RNA–Protein interactions for RNA: ENSMUST00000087316.5

Capn6-201, Transcript of Calpain-6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Capn6, Length 3,561 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6-201ENSMUST00000087316 Gm35339A0A140LHH9 1649 aa10.65□□□□□ -0.7
Capn6-201ENSMUST00000087316 NischQ80TM9 1593 aa10.62□□□□□ -0.71
Capn6-201ENSMUST00000087316 Abcc9P70170 1546 aa10.27□□□□□ -0.77
Capn6-201ENSMUST00000087316 Abcc8B2RUS7 1588 aa10.25□□□□□ -0.77
Capn6-201ENSMUST00000087316 Rtl1Q7M732 1744 aa9.86□□□□□ -0.83
Capn6-201ENSMUST00000087316 ScribQ80U72 1612 aa9.86□□□□□ -0.83
Capn6-201ENSMUST00000087316 Kdm5dQ62240 1548 aa9.54□□□□□ -0.88
Capn6-201ENSMUST00000087316 Ccdc180J3QNE4 1664 aa9.51□□□□□ -0.89
Capn6-201ENSMUST00000087316 NacadQ5SWP3 1504 aa9.49□□□□□ -0.89
Capn6-201ENSMUST00000087316 Dcaf1Q80TR8 1506 aa9.37□□□□□ -0.91
Capn6-201ENSMUST00000087316 Rhox8Q6VSS7 320 aa9.35□□□□□ -0.91
Capn6-201ENSMUST00000087316 Zcchc6Q5BLK4 1491 aaKnown RBP9.34□□□□□ -0.91
Capn6-201ENSMUST00000087316 Sycp2Q9CUU3 1500 aa9.32□□□□□ -0.92
Capn6-201ENSMUST00000087316 Rb1cc1Q9ESK9 1588 aa9.26□□□□□ -0.93
Capn6-201ENSMUST00000087316 BicraF8VPZ9 1578 aa9.23□□□□□ -0.93
Capn6-201ENSMUST00000087316 Baz1aO88379 1555 aa9.11□□□□□ -0.95
Capn6-201ENSMUST00000087316 Crybg2B7ZCC2 1516 aa9□□□□□ -0.97
Capn6-201ENSMUST00000087316 Dnajc5bQ9CQ94 199 aa8.96□□□□□ -0.97
Capn6-201ENSMUST00000087316 Ube2uB1AUC4 352 aa8.94□□□□□ -0.98
Capn6-201ENSMUST00000087316 Cecr2E9Q2Z1 1453 aa8.9□□□□□ -0.99
Capn6-201ENSMUST00000087316 Smarca2Q6DIC0 1577 aa8.87□□□□□ -0.99
Capn6-201ENSMUST00000087316 Pds5bQ4VA53 1446 aaKnown RBP8.86□□□□□ -0.99
Capn6-201ENSMUST00000087316 Atad2bE9Q166 1460 aaKnown RBP8.82□□□□□ -1
Capn6-201ENSMUST00000087316 Smarca4Q3TKT4 1613 aaKnown RBP8.79□□□□□ -1
Capn6-201ENSMUST00000087316 Ccdc136Q3TVA9 1136 aa8.78□□□□□ -1
Capn6-201ENSMUST00000087316 Thoc2B1AZI6 1594 aaKnown RBP8.78□□□□□ -1
Capn6-201ENSMUST00000087316 Iqgap2Q3UQ44 1575 aa8.75□□□□□ -1.01
Capn6-201ENSMUST00000087316 Cc2d2aQ8CFW7 1633 aa8.68□□□□□ -1.02
Capn6-201ENSMUST00000087316 Ercc6F8VPZ5 1481 aa8.68□□□□□ -1.02
Capn6-201ENSMUST00000087316 Frmpd1A2AKB4 1549 aa8.67□□□□□ -1.02
Capn6-201ENSMUST00000087316 Synj1Q8CHC4 1574 aa8.66□□□□□ -1.02
Capn6-201ENSMUST00000087316 Rpgrip1Q9EPQ2 1331 aa8.66□□□□□ -1.02
Capn6-201ENSMUST00000087316 CftrP26361 1476 aa8.65□□□□□ -1.02
Capn6-201ENSMUST00000087316 Wdr62Q3U3T8 1523 aa8.65□□□□□ -1.03
Capn6-201ENSMUST00000087316 Brd4Q9ESU6 1400 aaKnown RBP8.6□□□□□ -1.03
Capn6-201ENSMUST00000087316 Mapk8ip2Q9ERE9 830 aa8.58□□□□□ -1.04
Capn6-201ENSMUST00000087316 Cttnbp2B9EJA2 1648 aa8.58□□□□□ -1.04
Capn6-201ENSMUST00000087316 Fam135aQ6NS59 1506 aa8.58□□□□□ -1.04
Capn6-201ENSMUST00000087316 Unc13aQ4KUS2 1712 aa8.56□□□□□ -1.04
Capn6-201ENSMUST00000087316 Phldb1Q6PDH0 1371 aaKnown RBP8.55□□□□□ -1.04
Capn6-201ENSMUST00000087316 HrcG5E8J6 738 aa8.54□□□□□ -1.04
Capn6-201ENSMUST00000087316 Ubl4bQ9CQ84 188 aa8.52□□□□□ -1.04
Capn6-201ENSMUST00000087316 Esf1Q3V1V3 845 aaKnown RBP8.52□□□□□ -1.05
Capn6-201ENSMUST00000087316 Trim41Q5NCC3 630 aa8.51□□□□□ -1.05
Capn6-201ENSMUST00000087316 Top2bQ64511 1612 aa8.5□□□□□ -1.05
Capn6-201ENSMUST00000087316 Kcna4Q61423 654 aa8.42□□□□□ -1.06
Capn6-201ENSMUST00000087316 Cngb1E1AZ71 1325 aa8.41□□□□□ -1.06
Capn6-201ENSMUST00000087316 Acin1Q9JIX8 1338 aaKnown RBP8.4□□□□□ -1.06
Capn6-201ENSMUST00000087316 Chic1Q8CBW7 227 aa8.4□□□□□ -1.06
Capn6-201ENSMUST00000087316 Kif15Q6P9L6 1387 aa8.4□□□□□ -1.07
Capn6-201ENSMUST00000087316 Mrc2Q64449 1479 aa8.39□□□□□ -1.07
Capn6-201ENSMUST00000087316 Eif4g1Q6NZJ6 1600 aaKnown RBP8.39□□□□□ -1.07
Capn6-201ENSMUST00000087316 Cep164Q5DU05 1446 aa8.38□□□□□ -1.07
Capn6-201ENSMUST00000087316 Rsf1E9PWW9 1441 aaKnown RBP8.37□□□□□ -1.07
Capn6-201ENSMUST00000087316 Golga3P55937 1487 aa8.37□□□□□ -1.07
Capn6-201ENSMUST00000087316 Cux2P70298 1426 aa8.37□□□□□ -1.07
Capn6-201ENSMUST00000087316 Lamc3Q9R0B6 1581 aa8.34□□□□□ -1.07
Capn6-201ENSMUST00000087316 Baz1bQ9Z277 1479 aa8.33□□□□□ -1.08
Capn6-201ENSMUST00000087316 Il27Q8K3I6 234 aa8.31□□□□□ -1.08
Capn6-201ENSMUST00000087316 Ppargc1bQ8VHJ7 1014 aa8.3□□□□□ -1.08
Capn6-201ENSMUST00000087316 Ehmt2Q9Z148 1263 aaKnown RBP8.28□□□□□ -1.08
Capn6-201ENSMUST00000087316 Kif21aQ9QXL2 1672 aa8.28□□□□□ -1.08
Capn6-201ENSMUST00000087316 TnnQ80Z71 1560 aa8.27□□□□□ -1.09
Capn6-201ENSMUST00000087316 Npm1Q61937 292 aaKnown RBP8.26□□□□□ -1.09
Capn6-201ENSMUST00000087316 Ccdc88bQ4QRL3 1481 aa8.26□□□□□ -1.09
Capn6-201ENSMUST00000087316 Lrriq1Q0P5X1 1673 aa8.23□□□□□ -1.09
Capn6-201ENSMUST00000087316 Fmn1Q05860 1466 aa8.23□□□□□ -1.09
Capn6-201ENSMUST00000087316 Camsap1A2AHC3 1581 aa8.22□□□□□ -1.09
Capn6-201ENSMUST00000087316 Plppr3Q7TPB0 716 aa8.2□□□□□ -1.1
Capn6-201ENSMUST00000087316 Dhx29Q6PGC1 1365 aaKnown RBP8.2□□□□□ -1.1
Capn6-201ENSMUST00000087316 Ccdc18Q640L5 1455 aa8.19□□□□□ -1.1
Capn6-201ENSMUST00000087316 LrpprcQ6PB66 1392 aaKnown RBP8.18□□□□□ -1.1
Capn6-201ENSMUST00000087316 Plb1Q3TTY0 1478 aa8.17□□□□□ -1.1
Capn6-201ENSMUST00000087316 Urb2E9Q7L1 1524 aaKnown RBP8.16□□□□□ -1.1
Capn6-201ENSMUST00000087316 Top2aQ01320 1528 aaKnown RBP8.15□□□□□ -1.1
Capn6-201ENSMUST00000087316 PogzQ8BZH4 1409 aaKnown RBP8.14□□□□□ -1.11
Capn6-201ENSMUST00000087316 Grin2bQ01097 1482 aa8.12□□□□□ -1.11
Capn6-201ENSMUST00000087316 Crocc2F6XLV1 1638 aa8.12□□□□□ -1.11
Capn6-201ENSMUST00000087316 Duox2A2AQ99 1517 aa8.12□□□□□ -1.11
Capn6-201ENSMUST00000087316 PtprkP35822 1457 aa8.1□□□□□ -1.11
Capn6-201ENSMUST00000087316 Rapgef2Q8CHG7 1496 aa8.09□□□□□ -1.11
Capn6-201ENSMUST00000087316 Kdm5bQ80Y84 1544 aa8.09□□□□□ -1.11
Capn6-201ENSMUST00000087316 TchhA0A0B4J1F9 1599 aa8.08□□□□□ -1.12
Capn6-201ENSMUST00000087316 Samd9lQ69Z37 1561 aa8.08□□□□□ -1.12
Capn6-201ENSMUST00000087316 Eif4g3Q80XI3 1579 aaKnown RBP8.07□□□□□ -1.12
Capn6-201ENSMUST00000087316 Gab3Q8BSM5 595 aa8.06□□□□□ -1.12
Capn6-201ENSMUST00000087316 Rad54l2Q99NG0 1466 aa8.06□□□□□ -1.12
Capn6-201ENSMUST00000087316 Disp1Q3TDN0 1521 aa8.05□□□□□ -1.12
Capn6-201ENSMUST00000087316 Phf23Q8BSN5 401 aa8.04□□□□□ -1.12
Capn6-201ENSMUST00000087316 Efcab5A0JP43 1406 aa8.03□□□□□ -1.12
Capn6-201ENSMUST00000087316 Erich3F6QRE9 1637 aa8.03□□□□□ -1.12
Capn6-201ENSMUST00000087316 Setd1bQ8CFT2 1985 aa8.02□□□□□ -1.12
Capn6-201ENSMUST00000087316 NrkQ9R0G8 1455 aa8.02□□□□□ -1.13
Capn6-201ENSMUST00000087316 Gpatch8A2A6A1 1505 aa8.02□□□□□ -1.13
Capn6-201ENSMUST00000087316 Ift140E9PY46 1464 aa8.02□□□□□ -1.13
Capn6-201ENSMUST00000087316 Shroom4Q1W617 1475 aa8.01□□□□□ -1.13
Capn6-201ENSMUST00000087316 Rusc2Q80U22 1514 aa7.99□□□□□ -1.13
Capn6-201ENSMUST00000087316 Magi3Q9EQJ9 1476 aa7.99□□□□□ -1.13
Capn6-201ENSMUST00000087316 Nup160Q9Z0W3 1402 aaKnown RBP7.98□□□□□ -1.13
Capn6-201ENSMUST00000087316 Npm2Q80W85 207 aa7.97□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms