RNA–Protein interactions for RNA: ENSMUST00000102911.9

Slc44a1-201, Transcript of Choline transporter-like protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Slc44a1, Length 3,102 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1-201ENSMUST00000102911 NischQ80TM9 1593 aa30.83■■■□□ 2.53
Slc44a1-201ENSMUST00000102911 Rhox8Q6VSS7 320 aa29.74■■■□□ 2.35
Slc44a1-201ENSMUST00000102911 Abcc9P70170 1546 aa29.74■■■□□ 2.35
Slc44a1-201ENSMUST00000102911 Gm35339A0A140LHH9 1649 aa29.57■■■□□ 2.32
Slc44a1-201ENSMUST00000102911 Abcc8B2RUS7 1588 aa29.08■■■□□ 2.25
Slc44a1-201ENSMUST00000102911 Rtl1Q7M732 1744 aa28.16■■■□□ 2.1
Slc44a1-201ENSMUST00000102911 Ccdc180J3QNE4 1664 aa27.98■■■□□ 2.07
Slc44a1-201ENSMUST00000102911 Rpgrip1Q9EPQ2 1331 aa27.72■■■□□ 2.03
Slc44a1-201ENSMUST00000102911 Ccdc136Q3TVA9 1136 aa27.58■■■□□ 2.01
Slc44a1-201ENSMUST00000102911 Ehmt2Q9Z148 1263 aaKnown RBP27.54■■■□□ 2
Slc44a1-201ENSMUST00000102911 Zcchc6Q5BLK4 1491 aaKnown RBP27.42■■□□□ 1.98
Slc44a1-201ENSMUST00000102911 Acin1Q9JIX8 1338 aaKnown RBP27.09■■□□□ 1.93
Slc44a1-201ENSMUST00000102911 Rb1cc1Q9ESK9 1588 aa27.03■■□□□ 1.92
Slc44a1-201ENSMUST00000102911 ScribQ80U72 1612 aa26.98■■□□□ 1.91
Slc44a1-201ENSMUST00000102911 HrcG5E8J6 738 aa26.93■■□□□ 1.9
Slc44a1-201ENSMUST00000102911 Trim41Q5NCC3 630 aa26.82■■□□□ 1.88
Slc44a1-201ENSMUST00000102911 Dcaf1Q80TR8 1506 aa26.81■■□□□ 1.88
Slc44a1-201ENSMUST00000102911 Pcgf6Q99NA9 353 aa26.65■■□□□ 1.86
Slc44a1-201ENSMUST00000102911 Kdm5dQ62240 1548 aa26.65■■□□□ 1.86
Slc44a1-201ENSMUST00000102911 Baz1aO88379 1555 aa26.59■■□□□ 1.85
Slc44a1-201ENSMUST00000102911 NacadQ5SWP3 1504 aa26.31■■□□□ 1.8
Slc44a1-201ENSMUST00000102911 Cngb1E1AZ71 1325 aa26.31■■□□□ 1.8
Slc44a1-201ENSMUST00000102911 Gab3Q8BSM5 595 aa26.28■■□□□ 1.8
Slc44a1-201ENSMUST00000102911 Chic1Q8CBW7 227 aa26.06■■□□□ 1.76
Slc44a1-201ENSMUST00000102911 Cep164Q5DU05 1446 aa26■■□□□ 1.75
Slc44a1-201ENSMUST00000102911 Supt5hO55201 1082 aaKnown RBP25.99■■□□□ 1.75
Slc44a1-201ENSMUST00000102911 Smarca2Q6DIC0 1577 aa25.97■■□□□ 1.75
Slc44a1-201ENSMUST00000102911 Rsf1E9PWW9 1441 aaKnown RBP25.8■■□□□ 1.72
Slc44a1-201ENSMUST00000102911 Esf1Q3V1V3 845 aaKnown RBP25.79■■□□□ 1.72
Slc44a1-201ENSMUST00000102911 Crybg2B7ZCC2 1516 aa25.76■■□□□ 1.72
Slc44a1-201ENSMUST00000102911 Neurod1Q60867 357 aa25.73■■□□□ 1.71
Slc44a1-201ENSMUST00000102911 Sycp2Q9CUU3 1500 aa25.73■■□□□ 1.71
Slc44a1-201ENSMUST00000102911 Zeb1Q64318 1117 aa25.69■■□□□ 1.7
Slc44a1-201ENSMUST00000102911 Cecr2E9Q2Z1 1453 aa25.67■■□□□ 1.7
Slc44a1-201ENSMUST00000102911 Ccdc88bQ4QRL3 1481 aa25.61■■□□□ 1.69
Slc44a1-201ENSMUST00000102911 Brd4Q9ESU6 1400 aaKnown RBP25.6■■□□□ 1.69
Slc44a1-201ENSMUST00000102911 Mier1Q5UAK0 511 aa25.47■■□□□ 1.67
Slc44a1-201ENSMUST00000102911 Golga3P55937 1487 aa25.43■■□□□ 1.66
Slc44a1-201ENSMUST00000102911 Synj1Q8CHC4 1574 aa25.36■■□□□ 1.65
Slc44a1-201ENSMUST00000102911 UbtfP25976 765 aaKnown RBP25.3■■□□□ 1.64
Slc44a1-201ENSMUST00000102911 Myt1lP97500 1187 aa25.25■■□□□ 1.63
Slc44a1-201ENSMUST00000102911 NefmP08553 848 aa25.21■■□□□ 1.63
Slc44a1-201ENSMUST00000102911 Las1lA2BE28 776 aaKnown RBP25.2■■□□□ 1.63
Slc44a1-201ENSMUST00000102911 BicraF8VPZ9 1578 aa25.16■■□□□ 1.62
Slc44a1-201ENSMUST00000102911 CftrP26361 1476 aa25.16■■□□□ 1.62
Slc44a1-201ENSMUST00000102911 Sall2Q9QX96 1004 aa25.06■■□□□ 1.6
Slc44a1-201ENSMUST00000102911 1700123L14RikQ3V2K7 440 aa25.02■■□□□ 1.6
Slc44a1-201ENSMUST00000102911 Npm2Q80W85 207 aa24.99■■□□□ 1.59
Slc44a1-201ENSMUST00000102911 Wdr66E9Q743 1299 aa24.97■■□□□ 1.59
Slc44a1-201ENSMUST00000102911 Ppargc1bQ8VHJ7 1014 aa24.95■■□□□ 1.58
Slc44a1-201ENSMUST00000102911 Csrnp3P59055 597 aa24.92■■□□□ 1.58
Slc44a1-201ENSMUST00000102911 Cc2d2aQ8CFW7 1633 aa24.84■■□□□ 1.57
Slc44a1-201ENSMUST00000102911 Anks4bQ8K3X6 423 aa24.84■■□□□ 1.57
Slc44a1-201ENSMUST00000102911 Top2bQ64511 1612 aa24.82■■□□□ 1.56
Slc44a1-201ENSMUST00000102911 Cttnbp2B9EJA2 1648 aa24.79■■□□□ 1.56
Slc44a1-201ENSMUST00000102911 Aebp2Q9Z248 504 aaKnown RBP24.77■■□□□ 1.56
Slc44a1-201ENSMUST00000102911 Plekhg3Q4VAC9 1341 aa24.77■■□□□ 1.56
Slc44a1-201ENSMUST00000102911 Smarca4Q3TKT4 1613 aaKnown RBP24.68■■□□□ 1.54
Slc44a1-201ENSMUST00000102911 Rapgef2Q8CHG7 1496 aa24.67■■□□□ 1.54
Slc44a1-201ENSMUST00000102911 Il27Q8K3I6 234 aa24.65■■□□□ 1.54
Slc44a1-201ENSMUST00000102911 Cep162Q6ZQ06 1403 aa24.63■■□□□ 1.53
Slc44a1-201ENSMUST00000102911 Fmn1Q05860 1466 aa24.61■■□□□ 1.53
Slc44a1-201ENSMUST00000102911 Ap3b1Q9Z1T1 1105 aa24.59■■□□□ 1.53
Slc44a1-201ENSMUST00000102911 Clip1Q922J3 1391 aa24.55■■□□□ 1.52
Slc44a1-201ENSMUST00000102911 Top2aQ01320 1528 aaKnown RBP24.5■■□□□ 1.51
Slc44a1-201ENSMUST00000102911 CenpbP27790 599 aa24.49■■□□□ 1.51
Slc44a1-201ENSMUST00000102911 TonslQ6NZL6 1363 aa24.44■■□□□ 1.5
Slc44a1-201ENSMUST00000102911 Cdk11bP24788 784 aaKnown RBP24.43■■□□□ 1.5
Slc44a1-201ENSMUST00000102911 Iqgap2Q3UQ44 1575 aa24.4■■□□□ 1.5
Slc44a1-201ENSMUST00000102911 Aplp2Q06335 707 aa24.39■■□□□ 1.5
Slc44a1-201ENSMUST00000102911 Nop58Q6DFW4 536 aaKnown RBP24.38■■□□□ 1.49
Slc44a1-201ENSMUST00000102911 Gm38655A0A286YDK6 273 aa24.38■■□□□ 1.49
Slc44a1-201ENSMUST00000102911 ClspnQ80YR7 1315 aa24.37■■□□□ 1.49
Slc44a1-201ENSMUST00000102911 Eid3Q3V124 375 aa24.36■■□□□ 1.49
Slc44a1-201ENSMUST00000102911 Myt1Q8CFC2 1127 aa24.3■■□□□ 1.48
Slc44a1-201ENSMUST00000102911 Atad2bE9Q166 1460 aaKnown RBP24.18■■□□□ 1.46
Slc44a1-201ENSMUST00000102911 PtprkP35822 1457 aa24.16■■□□□ 1.46
Slc44a1-201ENSMUST00000102911 Kif15Q6P9L6 1387 aa24.11■■□□□ 1.45
Slc44a1-201ENSMUST00000102911 Setd5Q5XJV7 1441 aa24.09■■□□□ 1.45
Slc44a1-201ENSMUST00000102911 Arhgap35Q91YM2 1499 aa24.08■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Mapk8ip2Q9ERE9 830 aa24.07■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Lmod2Q3UHZ5 550 aa24.05■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Eea1Q8BL66 1411 aa24.04■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Fam50aQ9WV03 339 aaKnown RBP24.04■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Ncapd3Q6ZQK0 1506 aa24.03■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Pds5bQ4VA53 1446 aaKnown RBP24.02■■□□□ 1.44
Slc44a1-201ENSMUST00000102911 Arap1Q4LDD4 1452 aa23.99■■□□□ 1.43
Slc44a1-201ENSMUST00000102911 Frmpd1A2AKB4 1549 aa23.95■■□□□ 1.42
Slc44a1-201ENSMUST00000102911 DiexfQ8BTT6 772 aaKnown RBP23.95■■□□□ 1.42
Slc44a1-201ENSMUST00000102911 Eif4g1Q6NZJ6 1600 aaKnown RBP23.94■■□□□ 1.42
Slc44a1-201ENSMUST00000102911 BlmO88700 1416 aa23.91■■□□□ 1.42
Slc44a1-201ENSMUST00000102911 TnnQ80Z71 1560 aa23.85■■□□□ 1.41
Slc44a1-201ENSMUST00000102911 NrkQ9R0G8 1455 aa23.82■■□□□ 1.4
Slc44a1-201ENSMUST00000102911 Shroom4Q1W617 1475 aa23.78■■□□□ 1.4
Slc44a1-201ENSMUST00000102911 NclP09405 707 aaKnown RBP23.78■■□□□ 1.4
Slc44a1-201ENSMUST00000102911 Wdr62Q3U3T8 1523 aa23.78■■□□□ 1.4
Slc44a1-201ENSMUST00000102911 Fam71e1A1L3C1 212 aa23.77■■□□□ 1.4
Slc44a1-201ENSMUST00000102911 Arhgef5E9Q7D5 1581 aa23.76■■□□□ 1.39
Slc44a1-201ENSMUST00000102911 SafbD3YXK2 937 aaKnown RBP23.76■■□□□ 1.39
Slc44a1-201ENSMUST00000102911 Npm1Q61937 292 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 59.5 ms