RNA–Protein interactions for RNA: ENSMUST00000107475.8

Rara-204, Transcript of Retinoic acid receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rara, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-204ENSMUST00000107475 NischQ80TM9 1593 aa33.75■■■□□ 2.99
Rara-204ENSMUST00000107475 Gm35339A0A140LHH9 1649 aa33.11■■■□□ 2.89
Rara-204ENSMUST00000107475 Abcc9P70170 1546 aa32.69■■■□□ 2.82
Rara-204ENSMUST00000107475 Abcc8B2RUS7 1588 aa32.07■■■□□ 2.72
Rara-204ENSMUST00000107475 Rhox8Q6VSS7 320 aa31.31■■■□□ 2.6
Rara-204ENSMUST00000107475 Rtl1Q7M732 1744 aa30.2■■■□□ 2.42
Rara-204ENSMUST00000107475 ScribQ80U72 1612 aa30.08■■■□□ 2.41
Rara-204ENSMUST00000107475 Dcaf1Q80TR8 1506 aa29.67■■■□□ 2.34
Rara-204ENSMUST00000107475 Ccdc180J3QNE4 1664 aa29.66■■■□□ 2.34
Rara-204ENSMUST00000107475 Rb1cc1Q9ESK9 1588 aa29.58■■■□□ 2.33
Rara-204ENSMUST00000107475 Kdm5dQ62240 1548 aa29.48■■■□□ 2.31
Rara-204ENSMUST00000107475 Zcchc6Q5BLK4 1491 aaKnown RBP29.32■■■□□ 2.28
Rara-204ENSMUST00000107475 NacadQ5SWP3 1504 aa29.18■■■□□ 2.26
Rara-204ENSMUST00000107475 Baz1aO88379 1555 aa29.15■■■□□ 2.26
Rara-204ENSMUST00000107475 Ccdc136Q3TVA9 1136 aa29.11■■■□□ 2.25
Rara-204ENSMUST00000107475 Sycp2Q9CUU3 1500 aa28.57■■■□□ 2.16
Rara-204ENSMUST00000107475 Crybg2B7ZCC2 1516 aa28.48■■■□□ 2.15
Rara-204ENSMUST00000107475 Smarca2Q6DIC0 1577 aa28.47■■■□□ 2.15
Rara-204ENSMUST00000107475 HrcG5E8J6 738 aa28.3■■■□□ 2.12
Rara-204ENSMUST00000107475 Trim41Q5NCC3 630 aa28.26■■■□□ 2.11
Rara-204ENSMUST00000107475 BicraF8VPZ9 1578 aa28.03■■■□□ 2.08
Rara-204ENSMUST00000107475 Cecr2E9Q2Z1 1453 aa27.99■■■□□ 2.07
Rara-204ENSMUST00000107475 Ehmt2Q9Z148 1263 aaKnown RBP27.93■■■□□ 2.06
Rara-204ENSMUST00000107475 Cngb1E1AZ71 1325 aa27.83■■■□□ 2.05
Rara-204ENSMUST00000107475 Brd4Q9ESU6 1400 aaKnown RBP27.79■■■□□ 2.04
Rara-204ENSMUST00000107475 Synj1Q8CHC4 1574 aa27.67■■■□□ 2.02
Rara-204ENSMUST00000107475 Cep164Q5DU05 1446 aa27.62■■■□□ 2.01
Rara-204ENSMUST00000107475 Chic1Q8CBW7 227 aa27.56■■■□□ 2
Rara-204ENSMUST00000107475 Esf1Q3V1V3 845 aaKnown RBP27.52■■■□□ 2
Rara-204ENSMUST00000107475 Rsf1E9PWW9 1441 aaKnown RBP27.5■■□□□ 1.99
Rara-204ENSMUST00000107475 CftrP26361 1476 aa27.47■■□□□ 1.99
Rara-204ENSMUST00000107475 Golga3P55937 1487 aa27.45■■□□□ 1.98
Rara-204ENSMUST00000107475 Gab3Q8BSM5 595 aa27.43■■□□□ 1.98
Rara-204ENSMUST00000107475 Ccdc88bQ4QRL3 1481 aa27.39■■□□□ 1.97
Rara-204ENSMUST00000107475 Rpgrip1Q9EPQ2 1331 aa27.37■■□□□ 1.97
Rara-204ENSMUST00000107475 Acin1Q9JIX8 1338 aaKnown RBP27.35■■□□□ 1.97
Rara-204ENSMUST00000107475 Smarca4Q3TKT4 1613 aaKnown RBP27.32■■□□□ 1.96
Rara-204ENSMUST00000107475 Cttnbp2B9EJA2 1648 aa27.3■■□□□ 1.96
Rara-204ENSMUST00000107475 Top2bQ64511 1612 aa27.13■■□□□ 1.93
Rara-204ENSMUST00000107475 Cc2d2aQ8CFW7 1633 aa27.04■■□□□ 1.92
Rara-204ENSMUST00000107475 Iqgap2Q3UQ44 1575 aa27.01■■□□□ 1.91
Rara-204ENSMUST00000107475 Atad2bE9Q166 1460 aaKnown RBP26.85■■□□□ 1.89
Rara-204ENSMUST00000107475 Pds5bQ4VA53 1446 aaKnown RBP26.76■■□□□ 1.87
Rara-204ENSMUST00000107475 Fmn1Q05860 1466 aa26.74■■□□□ 1.87
Rara-204ENSMUST00000107475 Top2aQ01320 1528 aaKnown RBP26.6■■□□□ 1.85
Rara-204ENSMUST00000107475 Frmpd1A2AKB4 1549 aa26.51■■□□□ 1.83
Rara-204ENSMUST00000107475 Rapgef2Q8CHG7 1496 aa26.5■■□□□ 1.83
Rara-204ENSMUST00000107475 Myt1lP97500 1187 aa26.5■■□□□ 1.83
Rara-204ENSMUST00000107475 Wdr62Q3U3T8 1523 aa26.46■■□□□ 1.83
Rara-204ENSMUST00000107475 Npm2Q80W85 207 aa26.44■■□□□ 1.82
Rara-204ENSMUST00000107475 Ercc6F8VPZ5 1481 aa26.35■■□□□ 1.81
Rara-204ENSMUST00000107475 Il27Q8K3I6 234 aa26.35■■□□□ 1.81
Rara-204ENSMUST00000107475 Cep162Q6ZQ06 1403 aa26.35■■□□□ 1.81
Rara-204ENSMUST00000107475 TnnQ80Z71 1560 aa26.32■■□□□ 1.8
Rara-204ENSMUST00000107475 Mier1Q5UAK0 511 aa26.28■■□□□ 1.8
Rara-204ENSMUST00000107475 Unc13aQ4KUS2 1712 aa26.26■■□□□ 1.79
Rara-204ENSMUST00000107475 Kif15Q6P9L6 1387 aa26.26■■□□□ 1.79
Rara-204ENSMUST00000107475 UbtfP25976 765 aaKnown RBP26.21■■□□□ 1.79
Rara-204ENSMUST00000107475 Lamc3Q9R0B6 1581 aa26.17■■□□□ 1.78
Rara-204ENSMUST00000107475 PtprkP35822 1457 aa26.1■■□□□ 1.77
Rara-204ENSMUST00000107475 Pcgf6Q99NA9 353 aa26.09■■□□□ 1.77
Rara-204ENSMUST00000107475 Eif4g1Q6NZJ6 1600 aaKnown RBP26.05■■□□□ 1.76
Rara-204ENSMUST00000107475 Camsap1A2AHC3 1581 aa26.01■■□□□ 1.75
Rara-204ENSMUST00000107475 Zeb1Q64318 1117 aa25.98■■□□□ 1.75
Rara-204ENSMUST00000107475 Clip1Q922J3 1391 aa25.98■■□□□ 1.75
Rara-204ENSMUST00000107475 Arhgap35Q91YM2 1499 aa25.97■■□□□ 1.75
Rara-204ENSMUST00000107475 Plekhg3Q4VAC9 1341 aa25.97■■□□□ 1.75
Rara-204ENSMUST00000107475 Thoc2B1AZI6 1594 aaKnown RBP25.93■■□□□ 1.74
Rara-204ENSMUST00000107475 NefmP08553 848 aa25.93■■□□□ 1.74
Rara-204ENSMUST00000107475 Phldb1Q6PDH0 1371 aaKnown RBP25.91■■□□□ 1.74
Rara-204ENSMUST00000107475 Supt5hO55201 1082 aaKnown RBP25.91■■□□□ 1.74
Rara-204ENSMUST00000107475 Ubl4bQ9CQ84 188 aa25.91■■□□□ 1.74
Rara-204ENSMUST00000107475 Ccdc18Q640L5 1455 aa25.9■■□□□ 1.74
Rara-204ENSMUST00000107475 NrkQ9R0G8 1455 aa25.89■■□□□ 1.74
Rara-204ENSMUST00000107475 Shroom4Q1W617 1475 aa25.87■■□□□ 1.73
Rara-204ENSMUST00000107475 Ap3b1Q9Z1T1 1105 aa25.86■■□□□ 1.73
Rara-204ENSMUST00000107475 Cux2P70298 1426 aa25.83■■□□□ 1.73
Rara-204ENSMUST00000107475 Grin2bQ01097 1482 aa25.81■■□□□ 1.72
Rara-204ENSMUST00000107475 Npm1Q61937 292 aaKnown RBP25.76■■□□□ 1.71
Rara-204ENSMUST00000107475 Eea1Q8BL66 1411 aa25.7■■□□□ 1.7
Rara-204ENSMUST00000107475 Arap1Q4LDD4 1452 aa25.68■■□□□ 1.7
Rara-204ENSMUST00000107475 Baz1bQ9Z277 1479 aa25.68■■□□□ 1.7
Rara-204ENSMUST00000107475 Setd5Q5XJV7 1441 aa25.67■■□□□ 1.7
Rara-204ENSMUST00000107475 Map3k1P53349 1493 aa25.62■■□□□ 1.69
Rara-204ENSMUST00000107475 Fam135aQ6NS59 1506 aa25.62■■□□□ 1.69
Rara-204ENSMUST00000107475 Mroh2bQ7M6Y6 1581 aa25.62■■□□□ 1.69
Rara-204ENSMUST00000107475 LrpprcQ6PB66 1392 aaKnown RBP25.56■■□□□ 1.68
Rara-204ENSMUST00000107475 Arhgef5E9Q7D5 1581 aa25.53■■□□□ 1.68
Rara-204ENSMUST00000107475 Duox2A2AQ99 1517 aa25.49■■□□□ 1.67
Rara-204ENSMUST00000107475 PogzQ8BZH4 1409 aaKnown RBP25.48■■□□□ 1.67
Rara-204ENSMUST00000107475 Efcab5A0JP43 1406 aa25.46■■□□□ 1.67
Rara-204ENSMUST00000107475 Ncapd3Q6ZQK0 1506 aa25.45■■□□□ 1.66
Rara-204ENSMUST00000107475 Ankrd26Q811D2 1581 aa25.45■■□□□ 1.66
Rara-204ENSMUST00000107475 Las1lA2BE28 776 aaKnown RBP25.4■■□□□ 1.66
Rara-204ENSMUST00000107475 Sall2Q9QX96 1004 aa25.4■■□□□ 1.66
Rara-204ENSMUST00000107475 Dnajc5bQ9CQ94 199 aa25.39■■□□□ 1.65
Rara-204ENSMUST00000107475 AqrQ8CFQ3 1481 aaKnown RBP25.39■■□□□ 1.65
Rara-204ENSMUST00000107475 Dhx29Q6PGC1 1365 aaKnown RBP25.38■■□□□ 1.65
Rara-204ENSMUST00000107475 BlmO88700 1416 aa25.36■■□□□ 1.65
Rara-204ENSMUST00000107475 Tiam1Q60610 1591 aa25.36■■□□□ 1.65
Retrieved 100 of 22,080 RNA–protein pairs in 1143.7 ms