RNA–Protein interactions for RNA: ENSMUST00000103622.2

Trav13n-2-201, Transcript of T cell receptor alpha variable 13D-2 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav13n-2, Length 264 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2-201ENSMUST00000103622 Gm35339A0A140LHH9 1649 aa31.14■■■□□ 2.58
Trav13n-2-201ENSMUST00000103622 NischQ80TM9 1593 aa30.6■■■□□ 2.49
Trav13n-2-201ENSMUST00000103622 Abcc8B2RUS7 1588 aa29.64■■■□□ 2.34
Trav13n-2-201ENSMUST00000103622 Abcc9P70170 1546 aa29.55■■■□□ 2.32
Trav13n-2-201ENSMUST00000103622 ScribQ80U72 1612 aa28.69■■■□□ 2.18
Trav13n-2-201ENSMUST00000103622 NacadQ5SWP3 1504 aa27.84■■■□□ 2.05
Trav13n-2-201ENSMUST00000103622 Kdm5dQ62240 1548 aa27.69■■■□□ 2.02
Trav13n-2-201ENSMUST00000103622 Sycp2Q9CUU3 1500 aa27.28■■□□□ 1.96
Trav13n-2-201ENSMUST00000103622 Dcaf1Q80TR8 1506 aa27.27■■□□□ 1.96
Trav13n-2-201ENSMUST00000103622 BicraF8VPZ9 1578 aa26.91■■□□□ 1.9
Trav13n-2-201ENSMUST00000103622 Rb1cc1Q9ESK9 1588 aa26.63■■□□□ 1.85
Trav13n-2-201ENSMUST00000103622 Dnajc5bQ9CQ94 199 aa26.48■■□□□ 1.83
Trav13n-2-201ENSMUST00000103622 Ccdc180J3QNE4 1664 aa26.34■■□□□ 1.81
Trav13n-2-201ENSMUST00000103622 Crybg2B7ZCC2 1516 aa26.3■■□□□ 1.8
Trav13n-2-201ENSMUST00000103622 Pds5bQ4VA53 1446 aaKnown RBP26.29■■□□□ 1.8
Trav13n-2-201ENSMUST00000103622 Baz1aO88379 1555 aa26.26■■□□□ 1.79
Trav13n-2-201ENSMUST00000103622 Rhox8Q6VSS7 320 aa26.17■■□□□ 1.78
Trav13n-2-201ENSMUST00000103622 Thoc2B1AZI6 1594 aaKnown RBP26.09■■□□□ 1.77
Trav13n-2-201ENSMUST00000103622 Atad2bE9Q166 1460 aaKnown RBP25.97■■□□□ 1.75
Trav13n-2-201ENSMUST00000103622 Zcchc6Q5BLK4 1491 aaKnown RBP25.87■■□□□ 1.73
Trav13n-2-201ENSMUST00000103622 Ercc6F8VPZ5 1481 aa25.7■■□□□ 1.7
Trav13n-2-201ENSMUST00000103622 Cc2d2aQ8CFW7 1633 aa25.68■■□□□ 1.7
Trav13n-2-201ENSMUST00000103622 Smarca4Q3TKT4 1613 aaKnown RBP25.64■■□□□ 1.7
Trav13n-2-201ENSMUST00000103622 Smarca2Q6DIC0 1577 aa25.64■■□□□ 1.69
Trav13n-2-201ENSMUST00000103622 Iqgap2Q3UQ44 1575 aa25.52■■□□□ 1.68
Trav13n-2-201ENSMUST00000103622 Fam135aQ6NS59 1506 aa25.47■■□□□ 1.67
Trav13n-2-201ENSMUST00000103622 Cecr2E9Q2Z1 1453 aa25.42■■□□□ 1.66
Trav13n-2-201ENSMUST00000103622 Wdr62Q3U3T8 1523 aa25.34■■□□□ 1.65
Trav13n-2-201ENSMUST00000103622 Baz1bQ9Z277 1479 aa25.31■■□□□ 1.64
Trav13n-2-201ENSMUST00000103622 Frmpd1A2AKB4 1549 aa25.3■■□□□ 1.64
Trav13n-2-201ENSMUST00000103622 Phldb1Q6PDH0 1371 aaKnown RBP25.29■■□□□ 1.64
Trav13n-2-201ENSMUST00000103622 Ubl4bQ9CQ84 188 aa25.06■■□□□ 1.6
Trav13n-2-201ENSMUST00000103622 Unc13aQ4KUS2 1712 aa24.97■■□□□ 1.59
Trav13n-2-201ENSMUST00000103622 Rtl1Q7M732 1744 aa24.94■■□□□ 1.58
Trav13n-2-201ENSMUST00000103622 Mrc2Q64449 1479 aa24.88■■□□□ 1.57
Trav13n-2-201ENSMUST00000103622 Cttnbp2B9EJA2 1648 aa24.86■■□□□ 1.57
Trav13n-2-201ENSMUST00000103622 CftrP26361 1476 aa24.85■■□□□ 1.57
Trav13n-2-201ENSMUST00000103622 Brd4Q9ESU6 1400 aaKnown RBP24.78■■□□□ 1.56
Trav13n-2-201ENSMUST00000103622 Synj1Q8CHC4 1574 aa24.74■■□□□ 1.55
Trav13n-2-201ENSMUST00000103622 Ccdc136Q3TVA9 1136 aa24.54■■□□□ 1.52
Trav13n-2-201ENSMUST00000103622 Esf1Q3V1V3 845 aaKnown RBP24.45■■□□□ 1.5
Trav13n-2-201ENSMUST00000103622 Rsf1E9PWW9 1441 aaKnown RBP24.38■■□□□ 1.49
Trav13n-2-201ENSMUST00000103622 Cux2P70298 1426 aa24.36■■□□□ 1.49
Trav13n-2-201ENSMUST00000103622 Lrriq1Q0P5X1 1673 aa24.35■■□□□ 1.49
Trav13n-2-201ENSMUST00000103622 Dnajc5P60904 198 aa24.33■■□□□ 1.49
Trav13n-2-201ENSMUST00000103622 Kif15Q6P9L6 1387 aa24.32■■□□□ 1.48
Trav13n-2-201ENSMUST00000103622 Trim41Q5NCC3 630 aa24.27■■□□□ 1.48
Trav13n-2-201ENSMUST00000103622 Kif21aQ9QXL2 1672 aa24.21■■□□□ 1.47
Trav13n-2-201ENSMUST00000103622 Lamc3Q9R0B6 1581 aa24.21■■□□□ 1.47
Trav13n-2-201ENSMUST00000103622 Npm1Q61937 292 aaKnown RBP24.17■■□□□ 1.46
Trav13n-2-201ENSMUST00000103622 Cep164Q5DU05 1446 aa24.04■■□□□ 1.44
Trav13n-2-201ENSMUST00000103622 Eif4g3Q80XI3 1579 aaKnown RBP24.01■■□□□ 1.43
Trav13n-2-201ENSMUST00000103622 Ccdc18Q640L5 1455 aa23.89■■□□□ 1.42
Trav13n-2-201ENSMUST00000103622 Shroom2A2ALU4 1481 aa23.88■■□□□ 1.41
Trav13n-2-201ENSMUST00000103622 TnnQ80Z71 1560 aa23.84■■□□□ 1.41
Trav13n-2-201ENSMUST00000103622 Dhx29Q6PGC1 1365 aaKnown RBP23.84■■□□□ 1.41
Trav13n-2-201ENSMUST00000103622 Urb2E9Q7L1 1524 aaKnown RBP23.83■■□□□ 1.41
Trav13n-2-201ENSMUST00000103622 Plb1Q3TTY0 1478 aa23.79■■□□□ 1.4
Trav13n-2-201ENSMUST00000103622 LrpprcQ6PB66 1392 aaKnown RBP23.78■■□□□ 1.4
Trav13n-2-201ENSMUST00000103622 Top2bQ64511 1612 aa23.78■■□□□ 1.4
Trav13n-2-201ENSMUST00000103622 Il27Q8K3I6 234 aa23.77■■□□□ 1.4
Trav13n-2-201ENSMUST00000103622 Golga3P55937 1487 aa23.76■■□□□ 1.39
Trav13n-2-201ENSMUST00000103622 Crocc2F6XLV1 1638 aa23.73■■□□□ 1.39
Trav13n-2-201ENSMUST00000103622 Camsap1A2AHC3 1581 aa23.72■■□□□ 1.39
Trav13n-2-201ENSMUST00000103622 Cngb1E1AZ71 1325 aa23.64■■□□□ 1.38
Trav13n-2-201ENSMUST00000103622 Pabpn1Q8CCS6 302 aaKnown RBP23.63■■□□□ 1.37
Trav13n-2-201ENSMUST00000103622 Ift140E9PY46 1464 aa23.62■■□□□ 1.37
Trav13n-2-201ENSMUST00000103622 PogzQ8BZH4 1409 aaKnown RBP23.6■■□□□ 1.37
Trav13n-2-201ENSMUST00000103622 Fmn1Q05860 1466 aa23.57■■□□□ 1.36
Trav13n-2-201ENSMUST00000103622 Col17a1Q07563 1470 aa23.56■■□□□ 1.36
Trav13n-2-201ENSMUST00000103622 Rusc2Q80U22 1514 aa23.54■■□□□ 1.36
Trav13n-2-201ENSMUST00000103622 Duox2A2AQ99 1517 aa23.49■■□□□ 1.35
Trav13n-2-201ENSMUST00000103622 Grin2bQ01097 1482 aa23.38■■□□□ 1.33
Trav13n-2-201ENSMUST00000103622 Pelp1Q9DBD5 1123 aaKnown RBP23.38■■□□□ 1.33
Trav13n-2-201ENSMUST00000103622 Disp1Q3TDN0 1521 aa23.38■■□□□ 1.33
Trav13n-2-201ENSMUST00000103622 Pbrm1Q8BSQ9 1634 aaKnown RBP23.35■■□□□ 1.33
Trav13n-2-201ENSMUST00000103622 Zcchc11B2RX14 1644 aaKnown RBP23.34■■□□□ 1.33
Trav13n-2-201ENSMUST00000103622 Setd1bQ8CFT2 1985 aa23.34■■□□□ 1.33
Trav13n-2-201ENSMUST00000103622 Cc2d2bA0A286YDU8 1405 aa23.32■■□□□ 1.32
Trav13n-2-201ENSMUST00000103622 Efcab5A0JP43 1406 aa23.32■■□□□ 1.32
Trav13n-2-201ENSMUST00000103622 Nup160Q9Z0W3 1402 aaKnown RBP23.29■■□□□ 1.32
Trav13n-2-201ENSMUST00000103622 Samd9lQ69Z37 1561 aa23.25■■□□□ 1.31
Trav13n-2-201ENSMUST00000103622 NrkQ9R0G8 1455 aa23.11■■□□□ 1.29
Trav13n-2-201ENSMUST00000103622 Fgd6Q69ZL1 1399 aa23.1■■□□□ 1.29
Trav13n-2-201ENSMUST00000103622 Grin2aP35436 1464 aa23.1■■□□□ 1.29
Trav13n-2-201ENSMUST00000103622 AqrQ8CFQ3 1481 aaKnown RBP23.1■■□□□ 1.29
Trav13n-2-201ENSMUST00000103622 Rad54l2Q99NG0 1466 aa23.1■■□□□ 1.29
Trav13n-2-201ENSMUST00000103622 Magi3Q9EQJ9 1476 aa23.06■■□□□ 1.28
Trav13n-2-201ENSMUST00000103622 Top2aQ01320 1528 aaKnown RBP23.03■■□□□ 1.28
Trav13n-2-201ENSMUST00000103622 PtprkP35822 1457 aa23.01■■□□□ 1.27
Trav13n-2-201ENSMUST00000103622 Adgrl3Q80TS3 1537 aa23.01■■□□□ 1.27
Trav13n-2-201ENSMUST00000103622 Ccdc88bQ4QRL3 1481 aa23■■□□□ 1.27
Trav13n-2-201ENSMUST00000103622 Cep170Q6A065 1588 aa22.95■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 Gapvd1Q6PAR5 1458 aa22.95■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 Gpatch8A2A6A1 1505 aa22.94■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 Shroom4Q1W617 1475 aa22.94■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 Arhgef5E9Q7D5 1581 aa22.93■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 Gm156Q58A37 223 aa22.92■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 SynmQ70IV5 1561 aa22.91■■□□□ 1.26
Trav13n-2-201ENSMUST00000103622 Pla2r1Q62028 1487 aa22.89■■□□□ 1.25
Retrieved 100 of 22,080 RNA–protein pairs in 197.4 ms