RNA–Protein interactions for RNA: ENSMUST00000109077.8

Cdkl3-204, Transcript of Cyclin-dependent kinase-like 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cdkl3, Length 2,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3-204ENSMUST00000109077 NischQ80TM9 1593 aa37.64■■■■□ 3.62
Cdkl3-204ENSMUST00000109077 Gm35339A0A140LHH9 1649 aa36.72■■■■□ 3.47
Cdkl3-204ENSMUST00000109077 Abcc9P70170 1546 aa36.52■■■■□ 3.44
Cdkl3-204ENSMUST00000109077 Abcc8B2RUS7 1588 aa35.64■■■■□ 3.3
Cdkl3-204ENSMUST00000109077 Rhox8Q6VSS7 320 aa35.36■■■■□ 3.25
Cdkl3-204ENSMUST00000109077 Rtl1Q7M732 1744 aa34.78■■■■□ 3.16
Cdkl3-204ENSMUST00000109077 Ccdc180J3QNE4 1664 aa34.28■■■■□ 3.08
Cdkl3-204ENSMUST00000109077 Zcchc6Q5BLK4 1491 aaKnown RBP33.6■■■□□ 2.97
Cdkl3-204ENSMUST00000109077 Dcaf1Q80TR8 1506 aa33.17■■■□□ 2.9
Cdkl3-204ENSMUST00000109077 ScribQ80U72 1612 aa33.11■■■□□ 2.89
Cdkl3-204ENSMUST00000109077 Rb1cc1Q9ESK9 1588 aa33.01■■■□□ 2.87
Cdkl3-204ENSMUST00000109077 Rpgrip1Q9EPQ2 1331 aa32.89■■■□□ 2.85
Cdkl3-204ENSMUST00000109077 Ccdc136Q3TVA9 1136 aa32.8■■■□□ 2.84
Cdkl3-204ENSMUST00000109077 HrcG5E8J6 738 aa32.69■■■□□ 2.82
Cdkl3-204ENSMUST00000109077 Baz1aO88379 1555 aa32.59■■■□□ 2.81
Cdkl3-204ENSMUST00000109077 Kdm5dQ62240 1548 aa32.57■■■□□ 2.8
Cdkl3-204ENSMUST00000109077 Acin1Q9JIX8 1338 aaKnown RBP32.44■■■□□ 2.78
Cdkl3-204ENSMUST00000109077 Ehmt2Q9Z148 1263 aaKnown RBP32.44■■■□□ 2.78
Cdkl3-204ENSMUST00000109077 NacadQ5SWP3 1504 aa32.21■■■□□ 2.75
Cdkl3-204ENSMUST00000109077 Trim41Q5NCC3 630 aa32.11■■■□□ 2.73
Cdkl3-204ENSMUST00000109077 Smarca2Q6DIC0 1577 aa31.88■■■□□ 2.69
Cdkl3-204ENSMUST00000109077 Crybg2B7ZCC2 1516 aa31.82■■■□□ 2.68
Cdkl3-204ENSMUST00000109077 Cep164Q5DU05 1446 aa31.64■■■□□ 2.66
Cdkl3-204ENSMUST00000109077 Sycp2Q9CUU3 1500 aa31.52■■■□□ 2.64
Cdkl3-204ENSMUST00000109077 Cngb1E1AZ71 1325 aa31.32■■■□□ 2.6
Cdkl3-204ENSMUST00000109077 Pcgf6Q99NA9 353 aa31.29■■■□□ 2.6
Cdkl3-204ENSMUST00000109077 Chic1Q8CBW7 227 aa31.26■■■□□ 2.59
Cdkl3-204ENSMUST00000109077 Rsf1E9PWW9 1441 aaKnown RBP31.23■■■□□ 2.59
Cdkl3-204ENSMUST00000109077 Brd4Q9ESU6 1400 aaKnown RBP31.16■■■□□ 2.58
Cdkl3-204ENSMUST00000109077 Cecr2E9Q2Z1 1453 aa31.15■■■□□ 2.58
Cdkl3-204ENSMUST00000109077 Gab3Q8BSM5 595 aa31.14■■■□□ 2.58
Cdkl3-204ENSMUST00000109077 Ccdc88bQ4QRL3 1481 aa30.99■■■□□ 2.55
Cdkl3-204ENSMUST00000109077 Golga3P55937 1487 aa30.96■■■□□ 2.55
Cdkl3-204ENSMUST00000109077 Synj1Q8CHC4 1574 aa30.93■■■□□ 2.54
Cdkl3-204ENSMUST00000109077 BicraF8VPZ9 1578 aa30.82■■■□□ 2.52
Cdkl3-204ENSMUST00000109077 Supt5hO55201 1082 aaKnown RBP30.79■■■□□ 2.52
Cdkl3-204ENSMUST00000109077 Esf1Q3V1V3 845 aaKnown RBP30.71■■■□□ 2.51
Cdkl3-204ENSMUST00000109077 CftrP26361 1476 aa30.67■■■□□ 2.5
Cdkl3-204ENSMUST00000109077 Top2bQ64511 1612 aa30.52■■■□□ 2.48
Cdkl3-204ENSMUST00000109077 Mier1Q5UAK0 511 aa30.52■■■□□ 2.48
Cdkl3-204ENSMUST00000109077 Zeb1Q64318 1117 aa30.43■■■□□ 2.46
Cdkl3-204ENSMUST00000109077 Cttnbp2B9EJA2 1648 aa30.43■■■□□ 2.46
Cdkl3-204ENSMUST00000109077 NefmP08553 848 aa30.4■■■□□ 2.46
Cdkl3-204ENSMUST00000109077 Cc2d2aQ8CFW7 1633 aa30.31■■■□□ 2.44
Cdkl3-204ENSMUST00000109077 Smarca4Q3TKT4 1613 aaKnown RBP30.23■■■□□ 2.43
Cdkl3-204ENSMUST00000109077 Rapgef2Q8CHG7 1496 aa30.11■■■□□ 2.41
Cdkl3-204ENSMUST00000109077 UbtfP25976 765 aaKnown RBP30.06■■■□□ 2.4
Cdkl3-204ENSMUST00000109077 Fmn1Q05860 1466 aa30.04■■■□□ 2.4
Cdkl3-204ENSMUST00000109077 Neurod1Q60867 357 aa30.02■■■□□ 2.4
Cdkl3-204ENSMUST00000109077 Sall2Q9QX96 1004 aa29.98■■■□□ 2.39
Cdkl3-204ENSMUST00000109077 Top2aQ01320 1528 aaKnown RBP29.98■■■□□ 2.39
Cdkl3-204ENSMUST00000109077 Myt1lP97500 1187 aa29.93■■■□□ 2.38
Cdkl3-204ENSMUST00000109077 Cep162Q6ZQ06 1403 aa29.89■■■□□ 2.38
Cdkl3-204ENSMUST00000109077 Iqgap2Q3UQ44 1575 aa29.81■■■□□ 2.36
Cdkl3-204ENSMUST00000109077 Npm2Q80W85 207 aa29.75■■■□□ 2.35
Cdkl3-204ENSMUST00000109077 Las1lA2BE28 776 aaKnown RBP29.64■■■□□ 2.34
Cdkl3-204ENSMUST00000109077 Aebp2Q9Z248 504 aaKnown RBP29.62■■■□□ 2.33
Cdkl3-204ENSMUST00000109077 Wdr66E9Q743 1299 aa29.6■■■□□ 2.33
Cdkl3-204ENSMUST00000109077 Clip1Q922J3 1391 aa29.55■■■□□ 2.32
Cdkl3-204ENSMUST00000109077 Atad2bE9Q166 1460 aaKnown RBP29.54■■■□□ 2.32
Cdkl3-204ENSMUST00000109077 Plekhg3Q4VAC9 1341 aa29.52■■■□□ 2.32
Cdkl3-204ENSMUST00000109077 Eif4g1Q6NZJ6 1600 aaKnown RBP29.52■■■□□ 2.32
Cdkl3-204ENSMUST00000109077 TnnQ80Z71 1560 aa29.41■■■□□ 2.3
Cdkl3-204ENSMUST00000109077 ClspnQ80YR7 1315 aa29.34■■■□□ 2.29
Cdkl3-204ENSMUST00000109077 Ppargc1bQ8VHJ7 1014 aa29.33■■■□□ 2.29
Cdkl3-204ENSMUST00000109077 TonslQ6NZL6 1363 aa29.33■■■□□ 2.29
Cdkl3-204ENSMUST00000109077 Pds5bQ4VA53 1446 aaKnown RBP29.32■■■□□ 2.28
Cdkl3-204ENSMUST00000109077 Arhgap35Q91YM2 1499 aa29.3■■■□□ 2.28
Cdkl3-204ENSMUST00000109077 PtprkP35822 1457 aa29.28■■■□□ 2.28
Cdkl3-204ENSMUST00000109077 Ncapd3Q6ZQK0 1506 aa29.28■■■□□ 2.28
Cdkl3-204ENSMUST00000109077 Anks4bQ8K3X6 423 aa29.28■■■□□ 2.28
Cdkl3-204ENSMUST00000109077 Il27Q8K3I6 234 aa29.21■■■□□ 2.27
Cdkl3-204ENSMUST00000109077 Frmpd1A2AKB4 1549 aa29.21■■■□□ 2.27
Cdkl3-204ENSMUST00000109077 NrkQ9R0G8 1455 aa29.17■■■□□ 2.26
Cdkl3-204ENSMUST00000109077 Ap3b1Q9Z1T1 1105 aa29.15■■■□□ 2.26
Cdkl3-204ENSMUST00000109077 Arap1Q4LDD4 1452 aa29.14■■■□□ 2.26
Cdkl3-204ENSMUST00000109077 Wdr62Q3U3T8 1523 aa29.13■■■□□ 2.25
Cdkl3-204ENSMUST00000109077 Nop58Q6DFW4 536 aaKnown RBP29.13■■■□□ 2.25
Cdkl3-204ENSMUST00000109077 Eea1Q8BL66 1411 aa29.13■■■□□ 2.25
Cdkl3-204ENSMUST00000109077 Cdk11bP24788 784 aaKnown RBP29.12■■■□□ 2.25
Cdkl3-204ENSMUST00000109077 Lamc3Q9R0B6 1581 aa29.1■■■□□ 2.25
Cdkl3-204ENSMUST00000109077 Kif15Q6P9L6 1387 aa29.08■■■□□ 2.25
Cdkl3-204ENSMUST00000109077 Csrnp3P59055 597 aa29.04■■■□□ 2.24
Cdkl3-204ENSMUST00000109077 Setd5Q5XJV7 1441 aa29.02■■■□□ 2.24
Cdkl3-204ENSMUST00000109077 Shroom4Q1W617 1475 aa29.01■■■□□ 2.23
Cdkl3-204ENSMUST00000109077 Arhgef5E9Q7D5 1581 aa28.99■■■□□ 2.23
Cdkl3-204ENSMUST00000109077 Camsap1A2AHC3 1581 aa28.95■■■□□ 2.22
Cdkl3-204ENSMUST00000109077 Eid3Q3V124 375 aa28.91■■■□□ 2.22
Cdkl3-204ENSMUST00000109077 Ccdc18Q640L5 1455 aa28.91■■■□□ 2.22
Cdkl3-204ENSMUST00000109077 Map3k1P53349 1493 aa28.9■■■□□ 2.22
Cdkl3-204ENSMUST00000109077 1700123L14RikQ3V2K7 440 aa28.9■■■□□ 2.22
Cdkl3-204ENSMUST00000109077 Unc13aQ4KUS2 1712 aa28.89■■■□□ 2.22
Cdkl3-204ENSMUST00000109077 Kdm5bQ80Y84 1544 aa28.86■■■□□ 2.21
Cdkl3-204ENSMUST00000109077 Ercc6F8VPZ5 1481 aa28.85■■■□□ 2.21
Cdkl3-204ENSMUST00000109077 Grin2bQ01097 1482 aa28.8■■■□□ 2.2
Cdkl3-204ENSMUST00000109077 Tiam1Q60610 1591 aa28.8■■■□□ 2.2
Cdkl3-204ENSMUST00000109077 Mroh2bQ7M6Y6 1581 aa28.76■■■□□ 2.19
Cdkl3-204ENSMUST00000109077 BlmO88700 1416 aa28.73■■■□□ 2.19
Cdkl3-204ENSMUST00000109077 AqrQ8CFQ3 1481 aaKnown RBP28.73■■■□□ 2.19
Cdkl3-204ENSMUST00000109077 Baz1bQ9Z277 1479 aa28.73■■■□□ 2.19
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms