RNA–Protein interactions for RNA: ENSMUST00000093975.11

Rffl-204, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

TSL 1 (best) BASIC

Gene Rffl, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-204ENSMUST00000093975 NischQ80TM9 1593 aa17.66■□□□□ 0.42
Rffl-204ENSMUST00000093975 Rhox8Q6VSS7 320 aa17.17■□□□□ 0.34
Rffl-204ENSMUST00000093975 Abcc9P70170 1546 aa17.09■□□□□ 0.33
Rffl-204ENSMUST00000093975 Gm35339A0A140LHH9 1649 aa16.9■□□□□ 0.3
Rffl-204ENSMUST00000093975 Rtl1Q7M732 1744 aa16.68■□□□□ 0.26
Rffl-204ENSMUST00000093975 Abcc8B2RUS7 1588 aa16.6■□□□□ 0.25
Rffl-204ENSMUST00000093975 Ccdc180J3QNE4 1664 aa16.57■□□□□ 0.24
Rffl-204ENSMUST00000093975 Rpgrip1Q9EPQ2 1331 aa16.55■□□□□ 0.24
Rffl-204ENSMUST00000093975 Ehmt2Q9Z148 1263 aaKnown RBP16.18■□□□□ 0.18
Rffl-204ENSMUST00000093975 Acin1Q9JIX8 1338 aaKnown RBP16.17■□□□□ 0.18
Rffl-204ENSMUST00000093975 Zcchc6Q5BLK4 1491 aaKnown RBP16.06■□□□□ 0.16
Rffl-204ENSMUST00000093975 HrcG5E8J6 738 aa15.85■□□□□ 0.13
Rffl-204ENSMUST00000093975 Ccdc136Q3TVA9 1136 aa15.85■□□□□ 0.13
Rffl-204ENSMUST00000093975 Pcgf6Q99NA9 353 aa15.77■□□□□ 0.11
Rffl-204ENSMUST00000093975 Dcaf1Q80TR8 1506 aa15.74■□□□□ 0.11
Rffl-204ENSMUST00000093975 Trim41Q5NCC3 630 aa15.61■□□□□ 0.09
Rffl-204ENSMUST00000093975 Rb1cc1Q9ESK9 1588 aa15.51■□□□□ 0.07
Rffl-204ENSMUST00000093975 Supt5hO55201 1082 aaKnown RBP15.45■□□□□ 0.06
Rffl-204ENSMUST00000093975 Baz1aO88379 1555 aa15.29■□□□□ 0.04
Rffl-204ENSMUST00000093975 ScribQ80U72 1612 aa15.26■□□□□ 0.03
Rffl-204ENSMUST00000093975 Cep164Q5DU05 1446 aa15.25■□□□□ 0.03
Rffl-204ENSMUST00000093975 Zeb1Q64318 1117 aa15.24■□□□□ 0.03
Rffl-204ENSMUST00000093975 Gab3Q8BSM5 595 aa15.19■□□□□ 0.02
Rffl-204ENSMUST00000093975 Neurod1Q60867 357 aa15.18■□□□□ 0.02
Rffl-204ENSMUST00000093975 Cngb1E1AZ71 1325 aa15.14■□□□□ 0.01
Rffl-204ENSMUST00000093975 Kdm5dQ62240 1548 aa15.14■□□□□ 0.01
Rffl-204ENSMUST00000093975 NefmP08553 848 aa15.05■□□□□ -0
Rffl-204ENSMUST00000093975 Chic1Q8CBW7 227 aa15.04■□□□□ -0
Rffl-204ENSMUST00000093975 Mier1Q5UAK0 511 aa15□□□□□ -0.01
Rffl-204ENSMUST00000093975 Las1lA2BE28 776 aaKnown RBP14.98□□□□□ -0.01
Rffl-204ENSMUST00000093975 Rsf1E9PWW9 1441 aaKnown RBP14.96□□□□□ -0.01
Rffl-204ENSMUST00000093975 NacadQ5SWP3 1504 aa14.95□□□□□ -0.02
Rffl-204ENSMUST00000093975 Smarca2Q6DIC0 1577 aa14.95□□□□□ -0.02
Rffl-204ENSMUST00000093975 Sall2Q9QX96 1004 aa14.94□□□□□ -0.02
Rffl-204ENSMUST00000093975 Wdr66E9Q743 1299 aa14.83□□□□□ -0.04
Rffl-204ENSMUST00000093975 Crybg2B7ZCC2 1516 aa14.81□□□□□ -0.04
Rffl-204ENSMUST00000093975 Ccdc88bQ4QRL3 1481 aa14.8□□□□□ -0.04
Rffl-204ENSMUST00000093975 UbtfP25976 765 aaKnown RBP14.76□□□□□ -0.05
Rffl-204ENSMUST00000093975 Brd4Q9ESU6 1400 aaKnown RBP14.76□□□□□ -0.05
Rffl-204ENSMUST00000093975 Esf1Q3V1V3 845 aaKnown RBP14.74□□□□□ -0.05
Rffl-204ENSMUST00000093975 Anks4bQ8K3X6 423 aa14.72□□□□□ -0.05
Rffl-204ENSMUST00000093975 Golga3P55937 1487 aa14.71□□□□□ -0.05
Rffl-204ENSMUST00000093975 Csrnp3P59055 597 aa14.71□□□□□ -0.05
Rffl-204ENSMUST00000093975 1700123L14RikQ3V2K7 440 aa14.69□□□□□ -0.06
Rffl-204ENSMUST00000093975 Aebp2Q9Z248 504 aaKnown RBP14.65□□□□□ -0.06
Rffl-204ENSMUST00000093975 Ppargc1bQ8VHJ7 1014 aa14.65□□□□□ -0.06
Rffl-204ENSMUST00000093975 Cdk11bP24788 784 aaKnown RBP14.62□□□□□ -0.07
Rffl-204ENSMUST00000093975 Cecr2E9Q2Z1 1453 aa14.62□□□□□ -0.07
Rffl-204ENSMUST00000093975 Nop58Q6DFW4 536 aaKnown RBP14.6□□□□□ -0.07
Rffl-204ENSMUST00000093975 Sycp2Q9CUU3 1500 aa14.6□□□□□ -0.07
Rffl-204ENSMUST00000093975 Myt1lP97500 1187 aa14.56□□□□□ -0.08
Rffl-204ENSMUST00000093975 ClspnQ80YR7 1315 aa14.56□□□□□ -0.08
Rffl-204ENSMUST00000093975 Synj1Q8CHC4 1574 aa14.54□□□□□ -0.08
Rffl-204ENSMUST00000093975 TonslQ6NZL6 1363 aa14.46□□□□□ -0.09
Rffl-204ENSMUST00000093975 CenpbP27790 599 aa14.44□□□□□ -0.1
Rffl-204ENSMUST00000093975 Aplp2Q06335 707 aa14.43□□□□□ -0.1
Rffl-204ENSMUST00000093975 Gm38655A0A286YDK6 273 aa14.42□□□□□ -0.1
Rffl-204ENSMUST00000093975 CftrP26361 1476 aa14.42□□□□□ -0.1
Rffl-204ENSMUST00000093975 Npm2Q80W85 207 aa14.4□□□□□ -0.1
Rffl-204ENSMUST00000093975 Plekhg3Q4VAC9 1341 aa14.35□□□□□ -0.11
Rffl-204ENSMUST00000093975 Rapgef2Q8CHG7 1496 aa14.35□□□□□ -0.11
Rffl-204ENSMUST00000093975 Top2bQ64511 1612 aa14.33□□□□□ -0.11
Rffl-204ENSMUST00000093975 Cep162Q6ZQ06 1403 aa14.3□□□□□ -0.12
Rffl-204ENSMUST00000093975 Cc2d2aQ8CFW7 1633 aa14.29□□□□□ -0.12
Rffl-204ENSMUST00000093975 Myt1Q8CFC2 1127 aa14.27□□□□□ -0.12
Rffl-204ENSMUST00000093975 Clip1Q922J3 1391 aa14.27□□□□□ -0.13
Rffl-204ENSMUST00000093975 Cttnbp2B9EJA2 1648 aa14.23□□□□□ -0.13
Rffl-204ENSMUST00000093975 Fmn1Q05860 1466 aa14.22□□□□□ -0.13
Rffl-204ENSMUST00000093975 BicraF8VPZ9 1578 aa14.2□□□□□ -0.14
Rffl-204ENSMUST00000093975 Eid3Q3V124 375 aa14.2□□□□□ -0.14
Rffl-204ENSMUST00000093975 Top2aQ01320 1528 aaKnown RBP14.18□□□□□ -0.14
Rffl-204ENSMUST00000093975 Ap3b1Q9Z1T1 1105 aa14.14□□□□□ -0.15
Rffl-204ENSMUST00000093975 Hnrnpul2Q00PI9 745 aaKnown RBP14.1□□□□□ -0.15
Rffl-204ENSMUST00000093975 Ncapd3Q6ZQK0 1506 aa14.1□□□□□ -0.15
Rffl-204ENSMUST00000093975 Tnnt3Q9QZ47 272 aa14.09□□□□□ -0.15
Rffl-204ENSMUST00000093975 SafbD3YXK2 937 aaKnown RBP14.08□□□□□ -0.16
Rffl-204ENSMUST00000093975 Mapk8ip2Q9ERE9 830 aa14.08□□□□□ -0.16
Rffl-204ENSMUST00000093975 Smarca4Q3TKT4 1613 aaKnown RBP14.07□□□□□ -0.16
Rffl-204ENSMUST00000093975 Fam71e1A1L3C1 212 aa14.03□□□□□ -0.16
Rffl-204ENSMUST00000093975 Il27Q8K3I6 234 aa13.99□□□□□ -0.17
Rffl-204ENSMUST00000093975 Eea1Q8BL66 1411 aa13.97□□□□□ -0.17
Rffl-204ENSMUST00000093975 NclP09405 707 aaKnown RBP13.97□□□□□ -0.17
Rffl-204ENSMUST00000093975 Fam50aQ9WV03 339 aaKnown RBP13.94□□□□□ -0.18
Rffl-204ENSMUST00000093975 Setd5Q5XJV7 1441 aa13.94□□□□□ -0.18
Rffl-204ENSMUST00000093975 Arap1Q4LDD4 1452 aa13.92□□□□□ -0.18
Rffl-204ENSMUST00000093975 Arhgap35Q91YM2 1499 aa13.91□□□□□ -0.18
Rffl-204ENSMUST00000093975 Stra8P70278 393 aa13.91□□□□□ -0.18
Rffl-204ENSMUST00000093975 Eif4g1Q6NZJ6 1600 aaKnown RBP13.9□□□□□ -0.18
Rffl-204ENSMUST00000093975 Iqgap2Q3UQ44 1575 aa13.87□□□□□ -0.19
Rffl-204ENSMUST00000093975 Ccdc18Q640L5 1455 aa13.86□□□□□ -0.19
Rffl-204ENSMUST00000093975 Baz1bQ9Z277 1479 aa13.86□□□□□ -0.19
Rffl-204ENSMUST00000093975 PtprkP35822 1457 aa13.85□□□□□ -0.19
Rffl-204ENSMUST00000093975 Anp32aO35381 247 aa13.85□□□□□ -0.19
Rffl-204ENSMUST00000093975 BlmO88700 1416 aa13.85□□□□□ -0.19
Rffl-204ENSMUST00000093975 Slc24a1Q91WD8 1130 aa13.83□□□□□ -0.2
Rffl-204ENSMUST00000093975 Lmod2Q3UHZ5 550 aa13.83□□□□□ -0.2
Rffl-204ENSMUST00000093975 DiexfQ8BTT6 772 aaKnown RBP13.83□□□□□ -0.2
Rffl-204ENSMUST00000093975 Kdm5bQ80Y84 1544 aa13.83□□□□□ -0.2
Rffl-204ENSMUST00000093975 Arhgef5E9Q7D5 1581 aa13.82□□□□□ -0.2
Rffl-204ENSMUST00000093975 Rpap1Q80TE0 1409 aa13.82□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 1707.4 ms