RNA–Protein interactions for RNA: ENSMUST00000106843.7

Smarcd2-203, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

TSL 1 (best) BASIC

Gene Smarcd2, Length 2,548 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2-203ENSMUST00000106843 Gm35339A0A140LHH9 1649 aa28.67■■■□□ 2.18
Smarcd2-203ENSMUST00000106843 NischQ80TM9 1593 aa28.48■■■□□ 2.15
Smarcd2-203ENSMUST00000106843 Abcc9P70170 1546 aa27.53■■■□□ 2
Smarcd2-203ENSMUST00000106843 Abcc8B2RUS7 1588 aa27.51■■■□□ 2
Smarcd2-203ENSMUST00000106843 ScribQ80U72 1612 aa26.49■■□□□ 1.83
Smarcd2-203ENSMUST00000106843 Kdm5dQ62240 1548 aa25.63■■□□□ 1.69
Smarcd2-203ENSMUST00000106843 NacadQ5SWP3 1504 aa25.6■■□□□ 1.69
Smarcd2-203ENSMUST00000106843 Dcaf1Q80TR8 1506 aa25.21■■□□□ 1.63
Smarcd2-203ENSMUST00000106843 Sycp2Q9CUU3 1500 aa25.13■■□□□ 1.61
Smarcd2-203ENSMUST00000106843 Rhox8Q6VSS7 320 aa24.86■■□□□ 1.57
Smarcd2-203ENSMUST00000106843 BicraF8VPZ9 1578 aa24.82■■□□□ 1.56
Smarcd2-203ENSMUST00000106843 Rb1cc1Q9ESK9 1588 aa24.81■■□□□ 1.56
Smarcd2-203ENSMUST00000106843 Baz1aO88379 1555 aa24.44■■□□□ 1.5
Smarcd2-203ENSMUST00000106843 Crybg2B7ZCC2 1516 aa24.27■■□□□ 1.48
Smarcd2-203ENSMUST00000106843 Ccdc180J3QNE4 1664 aa24.25■■□□□ 1.47
Smarcd2-203ENSMUST00000106843 Dnajc5bQ9CQ94 199 aa24.24■■□□□ 1.47
Smarcd2-203ENSMUST00000106843 Zcchc6Q5BLK4 1491 aaKnown RBP24.18■■□□□ 1.46
Smarcd2-203ENSMUST00000106843 Pds5bQ4VA53 1446 aaKnown RBP24.01■■□□□ 1.43
Smarcd2-203ENSMUST00000106843 Atad2bE9Q166 1460 aaKnown RBP23.83■■□□□ 1.4
Smarcd2-203ENSMUST00000106843 Cecr2E9Q2Z1 1453 aa23.8■■□□□ 1.4
Smarcd2-203ENSMUST00000106843 Thoc2B1AZI6 1594 aaKnown RBP23.77■■□□□ 1.4
Smarcd2-203ENSMUST00000106843 Smarca2Q6DIC0 1577 aa23.75■■□□□ 1.39
Smarcd2-203ENSMUST00000106843 Smarca4Q3TKT4 1613 aaKnown RBP23.65■■□□□ 1.38
Smarcd2-203ENSMUST00000106843 Iqgap2Q3UQ44 1575 aa23.54■■□□□ 1.36
Smarcd2-203ENSMUST00000106843 Ercc6F8VPZ5 1481 aa23.49■■□□□ 1.35
Smarcd2-203ENSMUST00000106843 Cc2d2aQ8CFW7 1633 aa23.46■■□□□ 1.35
Smarcd2-203ENSMUST00000106843 Frmpd1A2AKB4 1549 aa23.35■■□□□ 1.33
Smarcd2-203ENSMUST00000106843 Ccdc136Q3TVA9 1136 aa23.33■■□□□ 1.33
Smarcd2-203ENSMUST00000106843 Wdr62Q3U3T8 1523 aa23.32■■□□□ 1.32
Smarcd2-203ENSMUST00000106843 Rtl1Q7M732 1744 aa23.29■■□□□ 1.32
Smarcd2-203ENSMUST00000106843 Fam135aQ6NS59 1506 aa23.24■■□□□ 1.31
Smarcd2-203ENSMUST00000106843 CftrP26361 1476 aa23.18■■□□□ 1.3
Smarcd2-203ENSMUST00000106843 Phldb1Q6PDH0 1371 aaKnown RBP23.16■■□□□ 1.3
Smarcd2-203ENSMUST00000106843 Synj1Q8CHC4 1574 aa23.15■■□□□ 1.3
Smarcd2-203ENSMUST00000106843 Brd4Q9ESU6 1400 aaKnown RBP23.08■■□□□ 1.28
Smarcd2-203ENSMUST00000106843 Ubl4bQ9CQ84 188 aa23.05■■□□□ 1.28
Smarcd2-203ENSMUST00000106843 Cttnbp2B9EJA2 1648 aa23.03■■□□□ 1.28
Smarcd2-203ENSMUST00000106843 Unc13aQ4KUS2 1712 aa22.97■■□□□ 1.27
Smarcd2-203ENSMUST00000106843 Esf1Q3V1V3 845 aaKnown RBP22.85■■□□□ 1.25
Smarcd2-203ENSMUST00000106843 Trim41Q5NCC3 630 aa22.79■■□□□ 1.24
Smarcd2-203ENSMUST00000106843 Baz1bQ9Z277 1479 aa22.77■■□□□ 1.24
Smarcd2-203ENSMUST00000106843 Mrc2Q64449 1479 aa22.74■■□□□ 1.23
Smarcd2-203ENSMUST00000106843 Kif15Q6P9L6 1387 aa22.57■■□□□ 1.2
Smarcd2-203ENSMUST00000106843 Rsf1E9PWW9 1441 aaKnown RBP22.55■■□□□ 1.2
Smarcd2-203ENSMUST00000106843 Cux2P70298 1426 aa22.53■■□□□ 1.2
Smarcd2-203ENSMUST00000106843 Lamc3Q9R0B6 1581 aa22.41■■□□□ 1.18
Smarcd2-203ENSMUST00000106843 Cngb1E1AZ71 1325 aa22.39■■□□□ 1.17
Smarcd2-203ENSMUST00000106843 Golga3P55937 1487 aa22.35■■□□□ 1.17
Smarcd2-203ENSMUST00000106843 Npm1Q61937 292 aaKnown RBP22.31■■□□□ 1.16
Smarcd2-203ENSMUST00000106843 Kif21aQ9QXL2 1672 aa22.27■■□□□ 1.16
Smarcd2-203ENSMUST00000106843 Top2bQ64511 1612 aa22.27■■□□□ 1.15
Smarcd2-203ENSMUST00000106843 Il27Q8K3I6 234 aa22.25■■□□□ 1.15
Smarcd2-203ENSMUST00000106843 Lrriq1Q0P5X1 1673 aa22.24■■□□□ 1.15
Smarcd2-203ENSMUST00000106843 TnnQ80Z71 1560 aa22.17■■□□□ 1.14
Smarcd2-203ENSMUST00000106843 Cep164Q5DU05 1446 aa22.15■■□□□ 1.14
Smarcd2-203ENSMUST00000106843 Ccdc18Q640L5 1455 aa22.07■■□□□ 1.12
Smarcd2-203ENSMUST00000106843 Dhx29Q6PGC1 1365 aaKnown RBP22.06■■□□□ 1.12
Smarcd2-203ENSMUST00000106843 Camsap1A2AHC3 1581 aa22.04■■□□□ 1.12
Smarcd2-203ENSMUST00000106843 Fmn1Q05860 1466 aa22.03■■□□□ 1.12
Smarcd2-203ENSMUST00000106843 LrpprcQ6PB66 1392 aaKnown RBP22.03■■□□□ 1.12
Smarcd2-203ENSMUST00000106843 Urb2E9Q7L1 1524 aaKnown RBP21.99■■□□□ 1.11
Smarcd2-203ENSMUST00000106843 Plb1Q3TTY0 1478 aa21.99■■□□□ 1.11
Smarcd2-203ENSMUST00000106843 Ccdc88bQ4QRL3 1481 aa21.9■■□□□ 1.1
Smarcd2-203ENSMUST00000106843 PogzQ8BZH4 1409 aaKnown RBP21.89■■□□□ 1.09
Smarcd2-203ENSMUST00000106843 Crocc2F6XLV1 1638 aa21.86■■□□□ 1.09
Smarcd2-203ENSMUST00000106843 Eif4g3Q80XI3 1579 aaKnown RBP21.86■■□□□ 1.09
Smarcd2-203ENSMUST00000106843 Chic1Q8CBW7 227 aa21.85■■□□□ 1.09
Smarcd2-203ENSMUST00000106843 Duox2A2AQ99 1517 aa21.81■■□□□ 1.08
Smarcd2-203ENSMUST00000106843 Grin2bQ01097 1482 aa21.78■■□□□ 1.08
Smarcd2-203ENSMUST00000106843 Rpgrip1Q9EPQ2 1331 aa21.69■■□□□ 1.06
Smarcd2-203ENSMUST00000106843 Ift140E9PY46 1464 aa21.68■■□□□ 1.06
Smarcd2-203ENSMUST00000106843 Disp1Q3TDN0 1521 aa21.65■■□□□ 1.06
Smarcd2-203ENSMUST00000106843 Dnajc5P60904 198 aa21.65■■□□□ 1.06
Smarcd2-203ENSMUST00000106843 Top2aQ01320 1528 aaKnown RBP21.64■■□□□ 1.06
Smarcd2-203ENSMUST00000106843 Samd9lQ69Z37 1561 aa21.63■■□□□ 1.05
Smarcd2-203ENSMUST00000106843 Efcab5A0JP43 1406 aa21.62■■□□□ 1.05
Smarcd2-203ENSMUST00000106843 PtprkP35822 1457 aa21.58■■□□□ 1.05
Smarcd2-203ENSMUST00000106843 Rusc2Q80U22 1514 aa21.58■■□□□ 1.05
Smarcd2-203ENSMUST00000106843 Rad54l2Q99NG0 1466 aa21.56■■□□□ 1.04
Smarcd2-203ENSMUST00000106843 Shroom2A2ALU4 1481 aa21.55■■□□□ 1.04
Smarcd2-203ENSMUST00000106843 NrkQ9R0G8 1455 aa21.53■■□□□ 1.04
Smarcd2-203ENSMUST00000106843 Nup160Q9Z0W3 1402 aaKnown RBP21.5■■□□□ 1.03
Smarcd2-203ENSMUST00000106843 Setd1bQ8CFT2 1985 aa21.48■■□□□ 1.03
Smarcd2-203ENSMUST00000106843 Pabpn1Q8CCS6 302 aaKnown RBP21.47■■□□□ 1.03
Smarcd2-203ENSMUST00000106843 Shroom4Q1W617 1475 aa21.45■■□□□ 1.02
Smarcd2-203ENSMUST00000106843 Magi3Q9EQJ9 1476 aa21.43■■□□□ 1.02
Smarcd2-203ENSMUST00000106843 Pelp1Q9DBD5 1123 aaKnown RBP21.43■■□□□ 1.02
Smarcd2-203ENSMUST00000106843 Cc2d2bA0A286YDU8 1405 aa21.42■■□□□ 1.02
Smarcd2-203ENSMUST00000106843 Grin2aP35436 1464 aa21.41■■□□□ 1.02
Smarcd2-203ENSMUST00000106843 Zeb1Q64318 1117 aa21.34■■□□□ 1.01
Smarcd2-203ENSMUST00000106843 Pbrm1Q8BSQ9 1634 aaKnown RBP21.34■■□□□ 1.01
Smarcd2-203ENSMUST00000106843 Gab3Q8BSM5 595 aa21.32■■□□□ 1
Smarcd2-203ENSMUST00000106843 Pla2r1Q62028 1487 aa21.32■■□□□ 1
Smarcd2-203ENSMUST00000106843 Col17a1Q07563 1470 aa21.31■■□□□ 1
Smarcd2-203ENSMUST00000106843 Npm2Q80W85 207 aa21.29■■□□□ 1
Smarcd2-203ENSMUST00000106843 HrcG5E8J6 738 aa21.29■■□□□ 1
Smarcd2-203ENSMUST00000106843 SynmQ70IV5 1561 aa21.29■■□□□ 1
Smarcd2-203ENSMUST00000106843 AqrQ8CFQ3 1481 aaKnown RBP21.28■■□□□ 1
Smarcd2-203ENSMUST00000106843 Fgd6Q69ZL1 1399 aa21.21■□□□□ 0.99
Smarcd2-203ENSMUST00000106843 Mroh2bQ7M6Y6 1581 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 150 ms