RNA–Protein interactions for RNA: ENSMUST00000106789.7

Trim3-202, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 2,841 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-202ENSMUST00000106789 NischQ80TM9 1593 aa40.61■■■■■ 4.09
Trim3-202ENSMUST00000106789 Abcc9P70170 1546 aa39.39■■■■□ 3.9
Trim3-202ENSMUST00000106789 Gm35339A0A140LHH9 1649 aa39.37■■■■□ 3.89
Trim3-202ENSMUST00000106789 Rhox8Q6VSS7 320 aa38.59■■■■□ 3.77
Trim3-202ENSMUST00000106789 Abcc8B2RUS7 1588 aa38.35■■■■□ 3.73
Trim3-202ENSMUST00000106789 Rtl1Q7M732 1744 aa38.01■■■■□ 3.68
Trim3-202ENSMUST00000106789 Ccdc180J3QNE4 1664 aa37.56■■■■□ 3.6
Trim3-202ENSMUST00000106789 Rpgrip1Q9EPQ2 1331 aa36.7■■■■□ 3.47
Trim3-202ENSMUST00000106789 Zcchc6Q5BLK4 1491 aaKnown RBP36.65■■■■□ 3.46
Trim3-202ENSMUST00000106789 Acin1Q9JIX8 1338 aaKnown RBP36.03■■■■□ 3.36
Trim3-202ENSMUST00000106789 Ehmt2Q9Z148 1263 aaKnown RBP35.9■■■■□ 3.34
Trim3-202ENSMUST00000106789 HrcG5E8J6 738 aa35.81■■■■□ 3.32
Trim3-202ENSMUST00000106789 Ccdc136Q3TVA9 1136 aa35.74■■■■□ 3.31
Trim3-202ENSMUST00000106789 Dcaf1Q80TR8 1506 aa35.72■■■■□ 3.31
Trim3-202ENSMUST00000106789 Rb1cc1Q9ESK9 1588 aa35.64■■■■□ 3.3
Trim3-202ENSMUST00000106789 ScribQ80U72 1612 aa35.47■■■■□ 3.27
Trim3-202ENSMUST00000106789 Baz1aO88379 1555 aa35.18■■■■□ 3.22
Trim3-202ENSMUST00000106789 Trim41Q5NCC3 630 aa35.13■■■■□ 3.21
Trim3-202ENSMUST00000106789 Kdm5dQ62240 1548 aa34.99■■■■□ 3.19
Trim3-202ENSMUST00000106789 Pcgf6Q99NA9 353 aa34.94■■■■□ 3.18
Trim3-202ENSMUST00000106789 Cep164Q5DU05 1446 aa34.58■■■■□ 3.13
Trim3-202ENSMUST00000106789 NacadQ5SWP3 1504 aa34.56■■■■□ 3.12
Trim3-202ENSMUST00000106789 Smarca2Q6DIC0 1577 aa34.43■■■■□ 3.1
Trim3-202ENSMUST00000106789 Supt5hO55201 1082 aaKnown RBP34.28■■■■□ 3.08
Trim3-202ENSMUST00000106789 Crybg2B7ZCC2 1516 aa34.25■■■■□ 3.07
Trim3-202ENSMUST00000106789 Cngb1E1AZ71 1325 aa34.12■■■■□ 3.05
Trim3-202ENSMUST00000106789 Gab3Q8BSM5 595 aa34.07■■■■□ 3.04
Trim3-202ENSMUST00000106789 Chic1Q8CBW7 227 aa34.07■■■■□ 3.04
Trim3-202ENSMUST00000106789 Rsf1E9PWW9 1441 aaKnown RBP34.02■■■■□ 3.04
Trim3-202ENSMUST00000106789 Sycp2Q9CUU3 1500 aa33.8■■■■□ 3
Trim3-202ENSMUST00000106789 Zeb1Q64318 1117 aa33.77■■■■□ 3
Trim3-202ENSMUST00000106789 Brd4Q9ESU6 1400 aaKnown RBP33.73■■■□□ 2.99
Trim3-202ENSMUST00000106789 Ccdc88bQ4QRL3 1481 aa33.71■■■□□ 2.99
Trim3-202ENSMUST00000106789 Mier1Q5UAK0 511 aa33.61■■■□□ 2.97
Trim3-202ENSMUST00000106789 NefmP08553 848 aa33.6■■■□□ 2.97
Trim3-202ENSMUST00000106789 Cecr2E9Q2Z1 1453 aa33.6■■■□□ 2.97
Trim3-202ENSMUST00000106789 Golga3P55937 1487 aa33.58■■■□□ 2.97
Trim3-202ENSMUST00000106789 Neurod1Q60867 357 aa33.58■■■□□ 2.97
Trim3-202ENSMUST00000106789 Synj1Q8CHC4 1574 aa33.4■■■□□ 2.94
Trim3-202ENSMUST00000106789 Esf1Q3V1V3 845 aaKnown RBP33.32■■■□□ 2.92
Trim3-202ENSMUST00000106789 Sall2Q9QX96 1004 aa33.26■■■□□ 2.92
Trim3-202ENSMUST00000106789 CftrP26361 1476 aa33.11■■■□□ 2.89
Trim3-202ENSMUST00000106789 UbtfP25976 765 aaKnown RBP33.02■■■□□ 2.88
Trim3-202ENSMUST00000106789 Top2bQ64511 1612 aa33■■■□□ 2.87
Trim3-202ENSMUST00000106789 BicraF8VPZ9 1578 aa33■■■□□ 2.87
Trim3-202ENSMUST00000106789 Las1lA2BE28 776 aaKnown RBP32.85■■■□□ 2.85
Trim3-202ENSMUST00000106789 Wdr66E9Q743 1299 aa32.82■■■□□ 2.84
Trim3-202ENSMUST00000106789 Cttnbp2B9EJA2 1648 aa32.8■■■□□ 2.84
Trim3-202ENSMUST00000106789 Cc2d2aQ8CFW7 1633 aa32.79■■■□□ 2.84
Trim3-202ENSMUST00000106789 Rapgef2Q8CHG7 1496 aa32.75■■■□□ 2.83
Trim3-202ENSMUST00000106789 Aebp2Q9Z248 504 aaKnown RBP32.74■■■□□ 2.83
Trim3-202ENSMUST00000106789 Myt1lP97500 1187 aa32.68■■■□□ 2.82
Trim3-202ENSMUST00000106789 Anks4bQ8K3X6 423 aa32.68■■■□□ 2.82
Trim3-202ENSMUST00000106789 Fmn1Q05860 1466 aa32.54■■■□□ 2.8
Trim3-202ENSMUST00000106789 Cep162Q6ZQ06 1403 aa32.53■■■□□ 2.8
Trim3-202ENSMUST00000106789 Top2aQ01320 1528 aaKnown RBP32.5■■■□□ 2.79
Trim3-202ENSMUST00000106789 Csrnp3P59055 597 aa32.49■■■□□ 2.79
Trim3-202ENSMUST00000106789 ClspnQ80YR7 1315 aa32.49■■■□□ 2.79
Trim3-202ENSMUST00000106789 Smarca4Q3TKT4 1613 aaKnown RBP32.48■■■□□ 2.79
Trim3-202ENSMUST00000106789 Ppargc1bQ8VHJ7 1014 aa32.48■■■□□ 2.79
Trim3-202ENSMUST00000106789 1700123L14RikQ3V2K7 440 aa32.43■■■□□ 2.78
Trim3-202ENSMUST00000106789 Npm2Q80W85 207 aa32.41■■■□□ 2.78
Trim3-202ENSMUST00000106789 Cdk11bP24788 784 aaKnown RBP32.41■■■□□ 2.78
Trim3-202ENSMUST00000106789 Nop58Q6DFW4 536 aaKnown RBP32.39■■■□□ 2.78
Trim3-202ENSMUST00000106789 TonslQ6NZL6 1363 aa32.33■■■□□ 2.77
Trim3-202ENSMUST00000106789 Plekhg3Q4VAC9 1341 aa32.29■■■□□ 2.76
Trim3-202ENSMUST00000106789 Clip1Q922J3 1391 aa32.25■■■□□ 2.75
Trim3-202ENSMUST00000106789 Ncapd3Q6ZQK0 1506 aa32.02■■■□□ 2.72
Trim3-202ENSMUST00000106789 Iqgap2Q3UQ44 1575 aa32.01■■■□□ 2.72
Trim3-202ENSMUST00000106789 Eif4g1Q6NZJ6 1600 aaKnown RBP32■■■□□ 2.71
Trim3-202ENSMUST00000106789 Aplp2Q06335 707 aa31.92■■■□□ 2.7
Trim3-202ENSMUST00000106789 Ap3b1Q9Z1T1 1105 aa31.8■■■□□ 2.68
Trim3-202ENSMUST00000106789 Arhgap35Q91YM2 1499 aa31.8■■■□□ 2.68
Trim3-202ENSMUST00000106789 Eid3Q3V124 375 aa31.77■■■□□ 2.68
Trim3-202ENSMUST00000106789 Gm38655A0A286YDK6 273 aa31.75■■■□□ 2.67
Trim3-202ENSMUST00000106789 Eea1Q8BL66 1411 aa31.72■■■□□ 2.67
Trim3-202ENSMUST00000106789 Arap1Q4LDD4 1452 aa31.71■■■□□ 2.67
Trim3-202ENSMUST00000106789 CenpbP27790 599 aa31.71■■■□□ 2.67
Trim3-202ENSMUST00000106789 PtprkP35822 1457 aa31.7■■■□□ 2.67
Trim3-202ENSMUST00000106789 TnnQ80Z71 1560 aa31.7■■■□□ 2.66
Trim3-202ENSMUST00000106789 Atad2bE9Q166 1460 aaKnown RBP31.66■■■□□ 2.66
Trim3-202ENSMUST00000106789 Il27Q8K3I6 234 aa31.64■■■□□ 2.66
Trim3-202ENSMUST00000106789 Setd5Q5XJV7 1441 aa31.59■■■□□ 2.65
Trim3-202ENSMUST00000106789 NrkQ9R0G8 1455 aa31.58■■■□□ 2.65
Trim3-202ENSMUST00000106789 Arhgef5E9Q7D5 1581 aa31.54■■■□□ 2.64
Trim3-202ENSMUST00000106789 Kdm5bQ80Y84 1544 aa31.54■■■□□ 2.64
Trim3-202ENSMUST00000106789 Ccdc18Q640L5 1455 aa31.51■■■□□ 2.63
Trim3-202ENSMUST00000106789 Shroom4Q1W617 1475 aa31.39■■■□□ 2.62
Trim3-202ENSMUST00000106789 Pds5bQ4VA53 1446 aaKnown RBP31.38■■■□□ 2.61
Trim3-202ENSMUST00000106789 Kif15Q6P9L6 1387 aa31.36■■■□□ 2.61
Trim3-202ENSMUST00000106789 Baz1bQ9Z277 1479 aa31.35■■■□□ 2.61
Trim3-202ENSMUST00000106789 Hnrnpul2Q00PI9 745 aaKnown RBP31.34■■■□□ 2.61
Trim3-202ENSMUST00000106789 Mapk8ip2Q9ERE9 830 aa31.34■■■□□ 2.61
Trim3-202ENSMUST00000106789 Frmpd1A2AKB4 1549 aa31.33■■■□□ 2.61
Trim3-202ENSMUST00000106789 Tiam1Q60610 1591 aa31.33■■■□□ 2.61
Trim3-202ENSMUST00000106789 Map3k1P53349 1493 aa31.32■■■□□ 2.6
Trim3-202ENSMUST00000106789 BlmO88700 1416 aa31.32■■■□□ 2.6
Trim3-202ENSMUST00000106789 Lamc3Q9R0B6 1581 aa31.32■■■□□ 2.6
Trim3-202ENSMUST00000106789 Myt1Q8CFC2 1127 aa31.28■■■□□ 2.6
Trim3-202ENSMUST00000106789 Fam50aQ9WV03 339 aaKnown RBP31.26■■■□□ 2.6
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms