RNA–Protein interactions for RNA: ENSMUST00000107344.7

Chtop-206, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 2,972 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-206ENSMUST00000107344 NischQ80TM9 1593 aa25.17■■□□□ 1.62
Chtop-206ENSMUST00000107344 Rhox8Q6VSS7 320 aa24.54■■□□□ 1.52
Chtop-206ENSMUST00000107344 Gm35339A0A140LHH9 1649 aa24.44■■□□□ 1.5
Chtop-206ENSMUST00000107344 Abcc9P70170 1546 aa24.29■■□□□ 1.48
Chtop-206ENSMUST00000107344 Rpgrip1Q9EPQ2 1331 aa24.04■■□□□ 1.44
Chtop-206ENSMUST00000107344 Abcc8B2RUS7 1588 aa23.7■■□□□ 1.38
Chtop-206ENSMUST00000107344 Rtl1Q7M732 1744 aa23.47■■□□□ 1.35
Chtop-206ENSMUST00000107344 Pcgf6Q99NA9 353 aa23.46■■□□□ 1.35
Chtop-206ENSMUST00000107344 Ccdc180J3QNE4 1664 aa23.33■■□□□ 1.33
Chtop-206ENSMUST00000107344 Ehmt2Q9Z148 1263 aaKnown RBP23.22■■□□□ 1.31
Chtop-206ENSMUST00000107344 Acin1Q9JIX8 1338 aaKnown RBP23.04■■□□□ 1.28
Chtop-206ENSMUST00000107344 Zcchc6Q5BLK4 1491 aaKnown RBP22.76■■□□□ 1.23
Chtop-206ENSMUST00000107344 Ccdc136Q3TVA9 1136 aa22.73■■□□□ 1.23
Chtop-206ENSMUST00000107344 Neurod1Q60867 357 aa22.65■■□□□ 1.22
Chtop-206ENSMUST00000107344 DiexfQ8BTT6 772 aaKnown RBP22.65■■□□□ 1.22
Chtop-206ENSMUST00000107344 Las1lA2BE28 776 aaKnown RBP22.56■■□□□ 1.2
Chtop-206ENSMUST00000107344 CenpbP27790 599 aa22.5■■□□□ 1.19
Chtop-206ENSMUST00000107344 Myt1Q8CFC2 1127 aa22.44■■□□□ 1.18
Chtop-206ENSMUST00000107344 Supt5hO55201 1082 aaKnown RBP22.38■■□□□ 1.17
Chtop-206ENSMUST00000107344 1700123L14RikQ3V2K7 440 aa22.38■■□□□ 1.17
Chtop-206ENSMUST00000107344 HrcG5E8J6 738 aa22.29■■□□□ 1.16
Chtop-206ENSMUST00000107344 ScribQ80U72 1612 aa22.27■■□□□ 1.16
Chtop-206ENSMUST00000107344 Trim41Q5NCC3 630 aa22.2■■□□□ 1.14
Chtop-206ENSMUST00000107344 Bcl11aQ9QYE3 773 aa22.17■■□□□ 1.14
Chtop-206ENSMUST00000107344 Rb1cc1Q9ESK9 1588 aa22.12■■□□□ 1.13
Chtop-206ENSMUST00000107344 Dcaf1Q80TR8 1506 aa22.12■■□□□ 1.13
Chtop-206ENSMUST00000107344 Csrnp3P59055 597 aa21.98■■□□□ 1.11
Chtop-206ENSMUST00000107344 Kdm5dQ62240 1548 aa21.8■■□□□ 1.08
Chtop-206ENSMUST00000107344 Gab3Q8BSM5 595 aa21.78■■□□□ 1.08
Chtop-206ENSMUST00000107344 PrkcshO08795 521 aa21.77■■□□□ 1.08
Chtop-206ENSMUST00000107344 Baz1aO88379 1555 aa21.73■■□□□ 1.07
Chtop-206ENSMUST00000107344 Zeb1Q64318 1117 aa21.68■■□□□ 1.06
Chtop-206ENSMUST00000107344 Anks4bQ8K3X6 423 aa21.68■■□□□ 1.06
Chtop-206ENSMUST00000107344 NacadQ5SWP3 1504 aa21.68■■□□□ 1.06
Chtop-206ENSMUST00000107344 Cngb1E1AZ71 1325 aa21.67■■□□□ 1.06
Chtop-206ENSMUST00000107344 Aplp2Q06335 707 aa21.57■■□□□ 1.04
Chtop-206ENSMUST00000107344 Cep164Q5DU05 1446 aa21.54■■□□□ 1.04
Chtop-206ENSMUST00000107344 Amer1Q7TS75 1132 aa21.52■■□□□ 1.04
Chtop-206ENSMUST00000107344 Chic1Q8CBW7 227 aa21.51■■□□□ 1.03
Chtop-206ENSMUST00000107344 Gm38655A0A286YDK6 273 aa21.4■■□□□ 1.02
Chtop-206ENSMUST00000107344 Ifnlr1Q8CGK5 535 aa21.31■■□□□ 1
Chtop-206ENSMUST00000107344 Rsf1E9PWW9 1441 aaKnown RBP21.31■■□□□ 1
Chtop-206ENSMUST00000107344 Mier1Q5UAK0 511 aa21.3■■□□□ 1
Chtop-206ENSMUST00000107344 Smarca2Q6DIC0 1577 aa21.25■□□□□ 0.99
Chtop-206ENSMUST00000107344 Sall2Q9QX96 1004 aa21.24■□□□□ 0.99
Chtop-206ENSMUST00000107344 Sycp2Q9CUU3 1500 aa21.22■□□□□ 0.99
Chtop-206ENSMUST00000107344 Ccdc88bQ4QRL3 1481 aa21.13■□□□□ 0.97
Chtop-206ENSMUST00000107344 NefmP08553 848 aa21.1■□□□□ 0.97
Chtop-206ENSMUST00000107344 Esf1Q3V1V3 845 aaKnown RBP21.09■□□□□ 0.97
Chtop-206ENSMUST00000107344 Crybg2B7ZCC2 1516 aa21.09■□□□□ 0.97
Chtop-206ENSMUST00000107344 Ppargc1bQ8VHJ7 1014 aa21.06■□□□□ 0.96
Chtop-206ENSMUST00000107344 UbtfP25976 765 aaKnown RBP21.06■□□□□ 0.96
Chtop-206ENSMUST00000107344 Fam71e1A1L3C1 212 aa21.05■□□□□ 0.96
Chtop-206ENSMUST00000107344 Wdr66E9Q743 1299 aa21.04■□□□□ 0.96
Chtop-206ENSMUST00000107344 Cecr2E9Q2Z1 1453 aa20.95■□□□□ 0.94
Chtop-206ENSMUST00000107344 Brd4Q9ESU6 1400 aaKnown RBP20.9■□□□□ 0.94
Chtop-206ENSMUST00000107344 Cdk11bP24788 784 aaKnown RBP20.9■□□□□ 0.94
Chtop-206ENSMUST00000107344 Golga3P55937 1487 aa20.87■□□□□ 0.93
Chtop-206ENSMUST00000107344 Myt1lP97500 1187 aa20.85■□□□□ 0.93
Chtop-206ENSMUST00000107344 Aebp2Q9Z248 504 aaKnown RBP20.84■□□□□ 0.93
Chtop-206ENSMUST00000107344 BicraF8VPZ9 1578 aa20.8■□□□□ 0.92
Chtop-206ENSMUST00000107344 Nop58Q6DFW4 536 aaKnown RBP20.77■□□□□ 0.92
Chtop-206ENSMUST00000107344 Synj1Q8CHC4 1574 aa20.77■□□□□ 0.92
Chtop-206ENSMUST00000107344 Mapk8ip2Q9ERE9 830 aa20.73■□□□□ 0.91
Chtop-206ENSMUST00000107344 Hdac5Q9Z2V6 1113 aa20.61■□□□□ 0.89
Chtop-206ENSMUST00000107344 SafbD3YXK2 937 aaKnown RBP20.55■□□□□ 0.88
Chtop-206ENSMUST00000107344 Npm2Q80W85 207 aa20.55■□□□□ 0.88
Chtop-206ENSMUST00000107344 Plekhg3Q4VAC9 1341 aa20.54■□□□□ 0.88
Chtop-206ENSMUST00000107344 CftrP26361 1476 aa20.52■□□□□ 0.88
Chtop-206ENSMUST00000107344 Pknox2Q8BG99 474 aa20.49■□□□□ 0.87
Chtop-206ENSMUST00000107344 ClspnQ80YR7 1315 aa20.48■□□□□ 0.87
Chtop-206ENSMUST00000107344 Cc2d2aQ8CFW7 1633 aa20.48■□□□□ 0.87
Chtop-206ENSMUST00000107344 Fgd1P52734 960 aa20.46■□□□□ 0.87
Chtop-206ENSMUST00000107344 TonslQ6NZL6 1363 aa20.43■□□□□ 0.86
Chtop-206ENSMUST00000107344 Top2bQ64511 1612 aa20.39■□□□□ 0.85
Chtop-206ENSMUST00000107344 Hnrnpul2Q00PI9 745 aaKnown RBP20.33■□□□□ 0.84
Chtop-206ENSMUST00000107344 Rapgef2Q8CHG7 1496 aa20.33■□□□□ 0.84
Chtop-206ENSMUST00000107344 Ap3b1Q9Z1T1 1105 aa20.32■□□□□ 0.84
Chtop-206ENSMUST00000107344 Eid3Q3V124 375 aa20.31■□□□□ 0.84
Chtop-206ENSMUST00000107344 Cep162Q6ZQ06 1403 aa20.29■□□□□ 0.84
Chtop-206ENSMUST00000107344 NrdcQ8BHG1 1161 aa20.28■□□□□ 0.84
Chtop-206ENSMUST00000107344 Clip1Q922J3 1391 aa20.26■□□□□ 0.83
Chtop-206ENSMUST00000107344 Cttnbp2B9EJA2 1648 aa20.26■□□□□ 0.83
Chtop-206ENSMUST00000107344 Ttbk1Q6PCN3 1308 aa20.23■□□□□ 0.83
Chtop-206ENSMUST00000107344 Rtl5Q5DTT4 599 aa20.22■□□□□ 0.83
Chtop-206ENSMUST00000107344 Smarca4Q3TKT4 1613 aaKnown RBP20.2■□□□□ 0.82
Chtop-206ENSMUST00000107344 Anp32aO35381 247 aa20.16■□□□□ 0.82
Chtop-206ENSMUST00000107344 Plcd4Q8K3R3 807 aa20.16■□□□□ 0.82
Chtop-206ENSMUST00000107344 Fmn1Q05860 1466 aa20.15■□□□□ 0.82
Chtop-206ENSMUST00000107344 Il27Q8K3I6 234 aa20.14■□□□□ 0.82
Chtop-206ENSMUST00000107344 Top2aQ01320 1528 aaKnown RBP20.13■□□□□ 0.81
Chtop-206ENSMUST00000107344 Gtf3c3Q3TMP1 882 aa20.11■□□□□ 0.81
Chtop-206ENSMUST00000107344 Tnnt3Q9QZ47 272 aa20.07■□□□□ 0.8
Chtop-206ENSMUST00000107344 Pelp1Q9DBD5 1123 aaKnown RBP20.04■□□□□ 0.8
Chtop-206ENSMUST00000107344 Atad2bE9Q166 1460 aaKnown RBP20.01■□□□□ 0.79
Chtop-206ENSMUST00000107344 Iqgap2Q3UQ44 1575 aa19.99■□□□□ 0.79
Chtop-206ENSMUST00000107344 Pds5bQ4VA53 1446 aaKnown RBP19.99■□□□□ 0.79
Chtop-206ENSMUST00000107344 Ncapd3Q6ZQK0 1506 aa19.97■□□□□ 0.79
Chtop-206ENSMUST00000107344 Nolc1E9Q5C9 702 aaKnown RBP19.95■□□□□ 0.78
Chtop-206ENSMUST00000107344 Upf2A2AT37 1269 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 117.8 ms