RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm35339A0A140LHH9 1649 aa45.17■■■■■ 4.82
Ccdc88a-202ENSMUST00000109477 NischQ80TM9 1593 aa44.88■■■■■ 4.77
Ccdc88a-202ENSMUST00000109477 Abcc9P70170 1546 aa43.48■■■■■ 4.55
Ccdc88a-202ENSMUST00000109477 Abcc8B2RUS7 1588 aa43.22■■■■■ 4.51
Ccdc88a-202ENSMUST00000109477 ScribQ80U72 1612 aa41.3■■■■■ 4.2
Ccdc88a-202ENSMUST00000109477 NacadQ5SWP3 1504 aa40.09■■■■■ 4.01
Ccdc88a-202ENSMUST00000109477 Kdm5dQ62240 1548 aa40.09■■■■■ 4.01
Ccdc88a-202ENSMUST00000109477 Dcaf1Q80TR8 1506 aa39.95■■■■□ 3.99
Ccdc88a-202ENSMUST00000109477 Rhox8Q6VSS7 320 aa39.71■■■■□ 3.95
Ccdc88a-202ENSMUST00000109477 Sycp2Q9CUU3 1500 aa39.28■■■■□ 3.88
Ccdc88a-202ENSMUST00000109477 Rb1cc1Q9ESK9 1588 aa39.14■■■■□ 3.86
Ccdc88a-202ENSMUST00000109477 Ccdc180J3QNE4 1664 aa38.71■■■■□ 3.79
Ccdc88a-202ENSMUST00000109477 BicraF8VPZ9 1578 aa38.65■■■■□ 3.78
Ccdc88a-202ENSMUST00000109477 Baz1aO88379 1555 aa38.64■■■■□ 3.78
Ccdc88a-202ENSMUST00000109477 Crybg2B7ZCC2 1516 aa38.43■■■■□ 3.74
Ccdc88a-202ENSMUST00000109477 Rtl1Q7M732 1744 aa38.42■■■■□ 3.74
Ccdc88a-202ENSMUST00000109477 Zcchc6Q5BLK4 1491 aaKnown RBP37.98■■■■□ 3.67
Ccdc88a-202ENSMUST00000109477 Smarca2Q6DIC0 1577 aa37.58■■■■□ 3.61
Ccdc88a-202ENSMUST00000109477 Pds5bQ4VA53 1446 aaKnown RBP37.42■■■■□ 3.58
Ccdc88a-202ENSMUST00000109477 Cecr2E9Q2Z1 1453 aa37.25■■■■□ 3.55
Ccdc88a-202ENSMUST00000109477 Atad2bE9Q166 1460 aaKnown RBP37.21■■■■□ 3.55
Ccdc88a-202ENSMUST00000109477 Smarca4Q3TKT4 1613 aaKnown RBP37.12■■■■□ 3.53
Ccdc88a-202ENSMUST00000109477 Ccdc136Q3TVA9 1136 aa36.93■■■■□ 3.5
Ccdc88a-202ENSMUST00000109477 Thoc2B1AZI6 1594 aaKnown RBP36.86■■■■□ 3.49
Ccdc88a-202ENSMUST00000109477 Iqgap2Q3UQ44 1575 aa36.83■■■■□ 3.49
Ccdc88a-202ENSMUST00000109477 Dnajc5bQ9CQ94 199 aa36.74■■■■□ 3.47
Ccdc88a-202ENSMUST00000109477 Ercc6F8VPZ5 1481 aa36.62■■■■□ 3.45
Ccdc88a-202ENSMUST00000109477 Brd4Q9ESU6 1400 aaKnown RBP36.56■■■■□ 3.44
Ccdc88a-202ENSMUST00000109477 CftrP26361 1476 aa36.51■■■■□ 3.43
Ccdc88a-202ENSMUST00000109477 Synj1Q8CHC4 1574 aa36.48■■■■□ 3.43
Ccdc88a-202ENSMUST00000109477 Trim41Q5NCC3 630 aa36.45■■■■□ 3.43
Ccdc88a-202ENSMUST00000109477 Wdr62Q3U3T8 1523 aa36.43■■■■□ 3.42
Ccdc88a-202ENSMUST00000109477 Frmpd1A2AKB4 1549 aa36.4■■■■□ 3.42
Ccdc88a-202ENSMUST00000109477 Cttnbp2B9EJA2 1648 aa36.4■■■■□ 3.42
Ccdc88a-202ENSMUST00000109477 Cc2d2aQ8CFW7 1633 aa36.32■■■■□ 3.4
Ccdc88a-202ENSMUST00000109477 Fam135aQ6NS59 1506 aa36.16■■■■□ 3.38
Ccdc88a-202ENSMUST00000109477 Phldb1Q6PDH0 1371 aaKnown RBP36.06■■■■□ 3.36
Ccdc88a-202ENSMUST00000109477 Esf1Q3V1V3 845 aaKnown RBP35.89■■■■□ 3.34
Ccdc88a-202ENSMUST00000109477 Unc13aQ4KUS2 1712 aa35.89■■■■□ 3.34
Ccdc88a-202ENSMUST00000109477 Ubl4bQ9CQ84 188 aa35.72■■■■□ 3.31
Ccdc88a-202ENSMUST00000109477 Baz1bQ9Z277 1479 aa35.72■■■■□ 3.31
Ccdc88a-202ENSMUST00000109477 Golga3P55937 1487 aa35.66■■■■□ 3.3
Ccdc88a-202ENSMUST00000109477 HrcG5E8J6 738 aa35.6■■■■□ 3.29
Ccdc88a-202ENSMUST00000109477 Top2bQ64511 1612 aa35.52■■■■□ 3.28
Ccdc88a-202ENSMUST00000109477 Cngb1E1AZ71 1325 aa35.5■■■■□ 3.27
Ccdc88a-202ENSMUST00000109477 Rsf1E9PWW9 1441 aaKnown RBP35.41■■■■□ 3.26
Ccdc88a-202ENSMUST00000109477 Mrc2Q64449 1479 aa35.32■■■■□ 3.24
Ccdc88a-202ENSMUST00000109477 Kif15Q6P9L6 1387 aa35.31■■■■□ 3.24
Ccdc88a-202ENSMUST00000109477 Lamc3Q9R0B6 1581 aa35.28■■■■□ 3.24
Ccdc88a-202ENSMUST00000109477 Cux2P70298 1426 aa35.14■■■■□ 3.22
Ccdc88a-202ENSMUST00000109477 TnnQ80Z71 1560 aa35.06■■■■□ 3.2
Ccdc88a-202ENSMUST00000109477 Cep164Q5DU05 1446 aa35.04■■■■□ 3.2
Ccdc88a-202ENSMUST00000109477 Ccdc88bQ4QRL3 1481 aa35.03■■■■□ 3.2
Ccdc88a-202ENSMUST00000109477 Fmn1Q05860 1466 aa35.02■■■■□ 3.2
Ccdc88a-202ENSMUST00000109477 Chic1Q8CBW7 227 aa34.9■■■■□ 3.18
Ccdc88a-202ENSMUST00000109477 Npm1Q61937 292 aaKnown RBP34.82■■■■□ 3.16
Ccdc88a-202ENSMUST00000109477 Ccdc18Q640L5 1455 aa34.74■■■■□ 3.15
Ccdc88a-202ENSMUST00000109477 Camsap1A2AHC3 1581 aa34.71■■■■□ 3.15
Ccdc88a-202ENSMUST00000109477 Kif21aQ9QXL2 1672 aa34.7■■■■□ 3.14
Ccdc88a-202ENSMUST00000109477 Il27Q8K3I6 234 aa34.67■■■■□ 3.14
Ccdc88a-202ENSMUST00000109477 Top2aQ01320 1528 aaKnown RBP34.62■■■■□ 3.13
Ccdc88a-202ENSMUST00000109477 LrpprcQ6PB66 1392 aaKnown RBP34.52■■■■□ 3.12
Ccdc88a-202ENSMUST00000109477 Lrriq1Q0P5X1 1673 aa34.49■■■■□ 3.11
Ccdc88a-202ENSMUST00000109477 Dhx29Q6PGC1 1365 aaKnown RBP34.45■■■■□ 3.11
Ccdc88a-202ENSMUST00000109477 PogzQ8BZH4 1409 aaKnown RBP34.35■■■■□ 3.09
Ccdc88a-202ENSMUST00000109477 Grin2bQ01097 1482 aa34.32■■■■□ 3.08
Ccdc88a-202ENSMUST00000109477 Gab3Q8BSM5 595 aa34.3■■■■□ 3.08
Ccdc88a-202ENSMUST00000109477 Crocc2F6XLV1 1638 aa34.25■■■■□ 3.07
Ccdc88a-202ENSMUST00000109477 Urb2E9Q7L1 1524 aaKnown RBP34.23■■■■□ 3.07
Ccdc88a-202ENSMUST00000109477 Plb1Q3TTY0 1478 aa34.22■■■■□ 3.07
Ccdc88a-202ENSMUST00000109477 Duox2A2AQ99 1517 aa34.2■■■■□ 3.07
Ccdc88a-202ENSMUST00000109477 NrkQ9R0G8 1455 aa34.1■■■■□ 3.05
Ccdc88a-202ENSMUST00000109477 Rapgef2Q8CHG7 1496 aa34.09■■■■□ 3.05
Ccdc88a-202ENSMUST00000109477 Efcab5A0JP43 1406 aa34.08■■■■□ 3.05
Ccdc88a-202ENSMUST00000109477 Eif4g3Q80XI3 1579 aaKnown RBP34■■■■□ 3.03
Ccdc88a-202ENSMUST00000109477 PtprkP35822 1457 aa33.97■■■■□ 3.03
Ccdc88a-202ENSMUST00000109477 Shroom4Q1W617 1475 aa33.96■■■■□ 3.03
Ccdc88a-202ENSMUST00000109477 Ift140E9PY46 1464 aa33.93■■■■□ 3.02
Ccdc88a-202ENSMUST00000109477 Samd9lQ69Z37 1561 aa33.93■■■■□ 3.02
Ccdc88a-202ENSMUST00000109477 Npm2Q80W85 207 aa33.83■■■■□ 3.01
Ccdc88a-202ENSMUST00000109477 Disp1Q3TDN0 1521 aa33.83■■■■□ 3.01
Ccdc88a-202ENSMUST00000109477 Cep162Q6ZQ06 1403 aa33.81■■■■□ 3
Ccdc88a-202ENSMUST00000109477 Eif4g1Q6NZJ6 1600 aaKnown RBP33.79■■■■□ 3
Ccdc88a-202ENSMUST00000109477 Rad54l2Q99NG0 1466 aa33.72■■■□□ 2.99
Ccdc88a-202ENSMUST00000109477 Rusc2Q80U22 1514 aa33.66■■■□□ 2.98
Ccdc88a-202ENSMUST00000109477 Nup160Q9Z0W3 1402 aaKnown RBP33.65■■■□□ 2.98
Ccdc88a-202ENSMUST00000109477 Pbrm1Q8BSQ9 1634 aaKnown RBP33.62■■■□□ 2.97
Ccdc88a-202ENSMUST00000109477 Arhgap35Q91YM2 1499 aa33.61■■■□□ 2.97
Ccdc88a-202ENSMUST00000109477 Setd1bQ8CFT2 1985 aa33.6■■■□□ 2.97
Ccdc88a-202ENSMUST00000109477 Magi3Q9EQJ9 1476 aa33.59■■■□□ 2.97
Ccdc88a-202ENSMUST00000109477 SynmQ70IV5 1561 aa33.59■■■□□ 2.97
Ccdc88a-202ENSMUST00000109477 Grin2aP35436 1464 aa33.56■■■□□ 2.96
Ccdc88a-202ENSMUST00000109477 Mroh2bQ7M6Y6 1581 aa33.54■■■□□ 2.96
Ccdc88a-202ENSMUST00000109477 Map3k1P53349 1493 aa33.54■■■□□ 2.96
Ccdc88a-202ENSMUST00000109477 Cc2d2bA0A286YDU8 1405 aa33.54■■■□□ 2.96
Ccdc88a-202ENSMUST00000109477 Zeb1Q64318 1117 aa33.54■■■□□ 2.96
Ccdc88a-202ENSMUST00000109477 Pla2r1Q62028 1487 aa33.47■■■□□ 2.95
Ccdc88a-202ENSMUST00000109477 Myt1lP97500 1187 aa33.45■■■□□ 2.95
Ccdc88a-202ENSMUST00000109477 Gpatch8A2A6A1 1505 aa33.38■■■□□ 2.93
Ccdc88a-202ENSMUST00000109477 AqrQ8CFQ3 1481 aaKnown RBP33.34■■■□□ 2.93
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