RNA–Protein interactions for RNA: ENSMUST00000108228.7

Usp13-202, Transcript of Ubiquitin carboxyl-terminal hydrolase 13, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp13, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp13-202ENSMUST00000108228 NischQ80TM9 1593 aa33.39■■■□□ 2.94
Usp13-202ENSMUST00000108228 Gm35339A0A140LHH9 1649 aa32.64■■■□□ 2.82
Usp13-202ENSMUST00000108228 Abcc9P70170 1546 aa32.46■■■□□ 2.79
Usp13-202ENSMUST00000108228 Abcc8B2RUS7 1588 aa31.63■■■□□ 2.65
Usp13-202ENSMUST00000108228 Rhox8Q6VSS7 320 aa31.25■■■□□ 2.59
Usp13-202ENSMUST00000108228 Rtl1Q7M732 1744 aa31.11■■■□□ 2.57
Usp13-202ENSMUST00000108228 Ccdc180J3QNE4 1664 aa30.64■■■□□ 2.5
Usp13-202ENSMUST00000108228 Zcchc6Q5BLK4 1491 aaKnown RBP29.98■■■□□ 2.39
Usp13-202ENSMUST00000108228 Rpgrip1Q9EPQ2 1331 aa29.61■■■□□ 2.33
Usp13-202ENSMUST00000108228 Dcaf1Q80TR8 1506 aa29.59■■■□□ 2.33
Usp13-202ENSMUST00000108228 ScribQ80U72 1612 aa29.29■■■□□ 2.28
Usp13-202ENSMUST00000108228 Rb1cc1Q9ESK9 1588 aa29.27■■■□□ 2.28
Usp13-202ENSMUST00000108228 HrcG5E8J6 738 aa29.2■■■□□ 2.27
Usp13-202ENSMUST00000108228 Acin1Q9JIX8 1338 aaKnown RBP29.05■■■□□ 2.24
Usp13-202ENSMUST00000108228 Ccdc136Q3TVA9 1136 aa28.96■■■□□ 2.23
Usp13-202ENSMUST00000108228 Baz1aO88379 1555 aa28.96■■■□□ 2.23
Usp13-202ENSMUST00000108228 Kdm5dQ62240 1548 aa28.84■■■□□ 2.21
Usp13-202ENSMUST00000108228 Ehmt2Q9Z148 1263 aaKnown RBP28.69■■■□□ 2.18
Usp13-202ENSMUST00000108228 NacadQ5SWP3 1504 aa28.56■■■□□ 2.16
Usp13-202ENSMUST00000108228 Trim41Q5NCC3 630 aa28.49■■■□□ 2.15
Usp13-202ENSMUST00000108228 Crybg2B7ZCC2 1516 aa28.37■■■□□ 2.13
Usp13-202ENSMUST00000108228 Smarca2Q6DIC0 1577 aa28.34■■■□□ 2.13
Usp13-202ENSMUST00000108228 Cep164Q5DU05 1446 aa28.22■■■□□ 2.11
Usp13-202ENSMUST00000108228 Pcgf6Q99NA9 353 aa28.01■■■□□ 2.07
Usp13-202ENSMUST00000108228 Sycp2Q9CUU3 1500 aa27.93■■■□□ 2.06
Usp13-202ENSMUST00000108228 Rsf1E9PWW9 1441 aaKnown RBP27.74■■■□□ 2.03
Usp13-202ENSMUST00000108228 Chic1Q8CBW7 227 aa27.69■■■□□ 2.02
Usp13-202ENSMUST00000108228 Brd4Q9ESU6 1400 aaKnown RBP27.69■■■□□ 2.02
Usp13-202ENSMUST00000108228 Cngb1E1AZ71 1325 aa27.65■■■□□ 2.02
Usp13-202ENSMUST00000108228 Cecr2E9Q2Z1 1453 aa27.57■■■□□ 2
Usp13-202ENSMUST00000108228 Golga3P55937 1487 aa27.52■■■□□ 2
Usp13-202ENSMUST00000108228 Ccdc88bQ4QRL3 1481 aa27.5■■□□□ 1.99
Usp13-202ENSMUST00000108228 Gab3Q8BSM5 595 aa27.5■■□□□ 1.99
Usp13-202ENSMUST00000108228 Supt5hO55201 1082 aaKnown RBP27.48■■□□□ 1.99
Usp13-202ENSMUST00000108228 Synj1Q8CHC4 1574 aa27.41■■□□□ 1.98
Usp13-202ENSMUST00000108228 BicraF8VPZ9 1578 aa27.27■■□□□ 1.96
Usp13-202ENSMUST00000108228 CftrP26361 1476 aa27.22■■□□□ 1.95
Usp13-202ENSMUST00000108228 NefmP08553 848 aa27.19■■□□□ 1.94
Usp13-202ENSMUST00000108228 Mier1Q5UAK0 511 aa27.15■■□□□ 1.94
Usp13-202ENSMUST00000108228 Top2bQ64511 1612 aa27.15■■□□□ 1.94
Usp13-202ENSMUST00000108228 Esf1Q3V1V3 845 aaKnown RBP27.09■■□□□ 1.93
Usp13-202ENSMUST00000108228 Zeb1Q64318 1117 aa27.04■■□□□ 1.92
Usp13-202ENSMUST00000108228 Cttnbp2B9EJA2 1648 aa27.01■■□□□ 1.91
Usp13-202ENSMUST00000108228 Neurod1Q60867 357 aa26.87■■□□□ 1.89
Usp13-202ENSMUST00000108228 Cc2d2aQ8CFW7 1633 aa26.85■■□□□ 1.89
Usp13-202ENSMUST00000108228 Rapgef2Q8CHG7 1496 aa26.81■■□□□ 1.88
Usp13-202ENSMUST00000108228 Smarca4Q3TKT4 1613 aaKnown RBP26.79■■□□□ 1.88
Usp13-202ENSMUST00000108228 Sall2Q9QX96 1004 aa26.74■■□□□ 1.87
Usp13-202ENSMUST00000108228 Fmn1Q05860 1466 aa26.72■■□□□ 1.87
Usp13-202ENSMUST00000108228 Top2aQ01320 1528 aaKnown RBP26.67■■□□□ 1.86
Usp13-202ENSMUST00000108228 UbtfP25976 765 aaKnown RBP26.63■■□□□ 1.85
Usp13-202ENSMUST00000108228 Cep162Q6ZQ06 1403 aa26.58■■□□□ 1.85
Usp13-202ENSMUST00000108228 Las1lA2BE28 776 aaKnown RBP26.42■■□□□ 1.82
Usp13-202ENSMUST00000108228 Myt1lP97500 1187 aa26.42■■□□□ 1.82
Usp13-202ENSMUST00000108228 Iqgap2Q3UQ44 1575 aa26.39■■□□□ 1.81
Usp13-202ENSMUST00000108228 Aebp2Q9Z248 504 aaKnown RBP26.36■■□□□ 1.81
Usp13-202ENSMUST00000108228 Eif4g1Q6NZJ6 1600 aaKnown RBP26.31■■□□□ 1.8
Usp13-202ENSMUST00000108228 Wdr66E9Q743 1299 aa26.3■■□□□ 1.8
Usp13-202ENSMUST00000108228 Npm2Q80W85 207 aa26.29■■□□□ 1.8
Usp13-202ENSMUST00000108228 Anks4bQ8K3X6 423 aa26.29■■□□□ 1.8
Usp13-202ENSMUST00000108228 Clip1Q922J3 1391 aa26.24■■□□□ 1.79
Usp13-202ENSMUST00000108228 ClspnQ80YR7 1315 aa26.23■■□□□ 1.79
Usp13-202ENSMUST00000108228 Atad2bE9Q166 1460 aaKnown RBP26.17■■□□□ 1.78
Usp13-202ENSMUST00000108228 TnnQ80Z71 1560 aa26.16■■□□□ 1.78
Usp13-202ENSMUST00000108228 TonslQ6NZL6 1363 aa26.13■■□□□ 1.77
Usp13-202ENSMUST00000108228 Plekhg3Q4VAC9 1341 aa26.13■■□□□ 1.77
Usp13-202ENSMUST00000108228 Ncapd3Q6ZQK0 1506 aa26.11■■□□□ 1.77
Usp13-202ENSMUST00000108228 Arhgap35Q91YM2 1499 aa26.04■■□□□ 1.76
Usp13-202ENSMUST00000108228 Cdk11bP24788 784 aaKnown RBP26.03■■□□□ 1.76
Usp13-202ENSMUST00000108228 Nop58Q6DFW4 536 aaKnown RBP26.02■■□□□ 1.76
Usp13-202ENSMUST00000108228 NrkQ9R0G8 1455 aa25.96■■□□□ 1.75
Usp13-202ENSMUST00000108228 Pds5bQ4VA53 1446 aaKnown RBP25.95■■□□□ 1.75
Usp13-202ENSMUST00000108228 Csrnp3P59055 597 aa25.95■■□□□ 1.74
Usp13-202ENSMUST00000108228 PtprkP35822 1457 aa25.95■■□□□ 1.74
Usp13-202ENSMUST00000108228 Ppargc1bQ8VHJ7 1014 aa25.93■■□□□ 1.74
Usp13-202ENSMUST00000108228 1700123L14RikQ3V2K7 440 aa25.91■■□□□ 1.74
Usp13-202ENSMUST00000108228 Eea1Q8BL66 1411 aa25.91■■□□□ 1.74
Usp13-202ENSMUST00000108228 Arap1Q4LDD4 1452 aa25.9■■□□□ 1.74
Usp13-202ENSMUST00000108228 Frmpd1A2AKB4 1549 aa25.84■■□□□ 1.73
Usp13-202ENSMUST00000108228 Lamc3Q9R0B6 1581 aa25.84■■□□□ 1.73
Usp13-202ENSMUST00000108228 Arhgef5E9Q7D5 1581 aa25.81■■□□□ 1.72
Usp13-202ENSMUST00000108228 Wdr62Q3U3T8 1523 aa25.8■■□□□ 1.72
Usp13-202ENSMUST00000108228 Kdm5bQ80Y84 1544 aa25.78■■□□□ 1.72
Usp13-202ENSMUST00000108228 Shroom4Q1W617 1475 aa25.77■■□□□ 1.72
Usp13-202ENSMUST00000108228 Ccdc18Q640L5 1455 aa25.77■■□□□ 1.72
Usp13-202ENSMUST00000108228 Map3k1P53349 1493 aa25.76■■□□□ 1.71
Usp13-202ENSMUST00000108228 Setd5Q5XJV7 1441 aa25.76■■□□□ 1.71
Usp13-202ENSMUST00000108228 Kif15Q6P9L6 1387 aa25.7■■□□□ 1.7
Usp13-202ENSMUST00000108228 Ap3b1Q9Z1T1 1105 aa25.7■■□□□ 1.7
Usp13-202ENSMUST00000108228 Il27Q8K3I6 234 aa25.69■■□□□ 1.7
Usp13-202ENSMUST00000108228 Camsap1A2AHC3 1581 aa25.68■■□□□ 1.7
Usp13-202ENSMUST00000108228 Aplp2Q06335 707 aa25.64■■□□□ 1.7
Usp13-202ENSMUST00000108228 Tiam1Q60610 1591 aa25.63■■□□□ 1.69
Usp13-202ENSMUST00000108228 Eid3Q3V124 375 aa25.6■■□□□ 1.69
Usp13-202ENSMUST00000108228 TchhA0A0B4J1F9 1599 aa25.59■■□□□ 1.69
Usp13-202ENSMUST00000108228 Grin2bQ01097 1482 aa25.56■■□□□ 1.68
Usp13-202ENSMUST00000108228 Mroh2bQ7M6Y6 1581 aa25.56■■□□□ 1.68
Usp13-202ENSMUST00000108228 Naip1Q9QWK5 1403 aa25.55■■□□□ 1.68
Usp13-202ENSMUST00000108228 Baz1bQ9Z277 1479 aa25.53■■□□□ 1.68
Usp13-202ENSMUST00000108228 Unc13aQ4KUS2 1712 aa25.53■■□□□ 1.68
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms