RNA–Protein interactions for RNA: ENSMUST00000109970.4

Nkx2-2-203, Transcript of Homeobox protein Nkx-2.2, mousemouse

TSL 1 (best) BASIC

Gene Nkx2-2, Length 1,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2-203ENSMUST00000109970 Gm35339A0A140LHH9 1649 aa40.23■■■■■ 4.03
Nkx2-2-203ENSMUST00000109970 NischQ80TM9 1593 aa39.64■■■■□ 3.94
Nkx2-2-203ENSMUST00000109970 Abcc8B2RUS7 1588 aa38.39■■■■□ 3.74
Nkx2-2-203ENSMUST00000109970 Abcc9P70170 1546 aa38.35■■■■□ 3.73
Nkx2-2-203ENSMUST00000109970 ScribQ80U72 1612 aa37.21■■■■□ 3.55
Nkx2-2-203ENSMUST00000109970 NacadQ5SWP3 1504 aa35.91■■■■□ 3.34
Nkx2-2-203ENSMUST00000109970 Kdm5dQ62240 1548 aa35.91■■■■□ 3.34
Nkx2-2-203ENSMUST00000109970 Sycp2Q9CUU3 1500 aa35.25■■■■□ 3.23
Nkx2-2-203ENSMUST00000109970 Dcaf1Q80TR8 1506 aa35.21■■■■□ 3.23
Nkx2-2-203ENSMUST00000109970 BicraF8VPZ9 1578 aa34.84■■■■□ 3.17
Nkx2-2-203ENSMUST00000109970 Rb1cc1Q9ESK9 1588 aa34.57■■■■□ 3.12
Nkx2-2-203ENSMUST00000109970 Dnajc5bQ9CQ94 199 aa34.26■■■■□ 3.08
Nkx2-2-203ENSMUST00000109970 Rhox8Q6VSS7 320 aa34.1■■■■□ 3.05
Nkx2-2-203ENSMUST00000109970 Baz1aO88379 1555 aa34.02■■■■□ 3.04
Nkx2-2-203ENSMUST00000109970 Ccdc180J3QNE4 1664 aa33.85■■■■□ 3.01
Nkx2-2-203ENSMUST00000109970 Pds5bQ4VA53 1446 aaKnown RBP33.82■■■■□ 3
Nkx2-2-203ENSMUST00000109970 Crybg2B7ZCC2 1516 aa33.79■■■■□ 3
Nkx2-2-203ENSMUST00000109970 Thoc2B1AZI6 1594 aaKnown RBP33.69■■■□□ 2.98
Nkx2-2-203ENSMUST00000109970 Zcchc6Q5BLK4 1491 aaKnown RBP33.63■■■□□ 2.97
Nkx2-2-203ENSMUST00000109970 Atad2bE9Q166 1460 aaKnown RBP33.47■■■□□ 2.95
Nkx2-2-203ENSMUST00000109970 Cc2d2aQ8CFW7 1633 aa33.17■■■□□ 2.9
Nkx2-2-203ENSMUST00000109970 Ercc6F8VPZ5 1481 aa33.15■■■□□ 2.9
Nkx2-2-203ENSMUST00000109970 Smarca4Q3TKT4 1613 aaKnown RBP33.15■■■□□ 2.9
Nkx2-2-203ENSMUST00000109970 Smarca2Q6DIC0 1577 aa33.12■■■□□ 2.89
Nkx2-2-203ENSMUST00000109970 Cecr2E9Q2Z1 1453 aa33.06■■■□□ 2.88
Nkx2-2-203ENSMUST00000109970 Iqgap2Q3UQ44 1575 aa33.02■■■□□ 2.88
Nkx2-2-203ENSMUST00000109970 Fam135aQ6NS59 1506 aa32.87■■■□□ 2.85
Nkx2-2-203ENSMUST00000109970 Wdr62Q3U3T8 1523 aa32.77■■■□□ 2.84
Nkx2-2-203ENSMUST00000109970 Frmpd1A2AKB4 1549 aa32.72■■■□□ 2.83
Nkx2-2-203ENSMUST00000109970 Phldb1Q6PDH0 1371 aaKnown RBP32.54■■■□□ 2.8
Nkx2-2-203ENSMUST00000109970 Unc13aQ4KUS2 1712 aa32.31■■■□□ 2.76
Nkx2-2-203ENSMUST00000109970 Baz1bQ9Z277 1479 aa32.29■■■□□ 2.76
Nkx2-2-203ENSMUST00000109970 Ubl4bQ9CQ84 188 aa32.28■■■□□ 2.76
Nkx2-2-203ENSMUST00000109970 Rtl1Q7M732 1744 aa32.27■■■□□ 2.76
Nkx2-2-203ENSMUST00000109970 CftrP26361 1476 aa32.21■■■□□ 2.75
Nkx2-2-203ENSMUST00000109970 Synj1Q8CHC4 1574 aa32.18■■■□□ 2.74
Nkx2-2-203ENSMUST00000109970 Cttnbp2B9EJA2 1648 aa32.18■■■□□ 2.74
Nkx2-2-203ENSMUST00000109970 Mrc2Q64449 1479 aa32.1■■■□□ 2.73
Nkx2-2-203ENSMUST00000109970 Brd4Q9ESU6 1400 aaKnown RBP32.02■■■□□ 2.72
Nkx2-2-203ENSMUST00000109970 Ccdc136Q3TVA9 1136 aa31.96■■■□□ 2.71
Nkx2-2-203ENSMUST00000109970 Esf1Q3V1V3 845 aaKnown RBP31.63■■■□□ 2.65
Nkx2-2-203ENSMUST00000109970 Cux2P70298 1426 aa31.52■■■□□ 2.64
Nkx2-2-203ENSMUST00000109970 Kif15Q6P9L6 1387 aa31.5■■■□□ 2.63
Nkx2-2-203ENSMUST00000109970 Rsf1E9PWW9 1441 aaKnown RBP31.49■■■□□ 2.63
Nkx2-2-203ENSMUST00000109970 Lrriq1Q0P5X1 1673 aa31.46■■■□□ 2.63
Nkx2-2-203ENSMUST00000109970 Kif21aQ9QXL2 1672 aa31.38■■■□□ 2.61
Nkx2-2-203ENSMUST00000109970 Trim41Q5NCC3 630 aa31.37■■■□□ 2.61
Nkx2-2-203ENSMUST00000109970 Lamc3Q9R0B6 1581 aa31.31■■■□□ 2.6
Nkx2-2-203ENSMUST00000109970 Npm1Q61937 292 aaKnown RBP31.12■■■□□ 2.57
Nkx2-2-203ENSMUST00000109970 Dnajc5P60904 198 aa31.1■■■□□ 2.57
Nkx2-2-203ENSMUST00000109970 Cep164Q5DU05 1446 aa31.01■■■□□ 2.55
Nkx2-2-203ENSMUST00000109970 Eif4g3Q80XI3 1579 aaKnown RBP30.98■■■□□ 2.55
Nkx2-2-203ENSMUST00000109970 TnnQ80Z71 1560 aa30.91■■■□□ 2.54
Nkx2-2-203ENSMUST00000109970 Il27Q8K3I6 234 aa30.88■■■□□ 2.53
Nkx2-2-203ENSMUST00000109970 Top2bQ64511 1612 aa30.87■■■□□ 2.53
Nkx2-2-203ENSMUST00000109970 Golga3P55937 1487 aa30.86■■■□□ 2.53
Nkx2-2-203ENSMUST00000109970 Urb2E9Q7L1 1524 aaKnown RBP30.85■■■□□ 2.53
Nkx2-2-203ENSMUST00000109970 Dhx29Q6PGC1 1365 aaKnown RBP30.84■■■□□ 2.53
Nkx2-2-203ENSMUST00000109970 Ccdc18Q640L5 1455 aa30.82■■■□□ 2.53
Nkx2-2-203ENSMUST00000109970 Cngb1E1AZ71 1325 aa30.8■■■□□ 2.52
Nkx2-2-203ENSMUST00000109970 Plb1Q3TTY0 1478 aa30.79■■■□□ 2.52
Nkx2-2-203ENSMUST00000109970 Camsap1A2AHC3 1581 aa30.75■■■□□ 2.51
Nkx2-2-203ENSMUST00000109970 LrpprcQ6PB66 1392 aaKnown RBP30.71■■■□□ 2.51
Nkx2-2-203ENSMUST00000109970 Crocc2F6XLV1 1638 aa30.69■■■□□ 2.5
Nkx2-2-203ENSMUST00000109970 Shroom2A2ALU4 1481 aa30.67■■■□□ 2.5
Nkx2-2-203ENSMUST00000109970 Fmn1Q05860 1466 aa30.54■■■□□ 2.48
Nkx2-2-203ENSMUST00000109970 PogzQ8BZH4 1409 aaKnown RBP30.53■■■□□ 2.48
Nkx2-2-203ENSMUST00000109970 Ift140E9PY46 1464 aa30.45■■■□□ 2.47
Nkx2-2-203ENSMUST00000109970 Rusc2Q80U22 1514 aa30.44■■■□□ 2.46
Nkx2-2-203ENSMUST00000109970 Duox2A2AQ99 1517 aa30.39■■■□□ 2.46
Nkx2-2-203ENSMUST00000109970 Pabpn1Q8CCS6 302 aaKnown RBP30.33■■■□□ 2.45
Nkx2-2-203ENSMUST00000109970 Col17a1Q07563 1470 aa30.31■■■□□ 2.44
Nkx2-2-203ENSMUST00000109970 Grin2bQ01097 1482 aa30.3■■■□□ 2.44
Nkx2-2-203ENSMUST00000109970 Disp1Q3TDN0 1521 aa30.24■■■□□ 2.43
Nkx2-2-203ENSMUST00000109970 Pelp1Q9DBD5 1123 aaKnown RBP30.22■■■□□ 2.43
Nkx2-2-203ENSMUST00000109970 Samd9lQ69Z37 1561 aa30.21■■■□□ 2.43
Nkx2-2-203ENSMUST00000109970 Setd1bQ8CFT2 1985 aa30.09■■■□□ 2.41
Nkx2-2-203ENSMUST00000109970 Nup160Q9Z0W3 1402 aaKnown RBP30.09■■■□□ 2.41
Nkx2-2-203ENSMUST00000109970 Pbrm1Q8BSQ9 1634 aaKnown RBP30.06■■■□□ 2.4
Nkx2-2-203ENSMUST00000109970 Ccdc88bQ4QRL3 1481 aa30.05■■■□□ 2.4
Nkx2-2-203ENSMUST00000109970 Efcab5A0JP43 1406 aa30.04■■■□□ 2.4
Nkx2-2-203ENSMUST00000109970 Cc2d2bA0A286YDU8 1405 aa30.02■■■□□ 2.4
Nkx2-2-203ENSMUST00000109970 Rad54l2Q99NG0 1466 aa30.01■■■□□ 2.4
Nkx2-2-203ENSMUST00000109970 Top2aQ01320 1528 aaKnown RBP29.93■■■□□ 2.38
Nkx2-2-203ENSMUST00000109970 Zcchc11B2RX14 1644 aaKnown RBP29.92■■■□□ 2.38
Nkx2-2-203ENSMUST00000109970 Grin2aP35436 1464 aa29.91■■■□□ 2.38
Nkx2-2-203ENSMUST00000109970 Magi3Q9EQJ9 1476 aa29.91■■■□□ 2.38
Nkx2-2-203ENSMUST00000109970 AqrQ8CFQ3 1481 aaKnown RBP29.86■■■□□ 2.37
Nkx2-2-203ENSMUST00000109970 NrkQ9R0G8 1455 aa29.86■■■□□ 2.37
Nkx2-2-203ENSMUST00000109970 PtprkP35822 1457 aa29.8■■■□□ 2.36
Nkx2-2-203ENSMUST00000109970 Chic1Q8CBW7 227 aa29.79■■■□□ 2.36
Nkx2-2-203ENSMUST00000109970 Shroom4Q1W617 1475 aa29.76■■■□□ 2.35
Nkx2-2-203ENSMUST00000109970 Fgd6Q69ZL1 1399 aa29.76■■■□□ 2.35
Nkx2-2-203ENSMUST00000109970 Pla2r1Q62028 1487 aa29.72■■■□□ 2.35
Nkx2-2-203ENSMUST00000109970 SynmQ70IV5 1561 aa29.69■■■□□ 2.34
Nkx2-2-203ENSMUST00000109970 Adgrl3Q80TS3 1537 aa29.67■■■□□ 2.34
Nkx2-2-203ENSMUST00000109970 Cep170Q6A065 1588 aa29.65■■■□□ 2.34
Nkx2-2-203ENSMUST00000109970 Gapvd1Q6PAR5 1458 aa29.64■■■□□ 2.34
Nkx2-2-203ENSMUST00000109970 Gpatch8A2A6A1 1505 aa29.64■■■□□ 2.34
Nkx2-2-203ENSMUST00000109970 AknaQ80VW7 1404 aa29.62■■■□□ 2.33
Retrieved 100 of 22,080 RNA–protein pairs in 56.3 ms