RNA–Protein interactions for RNA: ENSMUST00000103569.2

Trav3-1-201, Transcript of T cell receptor alpha variable 3-1 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav3-1, Length 385 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1-201ENSMUST00000103569 Gm35339A0A140LHH9 1649 aa33.97■■■■□ 3.03
Trav3-1-201ENSMUST00000103569 NischQ80TM9 1593 aa33.45■■■□□ 2.95
Trav3-1-201ENSMUST00000103569 Abcc8B2RUS7 1588 aa32.4■■■□□ 2.78
Trav3-1-201ENSMUST00000103569 Abcc9P70170 1546 aa32.36■■■□□ 2.77
Trav3-1-201ENSMUST00000103569 ScribQ80U72 1612 aa31.35■■■□□ 2.61
Trav3-1-201ENSMUST00000103569 NacadQ5SWP3 1504 aa30.3■■■□□ 2.44
Trav3-1-201ENSMUST00000103569 Kdm5dQ62240 1548 aa30.26■■■□□ 2.43
Trav3-1-201ENSMUST00000103569 Dcaf1Q80TR8 1506 aa29.74■■■□□ 2.35
Trav3-1-201ENSMUST00000103569 Sycp2Q9CUU3 1500 aa29.73■■■□□ 2.35
Trav3-1-201ENSMUST00000103569 BicraF8VPZ9 1578 aa29.37■■■□□ 2.29
Trav3-1-201ENSMUST00000103569 Rb1cc1Q9ESK9 1588 aa29.13■■■□□ 2.25
Trav3-1-201ENSMUST00000103569 Dnajc5bQ9CQ94 199 aa28.8■■■□□ 2.2
Trav3-1-201ENSMUST00000103569 Baz1aO88379 1555 aa28.71■■■□□ 2.19
Trav3-1-201ENSMUST00000103569 Rhox8Q6VSS7 320 aa28.69■■■□□ 2.18
Trav3-1-201ENSMUST00000103569 Ccdc180J3QNE4 1664 aa28.67■■■□□ 2.18
Trav3-1-201ENSMUST00000103569 Crybg2B7ZCC2 1516 aa28.64■■■□□ 2.17
Trav3-1-201ENSMUST00000103569 Pds5bQ4VA53 1446 aaKnown RBP28.52■■■□□ 2.16
Trav3-1-201ENSMUST00000103569 Thoc2B1AZI6 1594 aaKnown RBP28.37■■■□□ 2.13
Trav3-1-201ENSMUST00000103569 Zcchc6Q5BLK4 1491 aaKnown RBP28.3■■■□□ 2.12
Trav3-1-201ENSMUST00000103569 Atad2bE9Q166 1460 aaKnown RBP28.23■■■□□ 2.11
Trav3-1-201ENSMUST00000103569 Smarca4Q3TKT4 1613 aaKnown RBP27.95■■■□□ 2.06
Trav3-1-201ENSMUST00000103569 Smarca2Q6DIC0 1577 aa27.93■■■□□ 2.06
Trav3-1-201ENSMUST00000103569 Cc2d2aQ8CFW7 1633 aa27.91■■■□□ 2.06
Trav3-1-201ENSMUST00000103569 Ercc6F8VPZ5 1481 aa27.89■■■□□ 2.05
Trav3-1-201ENSMUST00000103569 Cecr2E9Q2Z1 1453 aa27.87■■■□□ 2.05
Trav3-1-201ENSMUST00000103569 Iqgap2Q3UQ44 1575 aa27.82■■■□□ 2.04
Trav3-1-201ENSMUST00000103569 Fam135aQ6NS59 1506 aa27.69■■■□□ 2.02
Trav3-1-201ENSMUST00000103569 Wdr62Q3U3T8 1523 aa27.62■■■□□ 2.01
Trav3-1-201ENSMUST00000103569 Frmpd1A2AKB4 1549 aa27.58■■■□□ 2.01
Trav3-1-201ENSMUST00000103569 Phldb1Q6PDH0 1371 aaKnown RBP27.45■■□□□ 1.98
Trav3-1-201ENSMUST00000103569 Baz1bQ9Z277 1479 aa27.32■■□□□ 1.96
Trav3-1-201ENSMUST00000103569 Rtl1Q7M732 1744 aa27.27■■□□□ 1.96
Trav3-1-201ENSMUST00000103569 Unc13aQ4KUS2 1712 aa27.24■■□□□ 1.95
Trav3-1-201ENSMUST00000103569 Ubl4bQ9CQ84 188 aa27.2■■□□□ 1.94
Trav3-1-201ENSMUST00000103569 CftrP26361 1476 aa27.19■■□□□ 1.94
Trav3-1-201ENSMUST00000103569 Cttnbp2B9EJA2 1648 aa27.14■■□□□ 1.94
Trav3-1-201ENSMUST00000103569 Synj1Q8CHC4 1574 aa27.12■■□□□ 1.93
Trav3-1-201ENSMUST00000103569 Brd4Q9ESU6 1400 aaKnown RBP27.04■■□□□ 1.92
Trav3-1-201ENSMUST00000103569 Mrc2Q64449 1479 aa27.02■■□□□ 1.92
Trav3-1-201ENSMUST00000103569 Ccdc136Q3TVA9 1136 aa26.93■■□□□ 1.9
Trav3-1-201ENSMUST00000103569 Esf1Q3V1V3 845 aaKnown RBP26.64■■□□□ 1.86
Trav3-1-201ENSMUST00000103569 Rsf1E9PWW9 1441 aaKnown RBP26.56■■□□□ 1.84
Trav3-1-201ENSMUST00000103569 Cux2P70298 1426 aa26.55■■□□□ 1.84
Trav3-1-201ENSMUST00000103569 Kif15Q6P9L6 1387 aa26.53■■□□□ 1.84
Trav3-1-201ENSMUST00000103569 Trim41Q5NCC3 630 aa26.47■■□□□ 1.83
Trav3-1-201ENSMUST00000103569 Lrriq1Q0P5X1 1673 aa26.47■■□□□ 1.83
Trav3-1-201ENSMUST00000103569 Lamc3Q9R0B6 1581 aa26.42■■□□□ 1.82
Trav3-1-201ENSMUST00000103569 Kif21aQ9QXL2 1672 aa26.39■■□□□ 1.82
Trav3-1-201ENSMUST00000103569 Npm1Q61937 292 aaKnown RBP26.23■■□□□ 1.79
Trav3-1-201ENSMUST00000103569 Dnajc5P60904 198 aa26.16■■□□□ 1.78
Trav3-1-201ENSMUST00000103569 Cep164Q5DU05 1446 aa26.14■■□□□ 1.77
Trav3-1-201ENSMUST00000103569 TnnQ80Z71 1560 aa26.08■■□□□ 1.77
Trav3-1-201ENSMUST00000103569 Eif4g3Q80XI3 1579 aaKnown RBP26.07■■□□□ 1.76
Trav3-1-201ENSMUST00000103569 Top2bQ64511 1612 aa26.07■■□□□ 1.76
Trav3-1-201ENSMUST00000103569 Golga3P55937 1487 aa26.04■■□□□ 1.76
Trav3-1-201ENSMUST00000103569 Ccdc18Q640L5 1455 aa25.99■■□□□ 1.75
Trav3-1-201ENSMUST00000103569 Urb2E9Q7L1 1524 aaKnown RBP25.98■■□□□ 1.75
Trav3-1-201ENSMUST00000103569 Dhx29Q6PGC1 1365 aaKnown RBP25.98■■□□□ 1.75
Trav3-1-201ENSMUST00000103569 Il27Q8K3I6 234 aa25.94■■□□□ 1.74
Trav3-1-201ENSMUST00000103569 Plb1Q3TTY0 1478 aa25.93■■□□□ 1.74
Trav3-1-201ENSMUST00000103569 Camsap1A2AHC3 1581 aa25.93■■□□□ 1.74
Trav3-1-201ENSMUST00000103569 LrpprcQ6PB66 1392 aaKnown RBP25.92■■□□□ 1.74
Trav3-1-201ENSMUST00000103569 Cngb1E1AZ71 1325 aa25.91■■□□□ 1.74
Trav3-1-201ENSMUST00000103569 Crocc2F6XLV1 1638 aa25.85■■□□□ 1.73
Trav3-1-201ENSMUST00000103569 Shroom2A2ALU4 1481 aa25.84■■□□□ 1.73
Trav3-1-201ENSMUST00000103569 Fmn1Q05860 1466 aa25.78■■□□□ 1.72
Trav3-1-201ENSMUST00000103569 PogzQ8BZH4 1409 aaKnown RBP25.76■■□□□ 1.71
Trav3-1-201ENSMUST00000103569 Ift140E9PY46 1464 aa25.67■■□□□ 1.7
Trav3-1-201ENSMUST00000103569 Duox2A2AQ99 1517 aa25.63■■□□□ 1.69
Trav3-1-201ENSMUST00000103569 Rusc2Q80U22 1514 aa25.63■■□□□ 1.69
Trav3-1-201ENSMUST00000103569 Grin2bQ01097 1482 aa25.56■■□□□ 1.68
Trav3-1-201ENSMUST00000103569 Pabpn1Q8CCS6 302 aaKnown RBP25.53■■□□□ 1.68
Trav3-1-201ENSMUST00000103569 Col17a1Q07563 1470 aa25.53■■□□□ 1.68
Trav3-1-201ENSMUST00000103569 Disp1Q3TDN0 1521 aa25.51■■□□□ 1.67
Trav3-1-201ENSMUST00000103569 Samd9lQ69Z37 1561 aa25.44■■□□□ 1.66
Trav3-1-201ENSMUST00000103569 Setd1bQ8CFT2 1985 aa25.44■■□□□ 1.66
Trav3-1-201ENSMUST00000103569 Efcab5A0JP43 1406 aa25.4■■□□□ 1.66
Trav3-1-201ENSMUST00000103569 Nup160Q9Z0W3 1402 aaKnown RBP25.39■■□□□ 1.66
Trav3-1-201ENSMUST00000103569 Pbrm1Q8BSQ9 1634 aaKnown RBP25.36■■□□□ 1.65
Trav3-1-201ENSMUST00000103569 Ccdc88bQ4QRL3 1481 aa25.35■■□□□ 1.65
Trav3-1-201ENSMUST00000103569 Pelp1Q9DBD5 1123 aaKnown RBP25.35■■□□□ 1.65
Trav3-1-201ENSMUST00000103569 Cc2d2bA0A286YDU8 1405 aa25.34■■□□□ 1.65
Trav3-1-201ENSMUST00000103569 Rad54l2Q99NG0 1466 aa25.27■■□□□ 1.64
Trav3-1-201ENSMUST00000103569 Top2aQ01320 1528 aaKnown RBP25.27■■□□□ 1.64
Trav3-1-201ENSMUST00000103569 NrkQ9R0G8 1455 aa25.24■■□□□ 1.63
Trav3-1-201ENSMUST00000103569 Zcchc11B2RX14 1644 aaKnown RBP25.22■■□□□ 1.63
Trav3-1-201ENSMUST00000103569 Grin2aP35436 1464 aa25.21■■□□□ 1.63
Trav3-1-201ENSMUST00000103569 Magi3Q9EQJ9 1476 aa25.21■■□□□ 1.63
Trav3-1-201ENSMUST00000103569 AqrQ8CFQ3 1481 aaKnown RBP25.15■■□□□ 1.62
Trav3-1-201ENSMUST00000103569 Chic1Q8CBW7 227 aa25.14■■□□□ 1.62
Trav3-1-201ENSMUST00000103569 PtprkP35822 1457 aa25.14■■□□□ 1.61
Trav3-1-201ENSMUST00000103569 Shroom4Q1W617 1475 aa25.11■■□□□ 1.61
Trav3-1-201ENSMUST00000103569 Fgd6Q69ZL1 1399 aa25.08■■□□□ 1.61
Trav3-1-201ENSMUST00000103569 Gpatch8A2A6A1 1505 aa25.05■■□□□ 1.6
Trav3-1-201ENSMUST00000103569 Pla2r1Q62028 1487 aa25.04■■□□□ 1.6
Trav3-1-201ENSMUST00000103569 SynmQ70IV5 1561 aa25.02■■□□□ 1.6
Trav3-1-201ENSMUST00000103569 Adgrl3Q80TS3 1537 aa24.96■■□□□ 1.59
Trav3-1-201ENSMUST00000103569 Cep170Q6A065 1588 aa24.94■■□□□ 1.58
Trav3-1-201ENSMUST00000103569 Gapvd1Q6PAR5 1458 aa24.94■■□□□ 1.58
Trav3-1-201ENSMUST00000103569 AknaQ80VW7 1404 aa24.89■■□□□ 1.58
Retrieved 100 of 22,080 RNA–protein pairs in 220.8 ms