13■■□□□ 1.29
Shf-202ENSMUST00000110530 Cc2d2bA0A286YDU8 1405 aa23.11■■□□□ 1.29
Shf-202ENSMUST00000110530 Pabpn1Q8CCS6 302 aaKnown RBP23.11■■□□□ 1.29
Shf-202ENSMUST00000110530 Col17a1Q07563 1470 aa23.06■■□□□ 1.28
Shf-202ENSMUST00000110530 Chic1Q8CBW7 227 aa23.06■■□□□ 1.28
Shf-202ENSMUST00000110530 Setd1bQ8CFT2 1985 aa23.06■■□□□ 1.28
Shf-202ENSMUST00000110530 Rad54l2Q99NG0 1466 aa23.04■■□□□ 1.28
Shf-202ENSMUST00000110530 Magi3Q9EQJ9 1476 aa23.02■■□□□ 1.28
Shf-202ENSMUST00000110530 Grin2aP35436 1464 aa23.01■■□□□ 1.27
Shf-202ENSMUST00000110530 Shroom4Q1W617 1475 aa23■■□□□ 1.27
Shf-202ENSMUST00000110530 PtprkP35822 1457 aa22.98■■□□□ 1.27
Shf-202ENSMUST00000110530 AqrQ8CFQ3 1481 aaKnown RBP22.95■■□□□ 1.26
Shf-202ENSMUST00000110530 Gpatch8A2A6A1 1505 aa22.92■■□□□ 1.26
Shf-202ENSMUST00000110530 Pelp1Q9DBD5 1123 aaKnown RBP22.92■■□□□ 1.26
Shf-202ENSMUST00000110530 SynmQ70IV5 1561 aa22.88■■□□□ 1.25
Shf-202ENSMUST00000110530 Pla2r1Q62028 1487 aa22.87■■□□□ 1.25
Shf-202ENSMUST00000110530 Zcchc11B2RX14 1644 aaKnown RBP22.86■■□□□ 1.25
Shf-202ENSMUST00000110530 Fgd6Q69ZL1 1399 aa22.84■■□□□ 1.25
Shf-202ENSMUST00000110530 Mroh2bQ7M6Y6 1581 aa22.7■■□□□ 1.22
Shf-202ENSMUST00000110530 Zeb1Q64318 1117 aa22.68■■□□□ 1.22
Shf-202ENSMUST00000110530 Gapvd1Q6PAR5 1458 aa22.65■■□□□ 1.22
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms